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The map label for this gene is 117676087

Identifier: 117676087

GI number: 117676087

Start: 6556

End: 7779

Strand: Reverse

Name: 117676087

Synonym: Shewana3_4147

Alternate gene names: NA

Gene position: 7779-6556 (Counterclockwise)

Preceding gene: 117676088

Following gene: 117676086

Centisome position: 2.79

GC content: 39.38

Gene sequence:

>1224_bases
ATGAGTAATAAAAAACTATCCGTATTAGCGCTAGGTTTAATTTGCAGCACTTCAGCTTTTGCAAATGAAACAGCTTCCAG
CTTTGATAAGTGGTTCTCAGAAGGAAGTGTTCATGGTGCGATGAAATCATATTACTTTGCTCAAACATTTGATAAGGAGG
GCAGCCACGACAGCCAAATCTGGGCGAATGGTGGCAACATTGCTTTTAATACTGCTGAACTTAATGGGTTTGAACTCGGA
GGTGAGTTCCAAGGATCCTATATAAACAGCCGGAATGACCGAGATGGAAAAACAGCGGGCAATATGGACGCTGATGGCGC
CATTTTGTCTGAATCATACTTGAAGTACACCTTGGGGGATACAATCTTCAAAGGGGGAAGACAACATTTTTCATCTCCTT
TTGTCGCCGATTCTGATTCGAGGCTCATCAAGGAGTCGTTTGAAATGTATCAGATCCGCAATAAGAGTCTATTAAACACT
GAGATTTCAGCAGGATATGTAACTAAATATCAAACGCGAACAGACAAATCATATTACGCAGATAATGACTTTGTTGAGTT
TGAACAAAACGGAACAGGTCGTCCGGGGGAGTTTTATGATATTGGTGACAGCGGCATGTGGTTTGCGCAGGTTAATACAT
CGCCATCAAAAAAAATTAAAATTCAGGCCTCATATGCTGATGTCATTGGTGAGGTGAAAGCATTATACGCTGATGTGAAA
TACACGTTACCCATCCCGTTAAAAAGCTATATTGCGGCACAGTTCTATACTAATTCTTGGGATAACCCTGACTTCGCCAA
TAATAACTTATTTGGTATTAAATTTGGCGCAAATCATAACAACTTTGAATTTTTTGCTGCATATACAACAGTGAGTGGTT
CAGAAGGAGAGCATCGTGTCTTTAGAGGCATTGGACAAGGTGCGTATTATCAATTTACCACAACCACAAAAACAGCTGGT
GTTAACGCCTTCGAGGCTGGAACTGACTCATATCAGCTCGGTGTTGGATATAAATACAATCAATTGGATGGGAAATTAAG
ATTCACTTCGTTTAATAACCCAGAAGTAGGTAAAGACCTTGATGAATGGACATTAAACTTGGTTTATGGTTTTTCCGGTG
ATTTTAAAAACTGCCTTGTTTCAGTTGACTTTTCAGTGTTGGACTATGAGAACAATGATAATGATGCTACCGATTTAAGG
GCTAAGTTTATTTATAAGTTTTAA

Upstream 100 bases:

>100_bases
CAGTAGATATGAGGTGAATATGACTGCACTGGCTAGATGCATTTGGTGTGGGACCAAGCTAGGCCATTGTAAAGTGACTA
AAATCGTAGAAGGGTAAATG

Downstream 100 bases:

>100_bases
TCTTTAATTATTCAACCAACTCATTTTTGAGTTGGTTGAATTTCATAATTTTTGAATTTTATCATTGTTATAAAAACAGA
AATAAACACCATTGAGGGAA

Product: outer membrane porin

Products: NA

Alternate protein names: Outer Membrane Porin OprD Family; Metalloid Reductase RarA; Porin D

Number of amino acids: Translated: 407; Mature: 406

Protein sequence:

>407_residues
MSNKKLSVLALGLICSTSAFANETASSFDKWFSEGSVHGAMKSYYFAQTFDKEGSHDSQIWANGGNIAFNTAELNGFELG
GEFQGSYINSRNDRDGKTAGNMDADGAILSESYLKYTLGDTIFKGGRQHFSSPFVADSDSRLIKESFEMYQIRNKSLLNT
EISAGYVTKYQTRTDKSYYADNDFVEFEQNGTGRPGEFYDIGDSGMWFAQVNTSPSKKIKIQASYADVIGEVKALYADVK
YTLPIPLKSYIAAQFYTNSWDNPDFANNNLFGIKFGANHNNFEFFAAYTTVSGSEGEHRVFRGIGQGAYYQFTTTTKTAG
VNAFEAGTDSYQLGVGYKYNQLDGKLRFTSFNNPEVGKDLDEWTLNLVYGFSGDFKNCLVSVDFSVLDYENNDNDATDLR
AKFIYKF

Sequences:

>Translated_407_residues
MSNKKLSVLALGLICSTSAFANETASSFDKWFSEGSVHGAMKSYYFAQTFDKEGSHDSQIWANGGNIAFNTAELNGFELG
GEFQGSYINSRNDRDGKTAGNMDADGAILSESYLKYTLGDTIFKGGRQHFSSPFVADSDSRLIKESFEMYQIRNKSLLNT
EISAGYVTKYQTRTDKSYYADNDFVEFEQNGTGRPGEFYDIGDSGMWFAQVNTSPSKKIKIQASYADVIGEVKALYADVK
YTLPIPLKSYIAAQFYTNSWDNPDFANNNLFGIKFGANHNNFEFFAAYTTVSGSEGEHRVFRGIGQGAYYQFTTTTKTAG
VNAFEAGTDSYQLGVGYKYNQLDGKLRFTSFNNPEVGKDLDEWTLNLVYGFSGDFKNCLVSVDFSVLDYENNDNDATDLR
AKFIYKF
>Mature_406_residues
SNKKLSVLALGLICSTSAFANETASSFDKWFSEGSVHGAMKSYYFAQTFDKEGSHDSQIWANGGNIAFNTAELNGFELGG
EFQGSYINSRNDRDGKTAGNMDADGAILSESYLKYTLGDTIFKGGRQHFSSPFVADSDSRLIKESFEMYQIRNKSLLNTE
ISAGYVTKYQTRTDKSYYADNDFVEFEQNGTGRPGEFYDIGDSGMWFAQVNTSPSKKIKIQASYADVIGEVKALYADVKY
TLPIPLKSYIAAQFYTNSWDNPDFANNNLFGIKFGANHNNFEFFAAYTTVSGSEGEHRVFRGIGQGAYYQFTTTTKTAGV
NAFEAGTDSYQLGVGYKYNQLDGKLRFTSFNNPEVGKDLDEWTLNLVYGFSGDFKNCLVSVDFSVLDYENNDNDATDLRA
KFIYKF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 45400; Mature: 45269

Theoretical pI: Translated: 4.71; Mature: 4.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNKKLSVLALGLICSTSAFANETASSFDKWFSEGSVHGAMKSYYFAQTFDKEGSHDSQI
CCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCEE
WANGGNIAFNTAELNGFELGGEFQGSYINSRNDRDGKTAGNMDADGAILSESYLKYTLGD
EECCCCEEEEEEECCCEEECCEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
TIFKGGRQHFSSPFVADSDSRLIKESFEMYQIRNKSLLNTEISAGYVTKYQTRTDKSYYA
HHHHCCHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCEECCCCCCCEEEEEECCCCCCEEC
DNDFVEFEQNGTGRPGEFYDIGDSGMWFAQVNTSPSKKIKIQASYADVIGEVKALYADVK
CCCEEEEECCCCCCCCCEEECCCCCEEEEEECCCCCCEEEEEEHHHHHHHHHHHHHCCEE
YTLPIPLKSYIAAQFYTNSWDNPDFANNNLFGIKFGANHNNFEFFAAYTTVSGSEGEHRV
EEECCCHHHHHEEHEECCCCCCCCCCCCCEEEEEECCCCCCEEEEEEEEEECCCCCCHHH
FRGIGQGAYYQFTTTTKTAGVNAFEAGTDSYQLGVGYKYNQLDGKLRFTSFNNPEVGKDL
HHHCCCCEEEEEEECCCCCCCCEEECCCCCEEECCCEEEECCCCEEEEEECCCCCCCCCC
DEWTLNLVYGFSGDFKNCLVSVDFSVLDYENNDNDATDLRAKFIYKF
CCEEEEEEEECCCCCCCEEEEEEEEEEEECCCCCCHHHHEEEEEECC
>Mature Secondary Structure 
SNKKLSVLALGLICSTSAFANETASSFDKWFSEGSVHGAMKSYYFAQTFDKEGSHDSQI
CCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCEE
WANGGNIAFNTAELNGFELGGEFQGSYINSRNDRDGKTAGNMDADGAILSESYLKYTLGD
EECCCCEEEEEEECCCEEECCEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
TIFKGGRQHFSSPFVADSDSRLIKESFEMYQIRNKSLLNTEISAGYVTKYQTRTDKSYYA
HHHHCCHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCEECCCCCCCEEEEEECCCCCCEEC
DNDFVEFEQNGTGRPGEFYDIGDSGMWFAQVNTSPSKKIKIQASYADVIGEVKALYADVK
CCCEEEEECCCCCCCCCEEECCCCCEEEEEECCCCCCEEEEEEHHHHHHHHHHHHHCCEE
YTLPIPLKSYIAAQFYTNSWDNPDFANNNLFGIKFGANHNNFEFFAAYTTVSGSEGEHRV
EEECCCHHHHHEEHEECCCCCCCCCCCCCEEEEEECCCCCCEEEEEEEEEECCCCCCHHH
FRGIGQGAYYQFTTTTKTAGVNAFEAGTDSYQLGVGYKYNQLDGKLRFTSFNNPEVGKDL
HHHCCCCEEEEEEECCCCCCCCEEECCCCCEEECCCEEEECCCCEEEEEECCCCCCCCCC
DEWTLNLVYGFSGDFKNCLVSVDFSVLDYENNDNDATDLRAKFIYKF
CCEEEEEEEECCCCCCCEEEEEEEEEEEECCCCCCHHHHEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA