| Definition | Shewanella sp. ANA-3 plasmid 1, complete sequence. |
|---|---|
| Accession | NC_008573 |
| Length | 278,942 |
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The map label for this gene is 117676143
Identifier: 117676143
GI number: 117676143
Start: 66304
End: 66699
Strand: Reverse
Name: 117676143
Synonym: Shewana3_4203
Alternate gene names: NA
Gene position: 66699-66304 (Counterclockwise)
Preceding gene: 117676144
Following gene: 117676142
Centisome position: 23.91
GC content: 43.43
Gene sequence:
>396_bases ATGGCTAAAAAATATCAAACCCGCGAGAAATCGTTGGGTGAATTAGGCATTCATGAATCTGTTGATTGGAGCGCTGAACA ATGTCGCGCTTTTTGGGACGGAATCATTTCTGCAAATCTGGAGTTACTGAGAGATTCGGTGACTGAAGCGGAAGACATTC TTGACTGGGTGTTTTCAGAGCAGTTTCTAGTTGCTTGTCGTTATGCTGGTTTAGATTGTGATTTACTGAGGGATGGTGTC TTAGACGTCGTTGACCCAGTTGAAATCGTCAATGCCAGAATAAAGCTCAACAACGAAACTTGGTCTAAAAAACGCACTAA GCAGCAATCGCAATTGCGAAATGGCGAAGGCGTTTGGCAGACTATTTCTTGGGGCGAATCATTGGCACTATTTTGA
Upstream 100 bases:
>100_bases TCTCCCGAAAGGGCGCTTTGATGCTGCGTTAAGCATTTTTTCCCTTGTGGGTTCTGCCCACTAAAGGGCCGTACCCGCAA CTTATTTATTTGGAGTGGGT
Downstream 100 bases:
>100_bases GTCAGTATCGCTCCAGCATATCCAATTGCATCAGTAAAATCCGAGCCATAAAACGCCAACGGAGTTTGACTGCTGCAGCT GGTGAACAAATCAATTTATT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 131; Mature: 130
Protein sequence:
>131_residues MAKKYQTREKSLGELGIHESVDWSAEQCRAFWDGIISANLELLRDSVTEAEDILDWVFSEQFLVACRYAGLDCDLLRDGV LDVVDPVEIVNARIKLNNETWSKKRTKQQSQLRNGEGVWQTISWGESLALF
Sequences:
>Translated_131_residues MAKKYQTREKSLGELGIHESVDWSAEQCRAFWDGIISANLELLRDSVTEAEDILDWVFSEQFLVACRYAGLDCDLLRDGV LDVVDPVEIVNARIKLNNETWSKKRTKQQSQLRNGEGVWQTISWGESLALF >Mature_130_residues AKKYQTREKSLGELGIHESVDWSAEQCRAFWDGIISANLELLRDSVTEAEDILDWVFSEQFLVACRYAGLDCDLLRDGVL DVVDPVEIVNARIKLNNETWSKKRTKQQSQLRNGEGVWQTISWGESLALF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14993; Mature: 14862
Theoretical pI: Translated: 4.45; Mature: 4.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKKYQTREKSLGELGIHESVDWSAEQCRAFWDGIISANLELLRDSVTEAEDILDWVFSE CCCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QFLVACRYAGLDCDLLRDGVLDVVDPVEIVNARIKLNNETWSKKRTKQQSQLRNGEGVWQ HHHHHHHHCCCCHHHHHCCHHHHHCHHHHHHHHEEECCCHHHHHHHHHHHHHCCCCCCCC TISWGESLALF CCCCCCCCCCC >Mature Secondary Structure AKKYQTREKSLGELGIHESVDWSAEQCRAFWDGIISANLELLRDSVTEAEDILDWVFSE CCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QFLVACRYAGLDCDLLRDGVLDVVDPVEIVNARIKLNNETWSKKRTKQQSQLRNGEGVWQ HHHHHHHHCCCCHHHHHCCHHHHHCHHHHHHHHEEECCCHHHHHHHHHHHHHCCCCCCCC TISWGESLALF CCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA