Click here to switch to the map view.

The map label for this gene is 117676088

Identifier: 117676088

GI number: 117676088

Start: 8181

End: 8582

Strand: Reverse

Name: 117676088

Synonym: Shewana3_4148

Alternate gene names: NA

Gene position: 8582-8181 (Counterclockwise)

Preceding gene: 117676090

Following gene: 117676087

Centisome position: 3.08

GC content: 42.29

Gene sequence:

>402_bases
ATGTTATTTTTCATTGCGCCGCCATCACAGGCCGCTCAAGTCTCATTCTCTGACGAACTAGAGCTGCTTAATGTGGACGG
ACATTCCAATAACAACATTGATAGTTCACTAGAGTTATCGCCAGGTTCACATGTATTGGTTGTGCGGTATAGAGATTTAT
TTGAGGGTGTAAATGCTGATGACCCATCCACGTGGGTAAAATCACAACCTCTTTTTCTACAACTAGTGATTGATTCAAAC
CAAATCACACTAGCTCCTCCGCAGTTAGATGATGTGAATGCCGCCAACTCATATTTAAAGCAACCATATCTAACAGTTAC
GCCAGATGTCGGCGCGAATAAAGAGCTAATACTACAGCCGATGACAAGTGTTATCGCTAACGTTCTGTCAGCCAAAGATT
AA

Upstream 100 bases:

>100_bases
CAAAATGCTTTGAACCAAGATGTTGTGTTATTTAAATTCTGGAGAAACAGTTATGTTCTCAAAAACTACTCTTGCAGCCA
TTGCTGCGTCATCTCTGTCG

Downstream 100 bases:

>100_bases
TTTTGAAAGAGTTATCGAGGCTCAGCGTTACATTGATATCACGTTTCGTCGTTTGAAATAGATATTAGCCAATTTTGCGC
TAACACCTGCGTTGTTGAAG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 133; Mature: 133

Protein sequence:

>133_residues
MLFFIAPPSQAAQVSFSDELELLNVDGHSNNNIDSSLELSPGSHVLVVRYRDLFEGVNADDPSTWVKSQPLFLQLVIDSN
QITLAPPQLDDVNAANSYLKQPYLTVTPDVGANKELILQPMTSVIANVLSAKD

Sequences:

>Translated_133_residues
MLFFIAPPSQAAQVSFSDELELLNVDGHSNNNIDSSLELSPGSHVLVVRYRDLFEGVNADDPSTWVKSQPLFLQLVIDSN
QITLAPPQLDDVNAANSYLKQPYLTVTPDVGANKELILQPMTSVIANVLSAKD
>Mature_133_residues
MLFFIAPPSQAAQVSFSDELELLNVDGHSNNNIDSSLELSPGSHVLVVRYRDLFEGVNADDPSTWVKSQPLFLQLVIDSN
QITLAPPQLDDVNAANSYLKQPYLTVTPDVGANKELILQPMTSVIANVLSAKD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14508; Mature: 14508

Theoretical pI: Translated: 3.99; Mature: 3.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLFFIAPPSQAAQVSFSDELELLNVDGHSNNNIDSSLELSPGSHVLVVRYRDLFEGVNAD
CEEEECCCCCCEEEECCCCEEEEEECCCCCCCCCCEEEECCCCEEEEEEEHHHHCCCCCC
DPSTWVKSQPLFLQLVIDSNQITLAPPQLDDVNAANSYLKQPYLTVTPDVGANKELILQP
CCCCEECCCCEEEEEEECCCEEEECCCCCCCCCHHHHHHHCCCEEECCCCCCCHHEEEHH
MTSVIANVLSAKD
HHHHHHHHHHCCC
>Mature Secondary Structure
MLFFIAPPSQAAQVSFSDELELLNVDGHSNNNIDSSLELSPGSHVLVVRYRDLFEGVNAD
CEEEECCCCCCEEEECCCCEEEEEECCCCCCCCCCEEEECCCCEEEEEEEHHHHCCCCCC
DPSTWVKSQPLFLQLVIDSNQITLAPPQLDDVNAANSYLKQPYLTVTPDVGANKELILQP
CCCCEECCCCEEEEEEECCCEEEECCCCCCCCCHHHHHHHCCCEEECCCCCCCHHEEEHH
MTSVIANVLSAKD
HHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA