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The map label for this gene is zntR [H]

Identifier: 117676260

GI number: 117676260

Start: 213486

End: 213926

Strand: Direct

Name: zntR [H]

Synonym: Shewana3_4323

Alternate gene names: 117676260

Gene position: 213486-213926 (Clockwise)

Preceding gene: 117676256

Following gene: 117676266

Centisome position: 76.53

GC content: 55.78

Gene sequence:

>441_bases
ATGGAAATCAGAATTGGCGACCTCGCCAAGCGCTCTGGGTGCGAGGTCGTGACCATCCGCTACTACGAGAAGGAAGGGCT
ACTGCCGAAGCCAGCGCGAAGCGGTGGCAACTTCCGGCTGTACGGTGAGGCGCACATTGAGCGCTTGCAATTCATCCGTC
ATTGCCGTTCGCTCGAGATGACGTTGAGCGAGATTCGCGCATTGCTGGGTCTGCGAGACAACCCGATGCAGGACTGTGGG
GAGGTCAACACGCTGCTGGAGGCCCATATTCAACAGGTGGAAATGCGTGTGTCCGCGCTGTTGCAGTTAAAACGGCACTT
GGTTGATTTGCGCGAGAAGTGTTCTGGCTCTCGATCTGTAGAGGCGTGCGGCATTTTGCAAGGGTTGGGCAATTGCAATT
GCCATGGTGAAAGTGCCACGAACAGTCAAACATCTGGGTAA

Upstream 100 bases:

>100_bases
AGCGCATTCGCTCATGAGTAACTCCTGAAAATCTTCTATTCAGCCTCCATTAAAATCTCTATAGTCACTATAGAGTCAAG
TGATAATTGGAGATTGATGC

Downstream 100 bases:

>100_bases
GTAAGGGCTTAGCGTGCTTTATTTTCCGTTTTCTGAGGCGACCCCTATACCGATAAATACACAGGAAATTTTTTTCACAA
AAGTGTATGAATGTTGATAG

Product: MerR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 146; Mature: 146

Protein sequence:

>146_residues
MEIRIGDLAKRSGCEVVTIRYYEKEGLLPKPARSGGNFRLYGEAHIERLQFIRHCRSLEMTLSEIRALLGLRDNPMQDCG
EVNTLLEAHIQQVEMRVSALLQLKRHLVDLREKCSGSRSVEACGILQGLGNCNCHGESATNSQTSG

Sequences:

>Translated_146_residues
MEIRIGDLAKRSGCEVVTIRYYEKEGLLPKPARSGGNFRLYGEAHIERLQFIRHCRSLEMTLSEIRALLGLRDNPMQDCG
EVNTLLEAHIQQVEMRVSALLQLKRHLVDLREKCSGSRSVEACGILQGLGNCNCHGESATNSQTSG
>Mature_146_residues
MEIRIGDLAKRSGCEVVTIRYYEKEGLLPKPARSGGNFRLYGEAHIERLQFIRHCRSLEMTLSEIRALLGLRDNPMQDCG
EVNTLLEAHIQQVEMRVSALLQLKRHLVDLREKCSGSRSVEACGILQGLGNCNCHGESATNSQTSG

Specific function: Transcriptional regulator [H]

COG id: COG0789

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH merR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1789687, Length=128, Percent_Identity=40.625, Blast_Score=94, Evalue=3e-21,
Organism=Escherichia coli, GI1786695, Length=133, Percent_Identity=29.3233082706767, Blast_Score=72, Evalue=1e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009061
- InterPro:   IPR000551
- InterPro:   IPR015358 [H]

Pfam domain/function: PF00376 MerR; PF09278 MerR-DNA-bind [H]

EC number: NA

Molecular weight: Translated: 16283; Mature: 16283

Theoretical pI: Translated: 7.77; Mature: 7.77

Prosite motif: PS50937 HTH_MERR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.8 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
7.5 %Cys+Met (Translated Protein)
4.8 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
7.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEIRIGDLAKRSGCEVVTIRYYEKEGLLPKPARSGGNFRLYGEAHIERLQFIRHCRSLEM
CCCCCCCHHHCCCCCEEEEEEECCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHH
TLSEIRALLGLRDNPMQDCGEVNTLLEAHIQQVEMRVSALLQLKRHLVDLREKCSGSRSV
HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH
EACGILQGLGNCNCHGESATNSQTSG
HHHHHHHHCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MEIRIGDLAKRSGCEVVTIRYYEKEGLLPKPARSGGNFRLYGEAHIERLQFIRHCRSLEM
CCCCCCCHHHCCCCCEEEEEEECCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHH
TLSEIRALLGLRDNPMQDCGEVNTLLEAHIQQVEMRVSALLQLKRHLVDLREKCSGSRSV
HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH
EACGILQGLGNCNCHGESATNSQTSG
HHHHHHHHCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]