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The map label for this gene is czcB [H]

Identifier: 117676322

GI number: 117676322

Start: 272391

End: 273635

Strand: Reverse

Name: czcB [H]

Synonym: Shewana3_4385

Alternate gene names: 117676322

Gene position: 273635-272391 (Counterclockwise)

Preceding gene: 117676323

Following gene: 117676321

Centisome position: 98.1

GC content: 49.4

Gene sequence:

>1245_bases
ATGAAGAATAACAACACCTTTTCGTCATTGAGTTTGGCGATACTGCTCAGTCTGGGTATTAATGCCGTCGCTTCAACACC
TTTAATGGCATCCTCAGCGCCCGTTGCCGAGCAAGCTGAACCCGAAAAAGGGCCGCATCGTGGACGTATGCTGCGTGAGG
GCGATTTTGCACTAGAGCTCGCCATTTTTGAAACGGGCGTTCCCCCTGAGTTCCGTGTTTGGACGAGCTTTGAGGGGAAA
CCGCTCGATCCTAAGACCGTCGATTTGAGTGTGAAATTGACCCGTTTAGGCAATGTGGTGGATGACATTCGCTTTAATGC
GCAGGGTGATTTTCTCCGTGGTGATATGGAGATCTATGAACCCCATTCGTTTATCGTCACCATTGAGGCGAAATACCAAG
GTAAAACATACCGTTGGCAGTATGACAACTTTGAAGGCCGTACCACTATCGAGCAGGCTGTTGCCAGTGCGATGGAGATT
CACTCTGGTTTTGCAGGCCCTGCCACATTGCATCAAACCATCCCAGCCTATGGCACATTGGCGCTACCCGTCGGGACGCA
ACGTGCAATTGCGGCACGTTTTGACGGCGAAATTACCCGGTTACATGTTGGACTGGGTGACAGGGTGAAAAAGGGGCAAA
CCCTTTTGACTGTAGAAAGTAATGAGAGCTTAAAACCCTATCAAATTAAAGCGCCGTCCGATGGCGTGGTGTCAGCATTG
TTCGCCAACAATGGAGAACAAACCCTAGGGCGTCAGTTGTTGACACTGACCGATAACAGTCACTATATCGCTAAGCTTGC
TGTGTACCCCATTGATTATCAAAGCGTCATCTTAGGTGCACCTGTCACTATCAACGTCGAGGGTGTGGAGGAAACCTATC
AAGGTTCCATTAGCTTTATTGAACCAGAGGTTCGTGACGATCAAGCCCGTATTGCGTGGGTCAAACTTGCCGATCCTAAC
GGGGTTTTGACTGCGGGCAGTTTTGTAAATGCCAGTATTGAAGTCGCAACCATTGAGGTGCCATTGGCGGTTAAAAGAGT
CGGATTACAAGGGTTTCGTGATTTTACCGTCGTCTTTGCTAAGGTCGGAGAGCAGTACGAAGTCCGTATGCTGGAGCTTG
GCCGTCAAGACGGTGAGTGGGTCGAAGTGCTTGGTGGCTTAAAGCCTGGTACTGAATACGTGACCGATAATAGCTACATC
TTAAAAGCCGACATTGAAAAGTCTGGCGCATCACACGATCACTAG

Upstream 100 bases:

>100_bases
GTGCTCAATATCAGTTGCTGGATGCCTTTGAAAGTTTGCATTTACAACACATTGAAATTCAACGCCTAACGGGCACATCC
ATTTCTCAGTGAGATTACCT

Downstream 100 bases:

>100_bases
GAGTTCGAGTCATGTTGGAATCGATTTTACGCTTTTCGATAAAGCGCAAATTCTTAGTGTTAGTGATGGTAATCGCCGTT
GCGGGATTAGGGCTATGGAA

Product: secretion protein HlyD

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 414; Mature: 414

Protein sequence:

>414_residues
MKNNNTFSSLSLAILLSLGINAVASTPLMASSAPVAEQAEPEKGPHRGRMLREGDFALELAIFETGVPPEFRVWTSFEGK
PLDPKTVDLSVKLTRLGNVVDDIRFNAQGDFLRGDMEIYEPHSFIVTIEAKYQGKTYRWQYDNFEGRTTIEQAVASAMEI
HSGFAGPATLHQTIPAYGTLALPVGTQRAIAARFDGEITRLHVGLGDRVKKGQTLLTVESNESLKPYQIKAPSDGVVSAL
FANNGEQTLGRQLLTLTDNSHYIAKLAVYPIDYQSVILGAPVTINVEGVEETYQGSISFIEPEVRDDQARIAWVKLADPN
GVLTAGSFVNASIEVATIEVPLAVKRVGLQGFRDFTVVFAKVGEQYEVRMLELGRQDGEWVEVLGGLKPGTEYVTDNSYI
LKADIEKSGASHDH

Sequences:

>Translated_414_residues
MKNNNTFSSLSLAILLSLGINAVASTPLMASSAPVAEQAEPEKGPHRGRMLREGDFALELAIFETGVPPEFRVWTSFEGK
PLDPKTVDLSVKLTRLGNVVDDIRFNAQGDFLRGDMEIYEPHSFIVTIEAKYQGKTYRWQYDNFEGRTTIEQAVASAMEI
HSGFAGPATLHQTIPAYGTLALPVGTQRAIAARFDGEITRLHVGLGDRVKKGQTLLTVESNESLKPYQIKAPSDGVVSAL
FANNGEQTLGRQLLTLTDNSHYIAKLAVYPIDYQSVILGAPVTINVEGVEETYQGSISFIEPEVRDDQARIAWVKLADPN
GVLTAGSFVNASIEVATIEVPLAVKRVGLQGFRDFTVVFAKVGEQYEVRMLELGRQDGEWVEVLGGLKPGTEYVTDNSYI
LKADIEKSGASHDH
>Mature_414_residues
MKNNNTFSSLSLAILLSLGINAVASTPLMASSAPVAEQAEPEKGPHRGRMLREGDFALELAIFETGVPPEFRVWTSFEGK
PLDPKTVDLSVKLTRLGNVVDDIRFNAQGDFLRGDMEIYEPHSFIVTIEAKYQGKTYRWQYDNFEGRTTIEQAVASAMEI
HSGFAGPATLHQTIPAYGTLALPVGTQRAIAARFDGEITRLHVGLGDRVKKGQTLLTVESNESLKPYQIKAPSDGVVSAL
FANNGEQTLGRQLLTLTDNSHYIAKLAVYPIDYQSVILGAPVTINVEGVEETYQGSISFIEPEVRDDQARIAWVKLADPN
GVLTAGSFVNASIEVATIEVPLAVKRVGLQGFRDFTVVFAKVGEQYEVRMLELGRQDGEWVEVLGGLKPGTEYVTDNSYI
LKADIEKSGASHDH

Specific function: CzcA and CzcB together would act in zinc efflux nearly as effectively as the complete czc efflux system (CzcABC). The CzcB protein is thought to funnel zinc cations to the CzcA transport protein [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005695
- InterPro:   IPR006143 [H]

Pfam domain/function: PF00529 HlyD [H]

EC number: NA

Molecular weight: Translated: 45258; Mature: 45258

Theoretical pI: Translated: 4.84; Mature: 4.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNNNTFSSLSLAILLSLGINAVASTPLMASSAPVAEQAEPEKGPHRGRMLREGDFALEL
CCCCCCHHHHHHHHHHHHCCHHHHCCCCEECCCCCCCCCCCCCCCCCCCEEECCCEEEEE
AIFETGVPPEFRVWTSFEGKPLDPKTVDLSVKLTRLGNVVDDIRFNAQGDFLRGDMEIYE
EEEECCCCCCEEEEECCCCCCCCCCEEEEEEEEHHHCCHHHHEEECCCCCEEECCEEEEC
PHSFIVTIEAKYQGKTYRWQYDNFEGRTTIEQAVASAMEIHSGFAGPATLHQTIPAYGTL
CCEEEEEEEEEECCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCEE
ALPVGTQRAIAARFDGEITRLHVGLGDRVKKGQTLLTVESNESLKPYQIKAPSDGVVSAL
EECCCCCCEEEEECCCCEEEEEECCCCCCCCCCEEEEEECCCCCCCEEEECCCCCEEEEE
FANNGEQTLGRQLLTLTDNSHYIAKLAVYPIDYQSVILGAPVTINVEGVEETYQGSISFI
ECCCCHHHHCCEEEEEECCCEEEEEEEEEECCHHHEEECCCEEEEECCCCHHHCCCEEEE
EPEVRDDQARIAWVKLADPNGVLTAGSFVNASIEVATIEVPLAVKRVGLQGFRDFTVVFA
CCCCCCCCEEEEEEEEECCCCEEEECCEECCEEEEEEEEECHHHHHHCCCCCHHHHHHEE
KVGEQYEVRMLELGRQDGEWVEVLGGLKPGTEYVTDNSYILKADIEKSGASHDH
CCCCCCEEEEEECCCCCCCHHHHHCCCCCCCEEEECCCEEEEEECCCCCCCCCC
>Mature Secondary Structure
MKNNNTFSSLSLAILLSLGINAVASTPLMASSAPVAEQAEPEKGPHRGRMLREGDFALEL
CCCCCCHHHHHHHHHHHHCCHHHHCCCCEECCCCCCCCCCCCCCCCCCCEEECCCEEEEE
AIFETGVPPEFRVWTSFEGKPLDPKTVDLSVKLTRLGNVVDDIRFNAQGDFLRGDMEIYE
EEEECCCCCCEEEEECCCCCCCCCCEEEEEEEEHHHCCHHHHEEECCCCCEEECCEEEEC
PHSFIVTIEAKYQGKTYRWQYDNFEGRTTIEQAVASAMEIHSGFAGPATLHQTIPAYGTL
CCEEEEEEEEEECCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCEE
ALPVGTQRAIAARFDGEITRLHVGLGDRVKKGQTLLTVESNESLKPYQIKAPSDGVVSAL
EECCCCCCEEEEECCCCEEEEEECCCCCCCCCCEEEEEECCCCCCCEEEECCCCCEEEEE
FANNGEQTLGRQLLTLTDNSHYIAKLAVYPIDYQSVILGAPVTINVEGVEETYQGSISFI
ECCCCHHHHCCEEEEEECCCEEEEEEEEEECCHHHEEECCCEEEEECCCCHHHCCCEEEE
EPEVRDDQARIAWVKLADPNGVLTAGSFVNASIEVATIEVPLAVKRVGLQGFRDFTVVFA
CCCCCCCCEEEEEEEEECCCCEEEECCEECCEEEEEEEEECHHHHHHCCCCCHHHHHHEE
KVGEQYEVRMLELGRQDGEWVEVLGGLKPGTEYVTDNSYILKADIEKSGASHDH
CCCCCCEEEEEECCCCCCCHHHHHCCCCCCCEEEECCCEEEEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8829543 [H]