| Definition | Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008577 |
| Length | 4,972,204 |
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The map label for this gene is 117918755
Identifier: 117918755
GI number: 117918755
Start: 331499
End: 331765
Strand: Reverse
Name: 117918755
Synonym: Shewana3_0298
Alternate gene names: NA
Gene position: 331765-331499 (Counterclockwise)
Preceding gene: 117918756
Following gene: 117918754
Centisome position: 6.67
GC content: 45.69
Gene sequence:
>267_bases ATGCCACAAACAAAAAACGGTCCCCAAGTGGACCGTTTTTTATGCCGATGCAAGCAGAATCAAGCTGATTATTTGCAACG ACCAATGCGCGAACCCGTGCTCGTGACTTTGTCGCAATCTTTTTTGGTGACTTTCTTCTCGGCGCTGCTTGCCACCGTCG AATCGGTATCTGTGTCATTTACCGATGCGCAGCCACTCAAACCTAATACGGCAACGGGTAACAGTATCGCAATCCATTTT TTTAGCATTTTATTCATCCCTGATTAA
Upstream 100 bases:
>100_bases GTGGCCGCACCTTTGCCCTCAATTATCAACTGAGTTGGTGATAACAGGCTAAAAGGCATCAATCACTTGTGTCAGCCTTC CCTTAAGGCAGGCTGAGCAA
Downstream 100 bases:
>100_bases ATAGTAATTTTGGCCTTGGGTATTTGCATGCAACCCAGAGTGGTTAAGCTAATCAATAAACGAGTGTGGCACAACGCTAC AAACGAGCCTAACTAGGTAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 88; Mature: 87
Protein sequence:
>88_residues MPQTKNGPQVDRFLCRCKQNQADYLQRPMREPVLVTLSQSFLVTFFSALLATVESVSVSFTDAQPLKPNTATGNSIAIHF FSILFIPD
Sequences:
>Translated_88_residues MPQTKNGPQVDRFLCRCKQNQADYLQRPMREPVLVTLSQSFLVTFFSALLATVESVSVSFTDAQPLKPNTATGNSIAIHF FSILFIPD >Mature_87_residues PQTKNGPQVDRFLCRCKQNQADYLQRPMREPVLVTLSQSFLVTFFSALLATVESVSVSFTDAQPLKPNTATGNSIAIHFF SILFIPD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9835; Mature: 9704
Theoretical pI: Translated: 8.23; Mature: 8.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPQTKNGPQVDRFLCRCKQNQADYLQRPMREPVLVTLSQSFLVTFFSALLATVESVSVSF CCCCCCCCHHHHHHHHHCCCCHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHCEEC TDAQPLKPNTATGNSIAIHFFSILFIPD CCCCCCCCCCCCCCCCEEEEEEEEECCC >Mature Secondary Structure PQTKNGPQVDRFLCRCKQNQADYLQRPMREPVLVTLSQSFLVTFFSALLATVESVSVSF CCCCCCCHHHHHHHHHCCCCHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHCEEC TDAQPLKPNTATGNSIAIHFFSILFIPD CCCCCCCCCCCCCCCCEEEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA