Click here to switch to the map view.

The map label for this gene is 117676287

Identifier: 117676287

GI number: 117676287

Start: 234373

End: 235905

Strand: Reverse

Name: 117676287

Synonym: Shewana3_4350

Alternate gene names: NA

Gene position: 235905-234373 (Counterclockwise)

Preceding gene: 117676288

Following gene: 117676278

Centisome position: 84.57

GC content: 40.18

Gene sequence:

>1533_bases
GTGACTCAAATAGTTTCTAGGGAAGAGGCCCTATTAACAGCGGCGAAAAAGTTGGATATTTCACCGACTAAATATAAGCA
AGCGATTGATCGCTTTAATTCAATGAAAACGCACCTAGAGCAAGGTAACTATCCTGGAACATTTCGTGTCCCAGAGGTAT
ACCTTCAAGGCTCTTTTAAGCTTGGAACAGAAATCCGCCCATTCAAAAATAGTAAAGATGCAGATTATGACATTGATTTG
GTCTGCAACTTGGGGCATTCAAAACAGGCTGTACTAGCCTCCACTGTAAAAAATCAGGTTGGGGAACGGATTAAAGAGAA
TGGCACTTATTCCCGATTGTTAGATGATGAAGGAAAGCGCTGCTGGACTCTTAACTATGCTGAAGATGATGGGGTTGGAT
TCCATATGGATATACTCCCTTCTGTTGTAGAAAACAGTTTATTAGCCCGACCTCAATCAATTGCAGCTACAAATAAAGAT
CAAGAAAACAGCTACTCTTGGACAACGAGCAACCCGAAAGGATTTGCTGCATGGTTTTACGAAAGAAATGGCACTGTATT
TGAACAAGCAAAATTAACTCAGAAACAACGCATCTTCAACAATCAAAGACAGTTGTACAATTCGATTGACGATGTTCCAA
ATATCCACGTTAAAACGCCGTTGCAGAGGGCCATTCAGCTATTAAAGAGACACCGTGACGTAAGGTTTTCACAATCAGAT
ATTGAAACCTTCAAACCAATCTCAATGATCATTACTGTATTAGCTGCCAATAGTTATAACAATGAAGCAACTATCTATGA
CACGTTGAGAAATCTAATATCATCTTTAAACCAGCACTCTCATCAATTAAGCAATAGCTTTGTTTTTAATGATTACTACG
CAAGAAATACCTACACATTGATAACTCGCACATCTGATGGGAAGTGGCTTATCCCCAACCCTGCTAATCCGGGAGAAAAC
TTCGCTGACCGATGGCATGAGGATGATAACGCAAGAGCAAAAGCTTTTTTCCGATGGGTGGATTGGCTCAGAGACGATTT
CATCAATATTGATACCTTTATCGAGGAAGATAAGTTAACTAAGTCACTTGTTGATGTATACAAACCAACAAATCTACCTG
CACTAAGCTTTAATGTGCCCCATAAGGAACAACTTCGATACCCTATTGTTGCAAACATATATTCAGCGAATATAAAAGCA
AGTTATAAATCCAACATATATTGGAAAGAGTTTCAGTCTGGACAGCCTTTACTCAAAGGAAAGGAGTTAAAGTTCAAACT
TAAGACTAATGTTCCTGCACCGTTCGACGTTTATTGGCAGGTAGTAAACACAGGTCAAGAGGCGGCAAATGTAGGGCAGC
TTAGGGGGGAAATATCTACTCAATCAAACACGTCTGCAGACGAAATTTATCGAACAGAATCCACCTCCTACACTGGTGAT
CATTGGGTTGAGGGATTCGTCATCAAAGATCGTGTATGCGTTGCGAGAACTGGTGAATTTGTCGTAAGCGTCAGAGATAG
GTTCGCTGTATGA

Upstream 100 bases:

>100_bases
ATGACGTTTCTGAAATCGATAATTTGATCAGTTTAGCCGACAAGAATTTTACATATGGAAGTAAAGAGATTAGCAACTTT
GTCTTAGGAGGAAATGTATC

Downstream 100 bases:

>100_bases
ATAACGTGAACTTCCAAGAAGAATTAAGTGCAAAAACTACAACACTTACGCTGCTAACTAATCTAGGCGTTGTAACATTA
CAAAAATTTGGTCAACTGAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 510; Mature: 509

Protein sequence:

>510_residues
MTQIVSREEALLTAAKKLDISPTKYKQAIDRFNSMKTHLEQGNYPGTFRVPEVYLQGSFKLGTEIRPFKNSKDADYDIDL
VCNLGHSKQAVLASTVKNQVGERIKENGTYSRLLDDEGKRCWTLNYAEDDGVGFHMDILPSVVENSLLARPQSIAATNKD
QENSYSWTTSNPKGFAAWFYERNGTVFEQAKLTQKQRIFNNQRQLYNSIDDVPNIHVKTPLQRAIQLLKRHRDVRFSQSD
IETFKPISMIITVLAANSYNNEATIYDTLRNLISSLNQHSHQLSNSFVFNDYYARNTYTLITRTSDGKWLIPNPANPGEN
FADRWHEDDNARAKAFFRWVDWLRDDFINIDTFIEEDKLTKSLVDVYKPTNLPALSFNVPHKEQLRYPIVANIYSANIKA
SYKSNIYWKEFQSGQPLLKGKELKFKLKTNVPAPFDVYWQVVNTGQEAANVGQLRGEISTQSNTSADEIYRTESTSYTGD
HWVEGFVIKDRVCVARTGEFVVSVRDRFAV

Sequences:

>Translated_510_residues
MTQIVSREEALLTAAKKLDISPTKYKQAIDRFNSMKTHLEQGNYPGTFRVPEVYLQGSFKLGTEIRPFKNSKDADYDIDL
VCNLGHSKQAVLASTVKNQVGERIKENGTYSRLLDDEGKRCWTLNYAEDDGVGFHMDILPSVVENSLLARPQSIAATNKD
QENSYSWTTSNPKGFAAWFYERNGTVFEQAKLTQKQRIFNNQRQLYNSIDDVPNIHVKTPLQRAIQLLKRHRDVRFSQSD
IETFKPISMIITVLAANSYNNEATIYDTLRNLISSLNQHSHQLSNSFVFNDYYARNTYTLITRTSDGKWLIPNPANPGEN
FADRWHEDDNARAKAFFRWVDWLRDDFINIDTFIEEDKLTKSLVDVYKPTNLPALSFNVPHKEQLRYPIVANIYSANIKA
SYKSNIYWKEFQSGQPLLKGKELKFKLKTNVPAPFDVYWQVVNTGQEAANVGQLRGEISTQSNTSADEIYRTESTSYTGD
HWVEGFVIKDRVCVARTGEFVVSVRDRFAV
>Mature_509_residues
TQIVSREEALLTAAKKLDISPTKYKQAIDRFNSMKTHLEQGNYPGTFRVPEVYLQGSFKLGTEIRPFKNSKDADYDIDLV
CNLGHSKQAVLASTVKNQVGERIKENGTYSRLLDDEGKRCWTLNYAEDDGVGFHMDILPSVVENSLLARPQSIAATNKDQ
ENSYSWTTSNPKGFAAWFYERNGTVFEQAKLTQKQRIFNNQRQLYNSIDDVPNIHVKTPLQRAIQLLKRHRDVRFSQSDI
ETFKPISMIITVLAANSYNNEATIYDTLRNLISSLNQHSHQLSNSFVFNDYYARNTYTLITRTSDGKWLIPNPANPGENF
ADRWHEDDNARAKAFFRWVDWLRDDFINIDTFIEEDKLTKSLVDVYKPTNLPALSFNVPHKEQLRYPIVANIYSANIKAS
YKSNIYWKEFQSGQPLLKGKELKFKLKTNVPAPFDVYWQVVNTGQEAANVGQLRGEISTQSNTSADEIYRTESTSYTGDH
WVEGFVIKDRVCVARTGEFVVSVRDRFAV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 58534; Mature: 58403

Theoretical pI: Translated: 8.36; Mature: 8.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQIVSREEALLTAAKKLDISPTKYKQAIDRFNSMKTHLEQGNYPGTFRVPEVYLQGSFK
CCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEECCEEEEECCEE
LGTEIRPFKNSKDADYDIDLVCNLGHSKQAVLASTVKNQVGERIKENGTYSRLLDDEGKR
ECCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCE
CWTLNYAEDDGVGFHMDILPSVVENSLLARPQSIAATNKDQENSYSWTTSNPKGFAAWFY
EEEEECCCCCCCEEEHHHHHHHHHHHHHCCCHHHHCCCCCCCCCEEEECCCCCCEEEEEE
ERNGTVFEQAKLTQKQRIFNNQRQLYNSIDDVPNIHVKTPLQRAIQLLKRHRDVRFSQSD
ECCCCEEHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCHHHHHHHHHHHHCCCCCCHHH
IETFKPISMIITVLAANSYNNEATIYDTLRNLISSLNQHSHQLSNSFVFNDYYARNTYTL
HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEECEECCCEEEE
ITRTSDGKWLIPNPANPGENFADRWHEDDNARAKAFFRWVDWLRDDFINIDTFIEEDKLT
EEEECCCCEECCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
KSLVDVYKPTNLPALSFNVPHKEQLRYPIVANIYSANIKASYKSNIYWKEFQSGQPLLKG
HHHHHHHCCCCCCEEEECCCCHHHCCCCEEEEEEECCEEECCCCCEEEEHHCCCCCCCCC
KELKFKLKTNVPAPFDVYWQVVNTGQEAANVGQLRGEISTQSNTSADEIYRTESTSYTGD
CCEEEEEECCCCCCHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCHHHHEECCCCCCCCC
HWVEGFVIKDRVCVARTGEFVVSVRDRFAV
HHEEEEEEECCEEEEECCCEEEEEHHHHCC
>Mature Secondary Structure 
TQIVSREEALLTAAKKLDISPTKYKQAIDRFNSMKTHLEQGNYPGTFRVPEVYLQGSFK
CCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEECCEEEEECCEE
LGTEIRPFKNSKDADYDIDLVCNLGHSKQAVLASTVKNQVGERIKENGTYSRLLDDEGKR
ECCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCE
CWTLNYAEDDGVGFHMDILPSVVENSLLARPQSIAATNKDQENSYSWTTSNPKGFAAWFY
EEEEECCCCCCCEEEHHHHHHHHHHHHHCCCHHHHCCCCCCCCCEEEECCCCCCEEEEEE
ERNGTVFEQAKLTQKQRIFNNQRQLYNSIDDVPNIHVKTPLQRAIQLLKRHRDVRFSQSD
ECCCCEEHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCHHHHHHHHHHHHCCCCCCHHH
IETFKPISMIITVLAANSYNNEATIYDTLRNLISSLNQHSHQLSNSFVFNDYYARNTYTL
HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEECEECCCEEEE
ITRTSDGKWLIPNPANPGENFADRWHEDDNARAKAFFRWVDWLRDDFINIDTFIEEDKLT
EEEECCCCEECCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
KSLVDVYKPTNLPALSFNVPHKEQLRYPIVANIYSANIKASYKSNIYWKEFQSGQPLLKG
HHHHHHHCCCCCCEEEECCCCHHHCCCCEEEEEEECCEEECCCCCEEEEHHCCCCCCCCC
KELKFKLKTNVPAPFDVYWQVVNTGQEAANVGQLRGEISTQSNTSADEIYRTESTSYTGD
CCEEEEEECCCCCCHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCHHHHEECCCCCCCCC
HWVEGFVIKDRVCVARTGEFVVSVRDRFAV
HHEEEEEEECCEEEEECCCEEEEEHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA