Definition Shewanella sp. ANA-3 plasmid 1, complete sequence.
Accession NC_008573
Length 278,942

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The map label for this gene is 117676115

Identifier: 117676115

GI number: 117676115

Start: 41152

End: 42258

Strand: Direct

Name: 117676115

Synonym: Shewana3_4175

Alternate gene names: NA

Gene position: 41152-42258 (Clockwise)

Preceding gene: 117676111

Following gene: 117676123

Centisome position: 14.75

GC content: 46.97

Gene sequence:

>1107_bases
ATGGAACAATTGGCAGTGAAACCGAAGGCAACTCTTGAGGAAGTGACTAAGCTCGCGAATGAAATGCTTAAAAACGGTGT
CGAGCCAACGACACGTAACTTGAGCGTTCATCTGCAGGGCAGAACATCGTCGATCCAAGGGTTCTTGATTGAGTACAAAA
ATAATCTTGAGCATAGAAAAAATGCTATCGCGGAAGAGGTTGGAAGCCTTGCCGTAGCTAAGTTGCTGTCTCAAGAACTG
TTGCTCATGATTGACCGTCGTAACGAATCGCTGACCGAGCAAGTTGCCCAGTTGACGCGAAACCTTGATGAAACGCTATC
GCTGTTAAGTGACAGTGAAGATAAGTTAGAAAGCGTCTTGAATACTACGGCGGCTCAAGTTGCGGAGATTGAAACCAGCA
CCGCAGCCAAGGTCGAAAAGGCCCAATCCGCTGTAAGCCTGATAGAGCAACAACTGCGAGAGTTAAAGGCCACCAGCGAA
AAGGCCATTGATGACGCAAGAAATCACGCAAAAGCCGAAGTATTAAAAGCAGAAGCATTAGTAGACGCAGCGAATGGGCG
CGTTGCACAAGCAGAGACCGAATTAAGGGCATCTCGAGAGCAAATTAAATTACTCAGCATCGATGTTGCGAAGCGTGAAC
TAGAACAGCGAGAGTTAGAGCAAGCGAAGGCCACCATTGCAACTCTGCAGGCCACACTATCAAAGCAGCAAGACCAGATC
TCATACACCACAGCGAACCTTGAGCGATTGACGCAGGACCGAACAGAATTAAAGGCTACAGAAGCCAAGCTAGGTAAGAC
TGCGGAAAATTTAACGGCAACCTTAGTATCGGTGCGCAATGAATTAGCAGACTCACGAGCAAAACTAGCCGAGGTTAATG
CAGAAAAGTTGGCATTTGAGCGTGATACGCAAAGACTTAATACAGATCTCAATAGTTATCGTCAGCAAGCAAACCAACTC
GGAAGCGTCCAAGCTGAGCTTATTAGCGTCGAAAAACAACTGAATCAGGTGAAATTAGATCTATCTCAATCCGAGCGTGA
ACGGGAGATATTATCCCAAGCTCTAGCTGCCAACCGTGTGGCGGGCAGTCAGACCGAGAAAAAATAA

Upstream 100 bases:

>100_bases
TCCGTAAAAACATCGTTTCCATTGCAGAGTGTTGAATAACTGGCTACACTGGGATTTATCGATGTAAGTCATTAACTTTG
AAGATGTTTGAGGCAAGCAA

Downstream 100 bases:

>100_bases
GATATTTCGAAGGATGTTCGTGTTGGAGAGGAATAACTTTCATACTCCTTGTGGCTTACTTCTGGACAAAAGCGTGATAG
ACCCTTTGCTCTAACTCGTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 368; Mature: 368

Protein sequence:

>368_residues
MEQLAVKPKATLEEVTKLANEMLKNGVEPTTRNLSVHLQGRTSSIQGFLIEYKNNLEHRKNAIAEEVGSLAVAKLLSQEL
LLMIDRRNESLTEQVAQLTRNLDETLSLLSDSEDKLESVLNTTAAQVAEIETSTAAKVEKAQSAVSLIEQQLRELKATSE
KAIDDARNHAKAEVLKAEALVDAANGRVAQAETELRASREQIKLLSIDVAKRELEQRELEQAKATIATLQATLSKQQDQI
SYTTANLERLTQDRTELKATEAKLGKTAENLTATLVSVRNELADSRAKLAEVNAEKLAFERDTQRLNTDLNSYRQQANQL
GSVQAELISVEKQLNQVKLDLSQSEREREILSQALAANRVAGSQTEKK

Sequences:

>Translated_368_residues
MEQLAVKPKATLEEVTKLANEMLKNGVEPTTRNLSVHLQGRTSSIQGFLIEYKNNLEHRKNAIAEEVGSLAVAKLLSQEL
LLMIDRRNESLTEQVAQLTRNLDETLSLLSDSEDKLESVLNTTAAQVAEIETSTAAKVEKAQSAVSLIEQQLRELKATSE
KAIDDARNHAKAEVLKAEALVDAANGRVAQAETELRASREQIKLLSIDVAKRELEQRELEQAKATIATLQATLSKQQDQI
SYTTANLERLTQDRTELKATEAKLGKTAENLTATLVSVRNELADSRAKLAEVNAEKLAFERDTQRLNTDLNSYRQQANQL
GSVQAELISVEKQLNQVKLDLSQSEREREILSQALAANRVAGSQTEKK
>Mature_368_residues
MEQLAVKPKATLEEVTKLANEMLKNGVEPTTRNLSVHLQGRTSSIQGFLIEYKNNLEHRKNAIAEEVGSLAVAKLLSQEL
LLMIDRRNESLTEQVAQLTRNLDETLSLLSDSEDKLESVLNTTAAQVAEIETSTAAKVEKAQSAVSLIEQQLRELKATSE
KAIDDARNHAKAEVLKAEALVDAANGRVAQAETELRASREQIKLLSIDVAKRELEQRELEQAKATIATLQATLSKQQDQI
SYTTANLERLTQDRTELKATEAKLGKTAENLTATLVSVRNELADSRAKLAEVNAEKLAFERDTQRLNTDLNSYRQQANQL
GSVQAELISVEKQLNQVKLDLSQSEREREILSQALAANRVAGSQTEKK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40731; Mature: 40731

Theoretical pI: Translated: 5.08; Mature: 5.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
0.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEQLAVKPKATLEEVTKLANEMLKNGVEPTTRNLSVHLQGRTSSIQGFLIEYKNNLEHRK
CCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHH
NAIAEEVGSLAVAKLLSQELLLMIDRRNESLTEQVAQLTRNLDETLSLLSDSEDKLESVL
HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
NTTAAQVAEIETSTAAKVEKAQSAVSLIEQQLRELKATSEKAIDDARNHAKAEVLKAEAL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VDAANGRVAQAETELRASREQIKLLSIDVAKRELEQRELEQAKATIATLQATLSKQQDQI
HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SYTTANLERLTQDRTELKATEAKLGKTAENLTATLVSVRNELADSRAKLAEVNAEKLAFE
HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
RDTQRLNTDLNSYRQQANQLGSVQAELISVEKQLNQVKLDLSQSEREREILSQALAANRV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AGSQTEKK
CCCCCCCC
>Mature Secondary Structure
MEQLAVKPKATLEEVTKLANEMLKNGVEPTTRNLSVHLQGRTSSIQGFLIEYKNNLEHRK
CCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHH
NAIAEEVGSLAVAKLLSQELLLMIDRRNESLTEQVAQLTRNLDETLSLLSDSEDKLESVL
HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
NTTAAQVAEIETSTAAKVEKAQSAVSLIEQQLRELKATSEKAIDDARNHAKAEVLKAEAL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VDAANGRVAQAETELRASREQIKLLSIDVAKRELEQRELEQAKATIATLQATLSKQQDQI
HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SYTTANLERLTQDRTELKATEAKLGKTAENLTATLVSVRNELADSRAKLAEVNAEKLAFE
HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
RDTQRLNTDLNSYRQQANQLGSVQAELISVEKQLNQVKLDLSQSEREREILSQALAANRV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AGSQTEKK
CCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA