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The map label for this gene is 117676266

Identifier: 117676266

GI number: 117676266

Start: 218568

End: 219854

Strand: Direct

Name: 117676266

Synonym: Shewana3_4329

Alternate gene names: NA

Gene position: 218568-219854 (Clockwise)

Preceding gene: 117676260

Following gene: 117676267

Centisome position: 78.36

GC content: 42.5

Gene sequence:

>1287_bases
ATGGCAGTAGATTTGAGCATAGAAACCGCTCTGCTCCTAGAGCGCTGGCAAGGCATTGTAAACTCGATGGCTCAAGTCGC
GGAAGTGCCTTGTGTGCTGATTAATCGATTAGATAAAAACGAAATTTGTCAGGCTGTTGGCAGTGTGTCAGTACCAACTT
TTTATTGCGGTGAACCTGTTCCATTGGCACTTAACACTTATTGTTCCCAAGTCATTTCCAGTAACCAGCCATTACTAGTT
GAAAATGCAATCGGTACCCGATATGAAAACAATAACCCAACATTTGCAGCAGGCTTTAGTTATTACTATGGCCTGCCATT
GCTTTGGCCTAGCGGAAAAACTTTCGGTACTTTGTGTATGTTGGACTTTTCAAGCCCAGATCGGGCATCACAACACTGTT
CCTTACTCACACTTTTTAAGCAGGCCATTGAATACGATTTACAGATGCTTCAACAACAGCAAGATCTGCTAAAGCGTGAG
CAACAAGCAGACAAAAAATTTATACAACTATTCAATGAGATGTCAAATAGGATAAGACCGGTAACTAATAATAAGTTGCT
TCAATCTGAGTTGTTTGTACTTTTGACAAGCCAATACCAATACTGGCATCAGGAACTGGATAAGCAGCTTAATCAAACCG
TCCTGACTGATGAAAACTCCATTCATATAGCGGCACTGGTTCGAATTTGGTCAAATTTGTTGGCGATTGCCCATGAAACA
GAATGGTTGAGAGCTACGGCAGTTCTAGAACCTTATAGTTGTGATGCTGTTGCGTCACTGGTCAATGCAACTCCATTATT
AGAACAAGCAGTGTATAAAACAGCGCTGACCCTTGGTGCTGATCTCGTTTTGAGGAGTCATTTGCCTAATCCACTGTTAC
TAAGTGGGAAACCAGAGTTATGGTCTCTGATAGGACTAGCTATCACGAGCTTTTTAGTTGTTGGCGCCAGCGGTACAAGT
ATAACTATTTTTGTCAGTAACCGATTAAAAGGTAAGTACAGAGTTTTGGAATGGTCCCTTCTTGTAAAAGGCCAGACGAT
GCCGCTGCGTTTTACCCGCGATAATCAAGCGCTTTATGGTTTTGCAACAGTATGTGCCGAGTTAGCGGGTGCTGTTCTTG
AATCTGGTGAGTGGCAATTAACTGAGAGTCTTCAGCAACAGAGTCGTTATCTCAACTCAAATCGTGATCACGTTGACGAC
ATTGAAAGCAGGAATGCTTCAAGAACTGCTAATGGCATAACCAGGCTTATCTGCTTATCGATACCGGTGATGGGAGACGA
TTTATAA

Upstream 100 bases:

>100_bases
TTCCCTGATTGACATCAATCACTTTGTTTCCTGTTTGATACTCTGAGATAAACAAGATCGAATGATGCAAAAGGGGACTA
TTTAAATACTGAGGGAACAA

Downstream 100 bases:

>100_bases
ACACTCAGCGATGATCAGCGAAGTTGTGTTTTAGTTTTCTTGTTGGCACTACATCCGGTATGGCGGCCTTTAATCTGAGA
GTGACACTTGGGATAACTGA

Product: hypothetical protein

Products: NA

Alternate protein names: Diguanylate Cyclase/Phosphodiesterase With GAF Sensor; GGDEF Domain-Containing Protein; Diguanylate Cyclase/Phosphodiesterase; Diguanylate Cyclase And Metal Dependent Phosphohydrolase; GAF Sensor Hybrid Histidine Kinase; Histidine Kinase; Ggdef Family Protein; GAF/GGDEF Domain-Containing Protein; GGDEF Domain Protein; GAF Domain-Containing Protein; Histidine Kinase Dimerization/Phosphoacceptor; Two-Component Histidine Kinase; Signaling Protein; EAL Domain-Containing Protein

Number of amino acids: Translated: 428; Mature: 427

Protein sequence:

>428_residues
MAVDLSIETALLLERWQGIVNSMAQVAEVPCVLINRLDKNEICQAVGSVSVPTFYCGEPVPLALNTYCSQVISSNQPLLV
ENAIGTRYENNNPTFAAGFSYYYGLPLLWPSGKTFGTLCMLDFSSPDRASQHCSLLTLFKQAIEYDLQMLQQQQDLLKRE
QQADKKFIQLFNEMSNRIRPVTNNKLLQSELFVLLTSQYQYWHQELDKQLNQTVLTDENSIHIAALVRIWSNLLAIAHET
EWLRATAVLEPYSCDAVASLVNATPLLEQAVYKTALTLGADLVLRSHLPNPLLLSGKPELWSLIGLAITSFLVVGASGTS
ITIFVSNRLKGKYRVLEWSLLVKGQTMPLRFTRDNQALYGFATVCAELAGAVLESGEWQLTESLQQQSRYLNSNRDHVDD
IESRNASRTANGITRLICLSIPVMGDDL

Sequences:

>Translated_428_residues
MAVDLSIETALLLERWQGIVNSMAQVAEVPCVLINRLDKNEICQAVGSVSVPTFYCGEPVPLALNTYCSQVISSNQPLLV
ENAIGTRYENNNPTFAAGFSYYYGLPLLWPSGKTFGTLCMLDFSSPDRASQHCSLLTLFKQAIEYDLQMLQQQQDLLKRE
QQADKKFIQLFNEMSNRIRPVTNNKLLQSELFVLLTSQYQYWHQELDKQLNQTVLTDENSIHIAALVRIWSNLLAIAHET
EWLRATAVLEPYSCDAVASLVNATPLLEQAVYKTALTLGADLVLRSHLPNPLLLSGKPELWSLIGLAITSFLVVGASGTS
ITIFVSNRLKGKYRVLEWSLLVKGQTMPLRFTRDNQALYGFATVCAELAGAVLESGEWQLTESLQQQSRYLNSNRDHVDD
IESRNASRTANGITRLICLSIPVMGDDL
>Mature_427_residues
AVDLSIETALLLERWQGIVNSMAQVAEVPCVLINRLDKNEICQAVGSVSVPTFYCGEPVPLALNTYCSQVISSNQPLLVE
NAIGTRYENNNPTFAAGFSYYYGLPLLWPSGKTFGTLCMLDFSSPDRASQHCSLLTLFKQAIEYDLQMLQQQQDLLKREQ
QADKKFIQLFNEMSNRIRPVTNNKLLQSELFVLLTSQYQYWHQELDKQLNQTVLTDENSIHIAALVRIWSNLLAIAHETE
WLRATAVLEPYSCDAVASLVNATPLLEQAVYKTALTLGADLVLRSHLPNPLLLSGKPELWSLIGLAITSFLVVGASGTSI
TIFVSNRLKGKYRVLEWSLLVKGQTMPLRFTRDNQALYGFATVCAELAGAVLESGEWQLTESLQQQSRYLNSNRDHVDDI
ESRNASRTANGITRLICLSIPVMGDDL

Specific function: Unknown

COG id: COG2203

COG function: function code T; FOG: GAF domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 47811; Mature: 47680

Theoretical pI: Translated: 5.10; Mature: 5.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAVDLSIETALLLERWQGIVNSMAQVAEVPCVLINRLDKNEICQAVGSVSVPTFYCGEPV
CEEECCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHCCCHHHHHHHHCCCCCCEEECCCCC
PLALNTYCSQVISSNQPLLVENAIGTRYENNNPTFAAGFSYYYGLPLLWPSGKTFGTLCM
CHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCEEECCHHHCCCEEECCCCCCEEEEEE
LDFSSPDRASQHCSLLTLFKQAIEYDLQMLQQQQDLLKREQQADKKFIQLFNEMSNRIRP
EECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
VTNNKLLQSELFVLLTSQYQYWHQELDKQLNQTVLTDENSIHIAALVRIWSNLLAIAHET
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHHHHH
EWLRATAVLEPYSCDAVASLVNATPLLEQAVYKTALTLGADLVLRSHLPNPLLLSGKPEL
HHHHHHHEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCHHH
WSLIGLAITSFLVVGASGTSITIFVSNRLKGKYRVLEWSLLVKGQTMPLRFTRDNQALYG
HHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCEEEEEEEEEEECCCCEEEEECCCCHHHH
FATVCAELAGAVLESGEWQLTESLQQQSRYLNSNRDHVDDIESRNASRTANGITRLICLS
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCHHHHHHHHHHHHC
IPVMGDDL
CCCCCCCC
>Mature Secondary Structure 
AVDLSIETALLLERWQGIVNSMAQVAEVPCVLINRLDKNEICQAVGSVSVPTFYCGEPV
EEECCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHCCCHHHHHHHHCCCCCCEEECCCCC
PLALNTYCSQVISSNQPLLVENAIGTRYENNNPTFAAGFSYYYGLPLLWPSGKTFGTLCM
CHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCEEECCHHHCCCEEECCCCCCEEEEEE
LDFSSPDRASQHCSLLTLFKQAIEYDLQMLQQQQDLLKREQQADKKFIQLFNEMSNRIRP
EECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
VTNNKLLQSELFVLLTSQYQYWHQELDKQLNQTVLTDENSIHIAALVRIWSNLLAIAHET
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHHHHH
EWLRATAVLEPYSCDAVASLVNATPLLEQAVYKTALTLGADLVLRSHLPNPLLLSGKPEL
HHHHHHHEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCHHH
WSLIGLAITSFLVVGASGTSITIFVSNRLKGKYRVLEWSLLVKGQTMPLRFTRDNQALYG
HHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCEEEEEEEEEEECCCCEEEEECCCCHHHH
FATVCAELAGAVLESGEWQLTESLQQQSRYLNSNRDHVDDIESRNASRTANGITRLICLS
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCHHHHHHHHHHHHC
IPVMGDDL
CCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA