| Definition | Shewanella sp. ANA-3 plasmid 1, complete sequence. |
|---|---|
| Accession | NC_008573 |
| Length | 278,942 |
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The map label for this gene is 117676305
Identifier: 117676305
GI number: 117676305
Start: 256919
End: 257974
Strand: Direct
Name: 117676305
Synonym: Shewana3_4368
Alternate gene names: NA
Gene position: 256919-257974 (Clockwise)
Preceding gene: 117676299
Following gene: 117676306
Centisome position: 92.1
GC content: 51.52
Gene sequence:
>1056_bases ATGGCTCGCGCCGGAATCACTTACTACGATGTCTCGAAAGCCGCAGAGGCTATCAAAATCCAGAACCAGGAGCCTACCGT AGATCGTGTCCGCGAGCATTTGGGAACCGGCAGCAAAAGCACCATTGCACCACTACTCAAGCGCTGGCGGTCAGATAATG GGGAGGTGGTCGATGTGAGCGGGTTGCCGAATGATCTCGTCGAGGTAGTAAAAGCCTTACATGAACGGGTTCAGCAGATG GCCGACCAGCGCATCGCGCAATCCCGCGACGAATTCAAGGCATCGAATGATCAACTCCGGAAAGAATTGACTGAGGCCCG TAACAGCATCGCGCAGCTTACCGACCGCCAACAGGATCTGAACGCCCAGCTATCGCAAATTACCGAAGCAAAAGCCCTGC AAAGCAAGTCCCTGGAAGATGTACGCATTAAGCTAGCAACGGCAGAGGCTCAACGCGACGAAGCCCTTTCACGAACTGCT GAATTAAAGGAAAGCGTTGCAGAACTCAAGCAGGAAAATAAGGATATTCGTGATCACTTTGAACACTACCAGCAACGCAC CGCCGAAGATCGGCAGCAGGAACGCGAGCAATTCCACGTGGTTAACCAGGGCCTGAAAGACCTGATTCAAGACCTGCAAC ACCGGCTCATCCAAGCCGAGTCAAGCGCGTCCGAACTGATAGACACTAATGCGCACTTACAACGACAAACGCATGAGCTC GAACAGGCCAATGCGATGAACAAAAGCACCTTGGATAGACAAGTGGTCGATATCGAGAACTTGGAGCATCGACTTAACGA CGCCTCGGCAAAAAGCCGGGAGCAGCAACATAAAAGTGAACAACTGGCGGATAATATTGCCGCACTTACCAGCCAGAAAG CAGATGCCGATAAGCAAGTGGCCGTACTATCCCAAGCATTGGAGGCCACTAAAACGGATCTGATAGTCTCTCAGAATAGA GTGGAAGCTCTGTCCGATGAGAACAGGTTGATTCTTCAGGAAAAAGCGGTGATTCAGGGACAGTTTAAGCAGCTTCAGGA TTCGCTATCTCGGTAA
Upstream 100 bases:
>100_bases GGTTACTATTTAATTTTTATTGGCTGCATAAAAGTCAATATATTATGTTATATTACGTGCTATGTAATACGTTACTAAAT AATCACCGAGGGAAACTGTC
Downstream 100 bases:
>100_bases GGATTTTATCCAGCCTTTGTCAGAAAAGCTAAATGAATCAATGTCTTATTTGCAAAGTGGCTAATTCCAACGCTTTTACC GGCCGGACCTCTACCTGAAT
Product: chromosome segregation ATPases-like protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 351; Mature: 350
Protein sequence:
>351_residues MARAGITYYDVSKAAEAIKIQNQEPTVDRVREHLGTGSKSTIAPLLKRWRSDNGEVVDVSGLPNDLVEVVKALHERVQQM ADQRIAQSRDEFKASNDQLRKELTEARNSIAQLTDRQQDLNAQLSQITEAKALQSKSLEDVRIKLATAEAQRDEALSRTA ELKESVAELKQENKDIRDHFEHYQQRTAEDRQQEREQFHVVNQGLKDLIQDLQHRLIQAESSASELIDTNAHLQRQTHEL EQANAMNKSTLDRQVVDIENLEHRLNDASAKSREQQHKSEQLADNIAALTSQKADADKQVAVLSQALEATKTDLIVSQNR VEALSDENRLILQEKAVIQGQFKQLQDSLSR
Sequences:
>Translated_351_residues MARAGITYYDVSKAAEAIKIQNQEPTVDRVREHLGTGSKSTIAPLLKRWRSDNGEVVDVSGLPNDLVEVVKALHERVQQM ADQRIAQSRDEFKASNDQLRKELTEARNSIAQLTDRQQDLNAQLSQITEAKALQSKSLEDVRIKLATAEAQRDEALSRTA ELKESVAELKQENKDIRDHFEHYQQRTAEDRQQEREQFHVVNQGLKDLIQDLQHRLIQAESSASELIDTNAHLQRQTHEL EQANAMNKSTLDRQVVDIENLEHRLNDASAKSREQQHKSEQLADNIAALTSQKADADKQVAVLSQALEATKTDLIVSQNR VEALSDENRLILQEKAVIQGQFKQLQDSLSR >Mature_350_residues ARAGITYYDVSKAAEAIKIQNQEPTVDRVREHLGTGSKSTIAPLLKRWRSDNGEVVDVSGLPNDLVEVVKALHERVQQMA DQRIAQSRDEFKASNDQLRKELTEARNSIAQLTDRQQDLNAQLSQITEAKALQSKSLEDVRIKLATAEAQRDEALSRTAE LKESVAELKQENKDIRDHFEHYQQRTAEDRQQEREQFHVVNQGLKDLIQDLQHRLIQAESSASELIDTNAHLQRQTHELE QANAMNKSTLDRQVVDIENLEHRLNDASAKSREQQHKSEQLADNIAALTSQKADADKQVAVLSQALEATKTDLIVSQNRV EALSDENRLILQEKAVIQGQFKQLQDSLSR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39785; Mature: 39653
Theoretical pI: Translated: 5.36; Mature: 5.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 0.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 0.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARAGITYYDVSKAAEAIKIQNQEPTVDRVREHLGTGSKSTIAPLLKRWRSDNGEVVDVS CCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHCCCCCEEECC GLPNDLVEVVKALHERVQQMADQRIAQSRDEFKASNDQLRKELTEARNSIAQLTDRQQDL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH NAQLSQITEAKALQSKSLEDVRIKLATAEAQRDEALSRTAELKESVAELKQENKDIRDHF HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH EHYQQRTAEDRQQEREQFHVVNQGLKDLIQDLQHRLIQAESSASELIDTNAHLQRQTHEL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EQANAMNKSTLDRQVVDIENLEHRLNDASAKSREQQHKSEQLADNIAALTSQKADADKQV HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH AVLSQALEATKTDLIVSQNRVEALSDENRLILQEKAVIQGQFKQLQDSLSR HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure ARAGITYYDVSKAAEAIKIQNQEPTVDRVREHLGTGSKSTIAPLLKRWRSDNGEVVDVS CCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHCCCCCEEECC GLPNDLVEVVKALHERVQQMADQRIAQSRDEFKASNDQLRKELTEARNSIAQLTDRQQDL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH NAQLSQITEAKALQSKSLEDVRIKLATAEAQRDEALSRTAELKESVAELKQENKDIRDHF HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH EHYQQRTAEDRQQEREQFHVVNQGLKDLIQDLQHRLIQAESSASELIDTNAHLQRQTHEL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EQANAMNKSTLDRQVVDIENLEHRLNDASAKSREQQHKSEQLADNIAALTSQKADADKQV HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH AVLSQALEATKTDLIVSQNRVEALSDENRLILQEKAVIQGQFKQLQDSLSR HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA