Click here to switch to the map view.

The map label for this gene is yigZ [C]

Identifier: 117918485

GI number: 117918485

Start: 33366

End: 33980

Strand: Direct

Name: yigZ [C]

Synonym: Shewana3_0026

Alternate gene names: 117918485

Gene position: 33366-33980 (Clockwise)

Preceding gene: 117918484

Following gene: 117918486

Centisome position: 0.67

GC content: 48.62

Gene sequence:

>615_bases
GTGCTCGAAAGTTATCTGATACCGAGTGAAAGTGTGCAGATAGAAGAAGAGATAAAGCATAGCCGCTTTATCTCTTTTCT
ATTTCATTGCACGAGTTTAGAACAACTGAAGTTAGTACTTACTGACATAAAGCGAGATTATCCCGGCGCCAGTCATTACT
GCTATGCCTTTATCGCAGGAGCGCCTAACGACAGCATTGCCATCGGTTCGAGTGACGATGGTGAGCCTGCGGGCAGCGCT
GGTCGTCCAATGCTCGCAGTATTACAAGGCGCGAATCTCGGTGAAGTCGGTGCCGTGGTCGTGCGTTTCTATGGCGGTAC
TAAGTTAGGCGTGGGCGGTTTAGTGCGTGCCTATACCTCGGGATTACGCCAAGGTTTAGGGCAATTGCCGACGCGAGTAA
AGCAATTACGTTATCCGGCAAAACAGCATTGTGATTACACTCAATTAAGGGATGTTGAGCATCTACTGCAGCAGTTAGAA
GCGGTGATCATCGATAAGCAATTTGCCGAAGCCGTTGATATCCATTTTGAAATAGGCAAACAGCAGCAGGGCATATTGAA
TGAATCGCTGGCAACTTTGAGTCAGGGCAGCCTGCGCGCAGAGTTTGAGCTGTGA

Upstream 100 bases:

>100_bases
TTTCGGTGGTATTCGTATCGAGGATAATGTGATTGTGCATCAAGATCGAAACGAAAATATGACCCGCGAACTGGGCTTAG
CGTGATTTTAGGGAGAGCGA

Downstream 100 bases:

>100_bases
TGCCCGCGTAAATTATGCCAAAATATGCAAAATGCTGAAAATACCTTTGCAGCCAATGGAATAATTGAACACGCGGAATG
CAATACAAAACCATAATAAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 204; Mature: 204

Protein sequence:

>204_residues
MLESYLIPSESVQIEEEIKHSRFISFLFHCTSLEQLKLVLTDIKRDYPGASHYCYAFIAGAPNDSIAIGSSDDGEPAGSA
GRPMLAVLQGANLGEVGAVVVRFYGGTKLGVGGLVRAYTSGLRQGLGQLPTRVKQLRYPAKQHCDYTQLRDVEHLLQQLE
AVIIDKQFAEAVDIHFEIGKQQQGILNESLATLSQGSLRAEFEL

Sequences:

>Translated_204_residues
MLESYLIPSESVQIEEEIKHSRFISFLFHCTSLEQLKLVLTDIKRDYPGASHYCYAFIAGAPNDSIAIGSSDDGEPAGSA
GRPMLAVLQGANLGEVGAVVVRFYGGTKLGVGGLVRAYTSGLRQGLGQLPTRVKQLRYPAKQHCDYTQLRDVEHLLQQLE
AVIIDKQFAEAVDIHFEIGKQQQGILNESLATLSQGSLRAEFEL
>Mature_204_residues
MLESYLIPSESVQIEEEIKHSRFISFLFHCTSLEQLKLVLTDIKRDYPGASHYCYAFIAGAPNDSIAIGSSDDGEPAGSA
GRPMLAVLQGANLGEVGAVVVRFYGGTKLGVGGLVRAYTSGLRQGLGQLPTRVKQLRYPAKQHCDYTQLRDVEHLLQQLE
AVIIDKQFAEAVDIHFEIGKQQQGILNESLATLSQGSLRAEFEL

Specific function: Unknown

COG id: COG1739

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the IMPACT family [H]

Homologues:

Organism=Escherichia coli, GI87082338, Length=198, Percent_Identity=44.4444444444444, Blast_Score=154, Evalue=3e-39,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009022
- InterPro:   IPR020568
- InterPro:   IPR000640
- InterPro:   IPR015796
- InterPro:   IPR015269
- InterPro:   IPR020569
- InterPro:   IPR001498 [H]

Pfam domain/function: PF09186 DUF1949; PF01205 UPF0029 [H]

EC number: NA

Molecular weight: Translated: 22352; Mature: 22352

Theoretical pI: Translated: 5.59; Mature: 5.59

Prosite motif: PS00910 UPF0029

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLESYLIPSESVQIEEEIKHSRFISFLFHCTSLEQLKLVLTDIKRDYPGASHYCYAFIAG
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCEEEEEEEC
APNDSIAIGSSDDGEPAGSAGRPMLAVLQGANLGEVGAVVVRFYGGTKLGVGGLVRAYTS
CCCCCEEECCCCCCCCCCCCCCCCEEHHCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHH
GLRQGLGQLPTRVKQLRYPAKQHCDYTQLRDVEHLLQQLEAVIIDKQFAEAVDIHFEIGK
HHHHHHHHHHHHHHHHCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
QQQGILNESLATLSQGSLRAEFEL
CHHHHHHHHHHHHHCCCCEEECCC
>Mature Secondary Structure
MLESYLIPSESVQIEEEIKHSRFISFLFHCTSLEQLKLVLTDIKRDYPGASHYCYAFIAG
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCEEEEEEEC
APNDSIAIGSSDDGEPAGSAGRPMLAVLQGANLGEVGAVVVRFYGGTKLGVGGLVRAYTS
CCCCCEEECCCCCCCCCCCCCCCCEEHHCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHH
GLRQGLGQLPTRVKQLRYPAKQHCDYTQLRDVEHLLQQLEAVIIDKQFAEAVDIHFEIGK
HHHHHHHHHHHHHHHHCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
QQQGILNESLATLSQGSLRAEFEL
CHHHHHHHHHHHHHCCCCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]