Click here to switch to the map view.

The map label for this gene is 117918596

Identifier: 117918596

GI number: 117918596

Start: 157777

End: 158553

Strand: Reverse

Name: 117918596

Synonym: Shewana3_0138

Alternate gene names: NA

Gene position: 158553-157777 (Counterclockwise)

Preceding gene: 117918598

Following gene: 117918592

Centisome position: 3.19

GC content: 49.42

Gene sequence:

>777_bases
ATGTCACTACGCCCTTTTATATTCACCCTCGGATTTGTCGCCGCCTTTACCGTTGGCGTGTCACTCACTGGCTGCATTAT
CAATGTGAACGCCGCCGGCATGCCGGATTTAGACCATCAGCAACGTGAACTCAGCCTCGATGCTCAAGACCTGCAGGAGC
TCGTCGCCGAAACTGGTGCAGGCAGCCTTGAAATAATCGGCGTCGAAGGCCTAACCCAAATTAAGTTAGTGGCTGATATC
TATAGCAATGACGATAGCAAAGTGATTCTCACCCTTGAGAAAAAGGCTAACAAAGCCCAGCTTAAGGCCGACTTTGAATC
CCATAGCAGCTTTAGCAATTATTCACCCTATATCGACCTTAAGTTACAAGTCCCCGCTGGATTAGCACTGGACATTGACG
ATGGTTCGGGTGCGATTTTGATCAACAAGATGACGGCGGATATCAAGGTCAAGGATGGCTCGGGCGAACTGGTTATCCAT
GGCGGCAATAATGTCAGCATCGACGATGGTTCTGGCGCGATTGAAGTCAGCCAAGTGAACGGCAATCTCGCGATTGTCGA
TGGCTCTGGCGGCATCCAAGTCAATGATATTAAAGGCAGCATCATCATCGATGACGGCTCTGGCGAAATCAACGTCGCCA
ATGTGCAAAACACAGTCACCATCAACGATGGCTCAGGCGATATCAATGTGGTGAACACTAAGGGCTTAACCATACTCTCG
GCAGGTTCAGGGGATGTGAGCTTCGATAAAATCGATGGCCCAGTCAGTAAACACTAA

Upstream 100 bases:

>100_bases
TGAAAGTTGGCATAGGATGTGCTATCTCTCGACATAGCAATTATCGCCATAGACTCCGCACTCTGCAGCTTATCGAGTGT
CGATAACAAGGAAGAAGAAA

Downstream 100 bases:

>100_bases
GCCCGTTAGACCAACAGCGTTACCGCTCAACCAACTTCCCGGCGTAGAGACTGATGTTGCAGTACCCAACCAAATGTCAG
TCTTCTACCCACCCCCTTTT

Product: putative lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 258; Mature: 257

Protein sequence:

>258_residues
MSLRPFIFTLGFVAAFTVGVSLTGCIINVNAAGMPDLDHQQRELSLDAQDLQELVAETGAGSLEIIGVEGLTQIKLVADI
YSNDDSKVILTLEKKANKAQLKADFESHSSFSNYSPYIDLKLQVPAGLALDIDDGSGAILINKMTADIKVKDGSGELVIH
GGNNVSIDDGSGAIEVSQVNGNLAIVDGSGGIQVNDIKGSIIIDDGSGEINVANVQNTVTINDGSGDINVVNTKGLTILS
AGSGDVSFDKIDGPVSKH

Sequences:

>Translated_258_residues
MSLRPFIFTLGFVAAFTVGVSLTGCIINVNAAGMPDLDHQQRELSLDAQDLQELVAETGAGSLEIIGVEGLTQIKLVADI
YSNDDSKVILTLEKKANKAQLKADFESHSSFSNYSPYIDLKLQVPAGLALDIDDGSGAILINKMTADIKVKDGSGELVIH
GGNNVSIDDGSGAIEVSQVNGNLAIVDGSGGIQVNDIKGSIIIDDGSGEINVANVQNTVTINDGSGDINVVNTKGLTILS
AGSGDVSFDKIDGPVSKH
>Mature_257_residues
SLRPFIFTLGFVAAFTVGVSLTGCIINVNAAGMPDLDHQQRELSLDAQDLQELVAETGAGSLEIIGVEGLTQIKLVADIY
SNDDSKVILTLEKKANKAQLKADFESHSSFSNYSPYIDLKLQVPAGLALDIDDGSGAILINKMTADIKVKDGSGELVIHG
GNNVSIDDGSGAIEVSQVNGNLAIVDGSGGIQVNDIKGSIIIDDGSGEINVANVQNTVTINDGSGDINVVNTKGLTILSA
GSGDVSFDKIDGPVSKH

Specific function: Unknown

COG id: COG3595

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26767; Mature: 26636

Theoretical pI: Translated: 4.09; Mature: 4.09

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLRPFIFTLGFVAAFTVGVSLTGCIINVNAAGMPDLDHQQRELSLDAQDLQELVAETGA
CCCCHHHHHHHHHHHHHHCEEEEEEEEEECCCCCCCCCCCHHHCCCCHHHHHHHHHHCCC
GSLEIIGVEGLTQIKLVADIYSNDDSKVILTLEKKANKAQLKADFESHSSFSNYSPYIDL
CCEEEEEECCCEEEEEEEEECCCCCCEEEEEEECCCCCEEEEECCCCCCCCCCCCCEEEE
KLQVPAGLALDIDDGSGAILINKMTADIKVKDGSGELVIHGGNNVSIDDGSGAIEVSQVN
EEECCCCEEEEEECCCCEEEEEEEEEEEEEECCCCCEEEECCCEEEEECCCCEEEEEEEC
GNLAIVDGSGGIQVNDIKGSIIIDDGSGEINVANVQNTVTINDGSGDINVVNTKGLTILS
CCEEEEECCCCEEEEEECCEEEEECCCCEEEEEECEEEEEEECCCCCEEEEEECCEEEEE
AGSGDVSFDKIDGPVSKH
CCCCCEEEEECCCCCCCC
>Mature Secondary Structure 
SLRPFIFTLGFVAAFTVGVSLTGCIINVNAAGMPDLDHQQRELSLDAQDLQELVAETGA
CCCHHHHHHHHHHHHHHCEEEEEEEEEECCCCCCCCCCCHHHCCCCHHHHHHHHHHCCC
GSLEIIGVEGLTQIKLVADIYSNDDSKVILTLEKKANKAQLKADFESHSSFSNYSPYIDL
CCEEEEEECCCEEEEEEEEECCCCCCEEEEEEECCCCCEEEEECCCCCCCCCCCCCEEEE
KLQVPAGLALDIDDGSGAILINKMTADIKVKDGSGELVIHGGNNVSIDDGSGAIEVSQVN
EEECCCCEEEEEECCCCEEEEEEEEEEEEEECCCCCEEEECCCEEEEECCCCEEEEEEEC
GNLAIVDGSGGIQVNDIKGSIIIDDGSGEINVANVQNTVTINDGSGDINVVNTKGLTILS
CCEEEEECCCCEEEEEECCEEEEECCCCEEEEEECEEEEEEECCCCCEEEEEECCEEEEE
AGSGDVSFDKIDGPVSKH
CCCCCEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA