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The map label for this gene is yegM [C]

Identifier: 117918829

GI number: 117918829

Start: 409534

End: 410652

Strand: Reverse

Name: yegM [C]

Synonym: Shewana3_0372

Alternate gene names: 117918829

Gene position: 410652-409534 (Counterclockwise)

Preceding gene: 117918830

Following gene: 117918828

Centisome position: 8.26

GC content: 45.93

Gene sequence:

>1119_bases
ATGAAAAAATGGACTCTAAGTATGCTAGCGATCGCTGTACTTGCCTTTGGCTCAGTGATCGGCTTTAACCTGATGGTAAA
AAGTAAAATCGCCGAGGCAATCGCCAATATGCCAGAGGCTGAGTTTCCTGTAACAGCCATGACATTAGATATGCAAAAGT
GGCAACCCACAATTGATGCGATTGGCTTTGTTGAGCCGCATCAAGGGGTAACCATCTCCAACGAATTAGCAGGACGCGTC
ACCAGCATTAATTTTGAAAACGGTAGCCGAGTGGAAAAAGGCCAACTACTGGCCGAACTCGATGCAAAAGTCGAAAGAGC
CAACCTTAAAAGCAAAATGGTACAACTGCCCGCCGCTGAAGCCGACTTTAAACGCCTATCAAAACTCTATGCGCAAAAGT
CAGTCTCTAAACAGGATTTAGACAATAGTGAATCTAAATATCTGGCCTTACAGGCGGATATTGAAAGCTTAAAAGCCACT
ATCGAGCGCCGTGAAATCAGTGCGCCTTTCAGTGGTTTAGTGGGTATTCGTAACATTAACTTAGGTGAATATCTTCAGCC
TGGTACCGATATTGTGCGCCTTGAAGATATCAGCACAATGAAAATCCGCTTTACCATTCCGCAAACCCAATTACCTCGCA
TTGCTGTAGGCCAAAAAATCCATGTGTTTGTGGATTCTTATCCTGAGCAACCCTTCGAAGGTGAAATTGCCGCGATTGAA
CCCGCCGTGTTTTACCAAAGCGGTCTGATCCAAGTGCAAGCACGCATTCCGAACGATAACGCCAAACTGCGTAGCGGTAT
GTTTGCCCGAGTCTCCATCCTGTTACCTGAACTAGATAACCAGTTTGTACTGCCACAAACGGCCATCAACTTTACCCTTT
ATGGTAACTCTATTTACCTCATCAAAGAGGTCGAGGAAAACGGTAAAAAACTGGCTAGAGTCGAGCAAATCAACCTGACG
GTATTAGAGCGTAACGGCAATAACGCACTAGTGAGTGGCGCGTTAAAAGCGGGAGATCGCATTGTCACCTCGGGGCAAAT
TCGCCTCAGTAACAACAGTAAAGTGACAGTTGTTGAAGACCAAGCCCTGACCCACTCCGACACTATGCCAAAGCTGTAA

Upstream 100 bases:

>100_bases
CATTTGCAATGTACAGATACAGAGATCCAGCAGGCATGTGAGCTTTGCCTTCAGGCAATTTCTGTGACGAATTAACTTAA
CTTTAGGAATCTTTAGCACC

Downstream 100 bases:

>100_bases
TAGGAGCAAGATAATGCGCTTTACAGATATCTTTATTAGGCGACCCGTACTCGCCGCCTCAATCAGCTTTCTCTTGCTGC
TGTTAGGCTTTAATGCACTC

Product: RND family efflux transporter MFP subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 372; Mature: 372

Protein sequence:

>372_residues
MKKWTLSMLAIAVLAFGSVIGFNLMVKSKIAEAIANMPEAEFPVTAMTLDMQKWQPTIDAIGFVEPHQGVTISNELAGRV
TSINFENGSRVEKGQLLAELDAKVERANLKSKMVQLPAAEADFKRLSKLYAQKSVSKQDLDNSESKYLALQADIESLKAT
IERREISAPFSGLVGIRNINLGEYLQPGTDIVRLEDISTMKIRFTIPQTQLPRIAVGQKIHVFVDSYPEQPFEGEIAAIE
PAVFYQSGLIQVQARIPNDNAKLRSGMFARVSILLPELDNQFVLPQTAINFTLYGNSIYLIKEVEENGKKLARVEQINLT
VLERNGNNALVSGALKAGDRIVTSGQIRLSNNSKVTVVEDQALTHSDTMPKL

Sequences:

>Translated_372_residues
MKKWTLSMLAIAVLAFGSVIGFNLMVKSKIAEAIANMPEAEFPVTAMTLDMQKWQPTIDAIGFVEPHQGVTISNELAGRV
TSINFENGSRVEKGQLLAELDAKVERANLKSKMVQLPAAEADFKRLSKLYAQKSVSKQDLDNSESKYLALQADIESLKAT
IERREISAPFSGLVGIRNINLGEYLQPGTDIVRLEDISTMKIRFTIPQTQLPRIAVGQKIHVFVDSYPEQPFEGEIAAIE
PAVFYQSGLIQVQARIPNDNAKLRSGMFARVSILLPELDNQFVLPQTAINFTLYGNSIYLIKEVEENGKKLARVEQINLT
VLERNGNNALVSGALKAGDRIVTSGQIRLSNNSKVTVVEDQALTHSDTMPKL
>Mature_372_residues
MKKWTLSMLAIAVLAFGSVIGFNLMVKSKIAEAIANMPEAEFPVTAMTLDMQKWQPTIDAIGFVEPHQGVTISNELAGRV
TSINFENGSRVEKGQLLAELDAKVERANLKSKMVQLPAAEADFKRLSKLYAQKSVSKQDLDNSESKYLALQADIESLKAT
IERREISAPFSGLVGIRNINLGEYLQPGTDIVRLEDISTMKIRFTIPQTQLPRIAVGQKIHVFVDSYPEQPFEGEIAAIE
PAVFYQSGLIQVQARIPNDNAKLRSGMFARVSILLPELDNQFVLPQTAINFTLYGNSIYLIKEVEENGKKLARVEQINLT
VLERNGNNALVSGALKAGDRIVTSGQIRLSNNSKVTVVEDQALTHSDTMPKL

Specific function: Unknown

COG id: COG0845

COG function: function code M; Membrane-fusion protein

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family [H]

Homologues:

Organism=Escherichia coli, GI87082036, Length=344, Percent_Identity=25, Blast_Score=106, Evalue=2e-24,
Organism=Escherichia coli, GI87081796, Length=326, Percent_Identity=25.7668711656442, Blast_Score=86, Evalue=4e-18,
Organism=Escherichia coli, GI1789665, Length=325, Percent_Identity=24, Blast_Score=72, Evalue=4e-14,
Organism=Escherichia coli, GI1789929, Length=321, Percent_Identity=22.4299065420561, Blast_Score=67, Evalue=2e-12,
Organism=Escherichia coli, GI1786668, Length=330, Percent_Identity=22.7272727272727, Blast_Score=65, Evalue=6e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006143 [H]

Pfam domain/function: PF00529 HlyD [H]

EC number: NA

Molecular weight: Translated: 41071; Mature: 41071

Theoretical pI: Translated: 6.83; Mature: 6.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKWTLSMLAIAVLAFGSVIGFNLMVKSKIAEAIANMPEAEFPVTAMTLDMQKWQPTIDA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEHHHCCCCHHH
IGFVEPHQGVTISNELAGRVTSINFENGSRVEKGQLLAELDAKVERANLKSKMVQLPAAE
CCCCCCCCCEEECHHHCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCH
ADFKRLSKLYAQKSVSKQDLDNSESKYLALQADIESLKATIERREISAPFSGLVGIRNIN
HHHHHHHHHHHHHCCCHHCCCCCCCEEEEEEECHHHHHHHHHHHHCCCCHHHCEEEEECC
LGEYLQPGTDIVRLEDISTMKIRFTIPQTQLPRIAVGQKIHVFVDSYPEQPFEGEIAAIE
CCCCCCCCCCEEEEECCCEEEEEEECCCCCCCCEECCCEEEEEEECCCCCCCCCCEEEEC
PAVFYQSGLIQVQARIPNDNAKLRSGMFARVSILLPELDNQFVLPQTAINFTLYGNSIYL
HHHEECCCEEEEEEECCCCCCHHHCCCEEEEEEEEECCCCCEECCCEEEEEEEECCEEEE
IKEVEENGKKLARVEQINLTVLERNGNNALVSGALKAGDRIVTSGQIRLSNNSKVTVVED
EEECCCCCHHEEEEEEEEEEEEEECCCCEEEEEEHHCCCEEEECCEEEECCCCEEEEEEC
QALTHSDTMPKL
CCCCCCCCCCCC
>Mature Secondary Structure
MKKWTLSMLAIAVLAFGSVIGFNLMVKSKIAEAIANMPEAEFPVTAMTLDMQKWQPTIDA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEHHHCCCCHHH
IGFVEPHQGVTISNELAGRVTSINFENGSRVEKGQLLAELDAKVERANLKSKMVQLPAAE
CCCCCCCCCEEECHHHCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCH
ADFKRLSKLYAQKSVSKQDLDNSESKYLALQADIESLKATIERREISAPFSGLVGIRNIN
HHHHHHHHHHHHHCCCHHCCCCCCCEEEEEEECHHHHHHHHHHHHCCCCHHHCEEEEECC
LGEYLQPGTDIVRLEDISTMKIRFTIPQTQLPRIAVGQKIHVFVDSYPEQPFEGEIAAIE
CCCCCCCCCCEEEEECCCEEEEEEECCCCCCCCEECCCEEEEEEECCCCCCCCCCEEEEC
PAVFYQSGLIQVQARIPNDNAKLRSGMFARVSILLPELDNQFVLPQTAINFTLYGNSIYL
HHHEECCCEEEEEEECCCCCCHHHCCCEEEEEEEEECCCCCEECCCEEEEEEEECCEEEE
IKEVEENGKKLARVEQINLTVLERNGNNALVSGALKAGDRIVTSGQIRLSNNSKVTVVED
EEECCCCCHHEEEEEEEEEEEEEECCCCEEEEEEHHCCCEEEECCEEEECCCCEEEEEEC
QALTHSDTMPKL
CCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]