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The map label for this gene is czcB [H]

Identifier: 117676095

GI number: 117676095

Start: 16506

End: 17447

Strand: Reverse

Name: czcB [H]

Synonym: Shewana3_4155

Alternate gene names: 117676095

Gene position: 17447-16506 (Counterclockwise)

Preceding gene: 117676096

Following gene: 117676094

Centisome position: 6.25

GC content: 50.85

Gene sequence:

>942_bases
ATGAAATCAAATACCCAGTTAAAAAAATCATTTATCCGTCTAATTACGTGTTGCTTTGCGATCACCCTGTTGTCTGGACA
AACTTTCGCCGAGACGGGTCACGGAGAAGAGGAAGAGCACGGTGAAGAAGGCCACGTCGAGCTGACCCAGGAGCAGATAA
AACATGCCGGCATTACGCTGGCAACCGTTACCTCGGGCAGCATCCGCGATGTTTTGCCAGTATATGGCGTCGTCGCCACC
AACGCAGAGCGTGTACAGTCGGTAACGGCACGCTTCGACGGCGTTATTCGGGAAGTTAAAAAAAGTGTTGGTGATCCGGT
TCGCAAAGGCGAACCCCTGGTGACTGTGGAAGCGAATGAAAGTCTGAAAACCTATTCGATAGTATCCGCACTCAATGGTG
CCGTTACCCAGCGGAATGCAAACGCTGGCGAGCACACTACGGATATCCCGTTGTTGGTAGTACAGGATTTCTCAACGGTT
TGGGTGGAGCTGTCGGTTTTTCCCAAGGATGTTGCTCAGGTTGAATTAGGCCAGCGGGTTCGCATTCTCAGTCTCGATTC
GACCCATATCGCAGAGGGAAAAATCATCTATATTGCGCCGCTTGGCCAAACTGGTAATCAGGCCATTATGGCGCGCGCTT
TGATCGACAACCCGAATGGCATTTGGAAACCCGGTCTCTTTGTCAACGCGCAAATCACCCGCGCCGAAATAGCCGCTCCA
ATGGTGATCCGCAACGAAGCCTTGCAAATCGTCGAGGATAACCCTGTCGTTTTTGTTCGGGGTGAGGAAGGTTTTGAAGC
ACGTACAGTGACTTTGGGGCGAACCGACGGTGAGCTAACCGAAGTGGTGGCAGGTCTGTCCGCAGATGAAGTGTATGTCA
GCAAAAACAGTTTTATTTTGAAAGCGGAATTGGGTAAAGGGGAGGTTGGCGATGATGATTAA

Upstream 100 bases:

>100_bases
CAGCCGCCTTAACCTATGGTGCAGAAATTGAGCAGCTAACAGCAGAGCCCTTGGCCTTGACACAGTATGGCGAAGACAAC
ACATTTTCAGGAACCCCACA

Downstream 100 bases:

>100_bases
TAGCTCCCTGAAAGACATTCTGGATTCCATCGGCCGGAGCAGCATTCTATCGCCGCTCAACGAAGGAGTGTGTGATGATC
GATAAACTCATTCAATTTTC

Product: RND family efflux transporter MFP subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 313; Mature: 313

Protein sequence:

>313_residues
MKSNTQLKKSFIRLITCCFAITLLSGQTFAETGHGEEEEHGEEGHVELTQEQIKHAGITLATVTSGSIRDVLPVYGVVAT
NAERVQSVTARFDGVIREVKKSVGDPVRKGEPLVTVEANESLKTYSIVSALNGAVTQRNANAGEHTTDIPLLVVQDFSTV
WVELSVFPKDVAQVELGQRVRILSLDSTHIAEGKIIYIAPLGQTGNQAIMARALIDNPNGIWKPGLFVNAQITRAEIAAP
MVIRNEALQIVEDNPVVFVRGEEGFEARTVTLGRTDGELTEVVAGLSADEVYVSKNSFILKAELGKGEVGDDD

Sequences:

>Translated_313_residues
MKSNTQLKKSFIRLITCCFAITLLSGQTFAETGHGEEEEHGEEGHVELTQEQIKHAGITLATVTSGSIRDVLPVYGVVAT
NAERVQSVTARFDGVIREVKKSVGDPVRKGEPLVTVEANESLKTYSIVSALNGAVTQRNANAGEHTTDIPLLVVQDFSTV
WVELSVFPKDVAQVELGQRVRILSLDSTHIAEGKIIYIAPLGQTGNQAIMARALIDNPNGIWKPGLFVNAQITRAEIAAP
MVIRNEALQIVEDNPVVFVRGEEGFEARTVTLGRTDGELTEVVAGLSADEVYVSKNSFILKAELGKGEVGDDD
>Mature_313_residues
MKSNTQLKKSFIRLITCCFAITLLSGQTFAETGHGEEEEHGEEGHVELTQEQIKHAGITLATVTSGSIRDVLPVYGVVAT
NAERVQSVTARFDGVIREVKKSVGDPVRKGEPLVTVEANESLKTYSIVSALNGAVTQRNANAGEHTTDIPLLVVQDFSTV
WVELSVFPKDVAQVELGQRVRILSLDSTHIAEGKIIYIAPLGQTGNQAIMARALIDNPNGIWKPGLFVNAQITRAEIAAP
MVIRNEALQIVEDNPVVFVRGEEGFEARTVTLGRTDGELTEVVAGLSADEVYVSKNSFILKAELGKGEVGDDD

Specific function: CzcA and CzcB together would act in zinc efflux nearly as effectively as the complete czc efflux system (CzcABC). The CzcB protein is thought to funnel zinc cations to the CzcA transport protein [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005695
- InterPro:   IPR006143 [H]

Pfam domain/function: PF00529 HlyD [H]

EC number: NA

Molecular weight: Translated: 33805; Mature: 33805

Theoretical pI: Translated: 4.68; Mature: 4.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSNTQLKKSFIRLITCCFAITLLSGQTFAETGHGEEEEHGEEGHVELTQEQIKHAGITL
CCCCHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCHHCCCCCCEEECHHHHHHCCEEE
ATVTSGSIRDVLPVYGVVATNAERVQSVTARFDGVIREVKKSVGDPVRKGEPLVTVEANE
EEECCCCHHHHHHHHHEEECCHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCEEEEECCC
SLKTYSIVSALNGAVTQRNANAGEHTTDIPLLVVQDFSTVWVELSVFPKDVAQVELGQRV
CCHHHHHHHHHCCHHEECCCCCCCCCCCCCEEEEECCCEEEEEEEECCCHHHHHHCCCEE
RILSLDSTHIAEGKIIYIAPLGQTGNQAIMARALIDNPNGIWKPGLFVNAQITRAEIAAP
EEEEECCCEECCCEEEEEEECCCCCCHHEEEEEEECCCCCCCCCCEEEEEEEEHHHHHCC
MVIRNEALQIVEDNPVVFVRGEEGFEARTVTLGRTDGELTEVVAGLSADEVYVSKNSFIL
EEEECCCEEEEECCCEEEEECCCCCCEEEEEEECCCCHHHHHHHCCCCCEEEEECCCEEE
KAELGKGEVGDDD
EEECCCCCCCCCC
>Mature Secondary Structure
MKSNTQLKKSFIRLITCCFAITLLSGQTFAETGHGEEEEHGEEGHVELTQEQIKHAGITL
CCCCHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCHHCCCCCCEEECHHHHHHCCEEE
ATVTSGSIRDVLPVYGVVATNAERVQSVTARFDGVIREVKKSVGDPVRKGEPLVTVEANE
EEECCCCHHHHHHHHHEEECCHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCEEEEECCC
SLKTYSIVSALNGAVTQRNANAGEHTTDIPLLVVQDFSTVWVELSVFPKDVAQVELGQRV
CCHHHHHHHHHCCHHEECCCCCCCCCCCCCEEEEECCCEEEEEEEECCCHHHHHHCCCEE
RILSLDSTHIAEGKIIYIAPLGQTGNQAIMARALIDNPNGIWKPGLFVNAQITRAEIAAP
EEEEECCCEECCCEEEEEEECCCCCCHHEEEEEEECCCCCCCCCCEEEEEEEEHHHHHCC
MVIRNEALQIVEDNPVVFVRGEEGFEARTVTLGRTDGELTEVVAGLSADEVYVSKNSFIL
EEEECCCEEEEECCCEEEEECCCCCCEEEEEEECCCCHHHHHHHCCCCCEEEEECCCEEE
KAELGKGEVGDDD
EEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8829543 [H]