Definition Shewanella sp. ANA-3 plasmid 1, complete sequence.
Accession NC_008573
Length 278,942

Click here to switch to the map view.

The map label for this gene is 117676143

Identifier: 117676143

GI number: 117676143

Start: 66304

End: 66699

Strand: Reverse

Name: 117676143

Synonym: Shewana3_4203

Alternate gene names: NA

Gene position: 66699-66304 (Counterclockwise)

Preceding gene: 117676144

Following gene: 117676142

Centisome position: 23.91

GC content: 43.43

Gene sequence:

>396_bases
ATGGCTAAAAAATATCAAACCCGCGAGAAATCGTTGGGTGAATTAGGCATTCATGAATCTGTTGATTGGAGCGCTGAACA
ATGTCGCGCTTTTTGGGACGGAATCATTTCTGCAAATCTGGAGTTACTGAGAGATTCGGTGACTGAAGCGGAAGACATTC
TTGACTGGGTGTTTTCAGAGCAGTTTCTAGTTGCTTGTCGTTATGCTGGTTTAGATTGTGATTTACTGAGGGATGGTGTC
TTAGACGTCGTTGACCCAGTTGAAATCGTCAATGCCAGAATAAAGCTCAACAACGAAACTTGGTCTAAAAAACGCACTAA
GCAGCAATCGCAATTGCGAAATGGCGAAGGCGTTTGGCAGACTATTTCTTGGGGCGAATCATTGGCACTATTTTGA

Upstream 100 bases:

>100_bases
TCTCCCGAAAGGGCGCTTTGATGCTGCGTTAAGCATTTTTTCCCTTGTGGGTTCTGCCCACTAAAGGGCCGTACCCGCAA
CTTATTTATTTGGAGTGGGT

Downstream 100 bases:

>100_bases
GTCAGTATCGCTCCAGCATATCCAATTGCATCAGTAAAATCCGAGCCATAAAACGCCAACGGAGTTTGACTGCTGCAGCT
GGTGAACAAATCAATTTATT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 131; Mature: 130

Protein sequence:

>131_residues
MAKKYQTREKSLGELGIHESVDWSAEQCRAFWDGIISANLELLRDSVTEAEDILDWVFSEQFLVACRYAGLDCDLLRDGV
LDVVDPVEIVNARIKLNNETWSKKRTKQQSQLRNGEGVWQTISWGESLALF

Sequences:

>Translated_131_residues
MAKKYQTREKSLGELGIHESVDWSAEQCRAFWDGIISANLELLRDSVTEAEDILDWVFSEQFLVACRYAGLDCDLLRDGV
LDVVDPVEIVNARIKLNNETWSKKRTKQQSQLRNGEGVWQTISWGESLALF
>Mature_130_residues
AKKYQTREKSLGELGIHESVDWSAEQCRAFWDGIISANLELLRDSVTEAEDILDWVFSEQFLVACRYAGLDCDLLRDGVL
DVVDPVEIVNARIKLNNETWSKKRTKQQSQLRNGEGVWQTISWGESLALF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14993; Mature: 14862

Theoretical pI: Translated: 4.45; Mature: 4.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKKYQTREKSLGELGIHESVDWSAEQCRAFWDGIISANLELLRDSVTEAEDILDWVFSE
CCCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QFLVACRYAGLDCDLLRDGVLDVVDPVEIVNARIKLNNETWSKKRTKQQSQLRNGEGVWQ
HHHHHHHHCCCCHHHHHCCHHHHHCHHHHHHHHEEECCCHHHHHHHHHHHHHCCCCCCCC
TISWGESLALF
CCCCCCCCCCC
>Mature Secondary Structure 
AKKYQTREKSLGELGIHESVDWSAEQCRAFWDGIISANLELLRDSVTEAEDILDWVFSE
CCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QFLVACRYAGLDCDLLRDGVLDVVDPVEIVNARIKLNNETWSKKRTKQQSQLRNGEGVWQ
HHHHHHHHCCCCHHHHHCCHHHHHCHHHHHHHHEEECCCHHHHHHHHHHHHHCCCCCCCC
TISWGESLALF
CCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA