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The map label for this gene is 117676123

Identifier: 117676123

GI number: 117676123

Start: 49029

End: 49559

Strand: Direct

Name: 117676123

Synonym: Shewana3_4183

Alternate gene names: NA

Gene position: 49029-49559 (Clockwise)

Preceding gene: 117676115

Following gene: 117676128

Centisome position: 17.58

GC content: 46.89

Gene sequence:

>531_bases
ATGTCAACTGTTGCAGATTTGAACGACACTTACTTAAGTAATGGCTATCGAGTACCCCAGCAGGAACTTGAGTTTTGTAT
TGCTAAAGCTGCTCGGCCTATCGACCCAGACTTATTACTCGCGGTACTGGTTGCTGAGGGCGGCAGACGTGGGGCGATTG
TTCAGAATAAGAATGGTTCGTTTGATCTGGGCGTTGGTCAAATCAACACGATTCAGTATACGGAGACATGGTTTAAGTCG
CGCTACCCTGATTGGCGTCAAGTGGCCCAGGATACGTGTACAGGCGTTGCTGCTGCCGCTGACGTATTGCTGCGCCGTAT
GTCAGAATTGAACGTAGGTCAGTCGGTGTGGGAGGCGGTTGGTCATTACAACTCTAAAACTGCCACGGTAAAAATCCAAT
ACTTACAGAATGTAATGCAGATTTATACCAGACTTTCACAGAACAAGGGGACTGAATATCGTCCTTGGATGACCATTACC
CACAAGCAAAAGCACTTCTTTACTTGGAGTAATAGAGAATCAGAGCGCTAA

Upstream 100 bases:

>100_bases
TCCAAAATCGTTGCGCCGCTGAATGCCATTCGAATGCTTCTCTAATAAATATCTCGTGTTATACTCGCCGATATTACACA
TTTTTATAAACACAAACAAC

Downstream 100 bases:

>100_bases
TTGACTGCTCCCCTCCCTAAAGGAAGGGGATTCTTGTTTCAAGGCGTTATGCCCGAAGTTCATTAGAACAATCGGGACTT
ACTTACGCTCCACAAGCTAA

Product: lytic transglycosylase, catalytic

Products: NA

Alternate protein names: Pilin Biogenesis Protein; Lipoprotein

Number of amino acids: Translated: 176; Mature: 175

Protein sequence:

>176_residues
MSTVADLNDTYLSNGYRVPQQELEFCIAKAARPIDPDLLLAVLVAEGGRRGAIVQNKNGSFDLGVGQINTIQYTETWFKS
RYPDWRQVAQDTCTGVAAAADVLLRRMSELNVGQSVWEAVGHYNSKTATVKIQYLQNVMQIYTRLSQNKGTEYRPWMTIT
HKQKHFFTWSNRESER

Sequences:

>Translated_176_residues
MSTVADLNDTYLSNGYRVPQQELEFCIAKAARPIDPDLLLAVLVAEGGRRGAIVQNKNGSFDLGVGQINTIQYTETWFKS
RYPDWRQVAQDTCTGVAAAADVLLRRMSELNVGQSVWEAVGHYNSKTATVKIQYLQNVMQIYTRLSQNKGTEYRPWMTIT
HKQKHFFTWSNRESER
>Mature_175_residues
STVADLNDTYLSNGYRVPQQELEFCIAKAARPIDPDLLLAVLVAEGGRRGAIVQNKNGSFDLGVGQINTIQYTETWFKSR
YPDWRQVAQDTCTGVAAAADVLLRRMSELNVGQSVWEAVGHYNSKTATVKIQYLQNVMQIYTRLSQNKGTEYRPWMTITH
KQKHFFTWSNRESER

Specific function: Unknown

COG id: COG0741

COG function: function code M; Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20081; Mature: 19950

Theoretical pI: Translated: 9.02; Mature: 9.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTVADLNDTYLSNGYRVPQQELEFCIAKAARPIDPDLLLAVLVAEGGRRGAIVQNKNGS
CCCCCCCCHHHHCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCEEECCCCC
FDLGVGQINTIQYTETWFKSRYPDWRQVAQDTCTGVAAAADVLLRRMSELNVGQSVWEAV
EEECCCCEEEEEHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
GHYNSKTATVKIQYLQNVMQIYTRLSQNKGTEYRPWMTITHKQKHFFTWSNRESER
HCCCCCEEEEEHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCEEEEECCCCCCC
>Mature Secondary Structure 
STVADLNDTYLSNGYRVPQQELEFCIAKAARPIDPDLLLAVLVAEGGRRGAIVQNKNGS
CCCCCCCHHHHCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCEEECCCCC
FDLGVGQINTIQYTETWFKSRYPDWRQVAQDTCTGVAAAADVLLRRMSELNVGQSVWEAV
EEECCCCEEEEEHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
GHYNSKTATVKIQYLQNVMQIYTRLSQNKGTEYRPWMTITHKQKHFFTWSNRESER
HCCCCCEEEEEHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA