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The map label for this gene is 117918684

Identifier: 117918684

GI number: 117918684

Start: 256982

End: 257986

Strand: Reverse

Name: 117918684

Synonym: Shewana3_0226

Alternate gene names: NA

Gene position: 257986-256982 (Counterclockwise)

Preceding gene: 117918685

Following gene: 117918642

Centisome position: 5.19

GC content: 46.07

Gene sequence:

>1005_bases
ATGAATGTGATTAAGCCATTTAACAAAAGATGGCGACTGTTGCTACTCCTAATGCTCACCAGTCACCCGCTGATGCTCTA
CGCTGCTAAAGTGGTGGTTATCGAAAGTTACCATCAAGGCTATCAGTGGGATAAAGAATACTATCAAGCCATTACCGATA
AACTGACACCACAACATCAAGTTAGCCACTTTGAGATGGACACTAAGCGCTTAGCTAAAGAGCGCTACGCCGAGCGTGCA
GAACTCGCTTGGCAATTTATTGTGGAGCAACAACCACAACTTGTGATCCTTGCCGATGACAACGCCGTTCATTATCTCCA
TAAACGCCTCAATCACGGCCAAATTCCCGTGGTTTACCTCGAGGTGAATATGAATCCTCGGGAATACCATTTAAATGAAC
ATAGACGCTTCACAGGCGTGCTAGAGCGCCCCTTACTCAAGCGTTCCTTACTCTTACTCGAGAGATTATTGCCACAAGCC
AAGCATCGTAAAATCCTAGTGCTCTTCGATGGCAGCAATACTTCGAAAATCGCGGCCGAGTACATCAGTAAGCAACCATC
AAGCATGTTAAGTGATATCGAAGTTCACATTCTCCAGCTAGCCCAATTAGCAGAGTGGCAACAACAAGTCAGAGCGGCAA
AGGATAATGGTTATAGTGCAATTGTAGTGGCGCTGTATCACGCAGTCAGAGATGAACACGATCAATCAGTGGATGCCGAT
AACTTGCTCGAATGGATTGCTAACCACACGCCGGTGCCGAATTTCGGCTTTTGGGGATTTAGCATCTATGCCAATGGCAA
TCTAGGTGGCTATGTGCTCGATGGCTATCATCATGGCTCAATCGCTGCGGACATGGCCCTTAGAATACTCACAGGAGAAA
AGCCTGAGAACATCTTCCCTATCACGGATGCTCTTGGCCAATATCGATTTAGCCGTGCAGCGATAAAGAAATGGCAACTC
AAACTGCCAAAGGAAATTGAGAAACAAACGACTTGGGTTGATTAA

Upstream 100 bases:

>100_bases
ATTTAGATAAACAAAGAGCCTCTTCGGAGGCTTTTTTATTGTCCATTCACAATTAACGGCTGAACTATACTCAAGACAGT
TTTCCAGCAGGACGCTGTCT

Downstream 100 bases:

>100_bases
AGAAGAAACGCTAAAAACAAAAAAACCGGGCTTAGAGCCCGGTTTTTCAATCTTTGTAACCTTAATTACTCAGCAGCTTC
AACTTCAACAGCTTGAGCAG

Product: hypothetical protein

Products: NA

Alternate protein names: Diguanylate Cyclase; Sensory Box Histidine Kinase; PAS/PAC Sensor Hybrid Histidine Kinase; PAS/PAC Sensor Protein

Number of amino acids: Translated: 334; Mature: 334

Protein sequence:

>334_residues
MNVIKPFNKRWRLLLLLMLTSHPLMLYAAKVVVIESYHQGYQWDKEYYQAITDKLTPQHQVSHFEMDTKRLAKERYAERA
ELAWQFIVEQQPQLVILADDNAVHYLHKRLNHGQIPVVYLEVNMNPREYHLNEHRRFTGVLERPLLKRSLLLLERLLPQA
KHRKILVLFDGSNTSKIAAEYISKQPSSMLSDIEVHILQLAQLAEWQQQVRAAKDNGYSAIVVALYHAVRDEHDQSVDAD
NLLEWIANHTPVPNFGFWGFSIYANGNLGGYVLDGYHHGSIAADMALRILTGEKPENIFPITDALGQYRFSRAAIKKWQL
KLPKEIEKQTTWVD

Sequences:

>Translated_334_residues
MNVIKPFNKRWRLLLLLMLTSHPLMLYAAKVVVIESYHQGYQWDKEYYQAITDKLTPQHQVSHFEMDTKRLAKERYAERA
ELAWQFIVEQQPQLVILADDNAVHYLHKRLNHGQIPVVYLEVNMNPREYHLNEHRRFTGVLERPLLKRSLLLLERLLPQA
KHRKILVLFDGSNTSKIAAEYISKQPSSMLSDIEVHILQLAQLAEWQQQVRAAKDNGYSAIVVALYHAVRDEHDQSVDAD
NLLEWIANHTPVPNFGFWGFSIYANGNLGGYVLDGYHHGSIAADMALRILTGEKPENIFPITDALGQYRFSRAAIKKWQL
KLPKEIEKQTTWVD
>Mature_334_residues
MNVIKPFNKRWRLLLLLMLTSHPLMLYAAKVVVIESYHQGYQWDKEYYQAITDKLTPQHQVSHFEMDTKRLAKERYAERA
ELAWQFIVEQQPQLVILADDNAVHYLHKRLNHGQIPVVYLEVNMNPREYHLNEHRRFTGVLERPLLKRSLLLLERLLPQA
KHRKILVLFDGSNTSKIAAEYISKQPSSMLSDIEVHILQLAQLAEWQQQVRAAKDNGYSAIVVALYHAVRDEHDQSVDAD
NLLEWIANHTPVPNFGFWGFSIYANGNLGGYVLDGYHHGSIAADMALRILTGEKPENIFPITDALGQYRFSRAAIKKWQL
KLPKEIEKQTTWVD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38797; Mature: 38797

Theoretical pI: Translated: 8.60; Mature: 8.60

Prosite motif: PS00268 CECROPIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNVIKPFNKRWRLLLLLMLTSHPLMLYAAKVVVIESYHQGYQWDKEYYQAITDKLTPQHQ
CCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHEEHHHHCCCCCCHHHHHHHHHCCCCCHH
VSHFEMDTKRLAKERYAERAELAWQFIVEQQPQLVILADDNAVHYLHKRLNHGQIPVVYL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHCCCCCCEEEEE
EVNMNPREYHLNEHRRFTGVLERPLLKRSLLLLERLLPQAKHRKILVLFDGSNTSKIAAE
EECCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCEEEEEEECCCCHHHHHH
YISKQPSSMLSDIEVHILQLAQLAEWQQQVRAAKDNGYSAIVVALYHAVRDEHDQSVDAD
HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCHH
NLLEWIANHTPVPNFGFWGFSIYANGNLGGYVLDGYHHGSIAADMALRILTGEKPENIFP
HHHHHHHCCCCCCCCCCCEEEEEECCCCCCEEEECCCCCCHHHHHHHHHHCCCCCCCEEC
ITDALGQYRFSRAAIKKWQLKLPKEIEKQTTWVD
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCC
>Mature Secondary Structure
MNVIKPFNKRWRLLLLLMLTSHPLMLYAAKVVVIESYHQGYQWDKEYYQAITDKLTPQHQ
CCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHEEHHHHCCCCCCHHHHHHHHHCCCCCHH
VSHFEMDTKRLAKERYAERAELAWQFIVEQQPQLVILADDNAVHYLHKRLNHGQIPVVYL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHCCCCCCEEEEE
EVNMNPREYHLNEHRRFTGVLERPLLKRSLLLLERLLPQAKHRKILVLFDGSNTSKIAAE
EECCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCEEEEEEECCCCHHHHHH
YISKQPSSMLSDIEVHILQLAQLAEWQQQVRAAKDNGYSAIVVALYHAVRDEHDQSVDAD
HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCHH
NLLEWIANHTPVPNFGFWGFSIYANGNLGGYVLDGYHHGSIAADMALRILTGEKPENIFP
HHHHHHHCCCCCCCCCCCEEEEEECCCCCCEEEECCCCCCHHHHHHHHHHCCCCCCCEEC
ITDALGQYRFSRAAIKKWQLKLPKEIEKQTTWVD
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA