| Definition | Shewanella sp. ANA-3 plasmid 1, complete sequence. |
|---|---|
| Accession | NC_008573 |
| Length | 278,942 |
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The map label for this gene is 117676133
Identifier: 117676133
GI number: 117676133
Start: 55904
End: 56452
Strand: Reverse
Name: 117676133
Synonym: Shewana3_4193
Alternate gene names: NA
Gene position: 56452-55904 (Counterclockwise)
Preceding gene: 117676134
Following gene: 117676132
Centisome position: 20.24
GC content: 44.26
Gene sequence:
>549_bases ATGGGATTTTTCTCTTGGAAAACAGCTGACAAAAACGAGTCTATCTACAACATCTATTCTGGCTGCGAAGTCAAAGAAGT TTATATGTTGCAGCCTCACGACCAGCCACCAATCAAAGAACCCGAATATGAGGGTTGTGGCGTATTTGGTGGTGTAGATG CGTATGTCTGGCTAGCTCAAGCCAATGCGGAGCATTACGGTTTCGACAGTAATGAGCTAGACAGCGAAGAGCTACGCGGT CTCGGGATTGCGATTGAGTTAGGTGATGTCTTACAAGACACGCAAACAGGCGATTATTGGCATCTATGCAGTGATAATCG CATGTTAATACCTGGCAAATATGCAGCATGTAATTACGCTGAAGTGATCCCCGAGTTAGGTGATTGTGCAAACAATCTGA TCCAATCAGGTCGTTTTAAGCAGGTGAGAATTAAGGCGATAAAGCCTGCACTTTACCTACTTAAGTTTTCACATAACCCT CGTGCCATTTACGAAGATTTACCGCCCTCAAAGCAATGCCCAAAACAGGGATTTTTCGTAAAGTGGTGA
Upstream 100 bases:
>100_bases AGCTTAACATCAAAATTTAACCCTTGGGGGGGGGTGCCATGCCCCCAAGGGCCATGCTCACCCCTTTTTTATACCTGCCA ACGGGCAATAGGAGTGAGTT
Downstream 100 bases:
>100_bases GAGCGAGTAATCGTTCCGTTGTTAGTCGTTTACTTTTTTAACCCTTGGGGGTGAGTTTAGCCCCCTCCGGGCCATAACTC CCCCTTTTTTAGTTTATGCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 182; Mature: 181
Protein sequence:
>182_residues MGFFSWKTADKNESIYNIYSGCEVKEVYMLQPHDQPPIKEPEYEGCGVFGGVDAYVWLAQANAEHYGFDSNELDSEELRG LGIAIELGDVLQDTQTGDYWHLCSDNRMLIPGKYAACNYAEVIPELGDCANNLIQSGRFKQVRIKAIKPALYLLKFSHNP RAIYEDLPPSKQCPKQGFFVKW
Sequences:
>Translated_182_residues MGFFSWKTADKNESIYNIYSGCEVKEVYMLQPHDQPPIKEPEYEGCGVFGGVDAYVWLAQANAEHYGFDSNELDSEELRG LGIAIELGDVLQDTQTGDYWHLCSDNRMLIPGKYAACNYAEVIPELGDCANNLIQSGRFKQVRIKAIKPALYLLKFSHNP RAIYEDLPPSKQCPKQGFFVKW >Mature_181_residues GFFSWKTADKNESIYNIYSGCEVKEVYMLQPHDQPPIKEPEYEGCGVFGGVDAYVWLAQANAEHYGFDSNELDSEELRGL GIAIELGDVLQDTQTGDYWHLCSDNRMLIPGKYAACNYAEVIPELGDCANNLIQSGRFKQVRIKAIKPALYLLKFSHNPR AIYEDLPPSKQCPKQGFFVKW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20639; Mature: 20507
Theoretical pI: Translated: 4.74; Mature: 4.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.3 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 3.3 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGFFSWKTADKNESIYNIYSGCEVKEVYMLQPHDQPPIKEPEYEGCGVFGGVDAYVWLAQ CCCCCCCCCCCCCCEEEECCCCCEEEEEEECCCCCCCCCCCCCCCCCEECCCCEEEEEEE ANAEHYGFDSNELDSEELRGLGIAIELGDVLQDTQTGDYWHLCSDNRMLIPGKYAACNYA CCCCCCCCCCCCCCHHHHCCEEEEEEECHHHHCCCCCCEEEEECCCEEECCCCCCCCCHH EVIPELGDCANNLIQSGRFKQVRIKAIKPALYLLKFSHNPRAIYEDLPPSKQCPKQGFFV HHHHHHHHHHHHHHHCCCCEEEEEEECCCEEEEEEECCCCCCHHHCCCCCCCCCCCCCEE KW EC >Mature Secondary Structure GFFSWKTADKNESIYNIYSGCEVKEVYMLQPHDQPPIKEPEYEGCGVFGGVDAYVWLAQ CCCCCCCCCCCCCEEEECCCCCEEEEEEECCCCCCCCCCCCCCCCCEECCCCEEEEEEE ANAEHYGFDSNELDSEELRGLGIAIELGDVLQDTQTGDYWHLCSDNRMLIPGKYAACNYA CCCCCCCCCCCCCCHHHHCCEEEEEEECHHHHCCCCCCEEEEECCCEEECCCCCCCCCHH EVIPELGDCANNLIQSGRFKQVRIKAIKPALYLLKFSHNPRAIYEDLPPSKQCPKQGFFV HHHHHHHHHHHHHHHCCCCEEEEEEECCCEEEEEEECCCCCCHHHCCCCCCCCCCCCCEE KW EC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA