Definition Borrelia afzelii PKo plasmid lp60, complete sequence.
Accession NC_008564
Length 59,958

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The map label for this gene is 117621625

Identifier: 117621625

GI number: 117621625

Start: 40319

End: 40882

Strand: Direct

Name: 117621625

Synonym: BAPKO_2054

Alternate gene names: NA

Gene position: 40319-40882 (Clockwise)

Preceding gene: 117621624

Following gene: 117621630

Centisome position: 67.25

GC content: 29.08

Gene sequence:

>564_bases
ATGGAAAATAATGTTTATGGGTTGGGTAGTTTAAAAGGTTCTTCTGTTGGCGCGTTAAAGCAGTATTTTTTTGAGAATGT
GTTTATTTGCAGAGTAGGTATTATTAAAAGTTTTGATTTTAAAACCCAAACAGGGATTGTTACTATTAAAGAGTATGAGG
GGTTAGAGATTAGTACTAGAAATATATCTAATTTTAATCTTGATTTAGCAGAAGAAGATGAAGTGGTTTTGCTTCAAAGT
AATTTTAATATTTTCCAAGAAAGCGATAATAATCATTTTGACAAAAATTATTATTATATTTTAAGTGTTCTTAATCCCAA
GAAAATTGGTATTAAGCTTAATGAGCTTAAAGTGAGCCTAGAAGAGTTTGATACACAAAGCGAAAATATAAAATTTAAAG
GGAAAAAATTGATTATTGATGTAGATAGTATTGAAATTAAAGGTAATTTAAAGATTAATGGAACTAATTTCGAGAATCAT
ATGCACAGTTCTGGTACTTTAACGTATGTTAATAGCAGTGGTGCGCCAACAGTTACAACTGGAAAAACAGGTCCTCTTGT
TTGA

Upstream 100 bases:

>100_bases
ATTTATTGTAAGGTTAAAAATACTAGTGCTAGACTAAGTAGCACTAGGGAGTGTGTTTTAAATCTTGAGCTTTACTGTGA
AGATAAAAAAGGAATGTATT

Downstream 100 bases:

>100_bases
ATAAGTACGCAAAATCACTAATTCACAACTTAAGATTTAAGTATAAGCTTGTTAACAAGGTTTTTAGTGGGCATTTTCTA
CTAATGAGATTAAATTTCTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 187; Mature: 187

Protein sequence:

>187_residues
MENNVYGLGSLKGSSVGALKQYFFENVFICRVGIIKSFDFKTQTGIVTIKEYEGLEISTRNISNFNLDLAEEDEVVLLQS
NFNIFQESDNNHFDKNYYYILSVLNPKKIGIKLNELKVSLEEFDTQSENIKFKGKKLIIDVDSIEIKGNLKINGTNFENH
MHSSGTLTYVNSSGAPTVTTGKTGPLV

Sequences:

>Translated_187_residues
MENNVYGLGSLKGSSVGALKQYFFENVFICRVGIIKSFDFKTQTGIVTIKEYEGLEISTRNISNFNLDLAEEDEVVLLQS
NFNIFQESDNNHFDKNYYYILSVLNPKKIGIKLNELKVSLEEFDTQSENIKFKGKKLIIDVDSIEIKGNLKINGTNFENH
MHSSGTLTYVNSSGAPTVTTGKTGPLV
>Mature_187_residues
MENNVYGLGSLKGSSVGALKQYFFENVFICRVGIIKSFDFKTQTGIVTIKEYEGLEISTRNISNFNLDLAEEDEVVLLQS
NFNIFQESDNNHFDKNYYYILSVLNPKKIGIKLNELKVSLEEFDTQSENIKFKGKKLIIDVDSIEIKGNLKINGTNFENH
MHSSGTLTYVNSSGAPTVTTGKTGPLV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20964; Mature: 20964

Theoretical pI: Translated: 5.31; Mature: 5.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MENNVYGLGSLKGSSVGALKQYFFENVFICRVGIIKSFDFKTQTGIVTIKEYEGLEISTR
CCCCEEEEECCCCCCHHHHHHHHHCCEEEEEEEEEEECCCCCCCCEEEEEECCCEEEEEC
NISNFNLDLAEEDEVVLLQSNFNIFQESDNNHFDKNYYYILSVLNPKKIGIKLNELKVSL
CCCEEEEEECCCCCEEEEECCCEEEECCCCCCCCCCEEEEEEECCCHHHCEEEHHEEEEH
EEFDTQSENIKFKGKKLIIDVDSIEIKGNLKINGTNFENHMHSSGTLTYVNSSGAPTVTT
HHCCCCCCCEEECCCEEEEEECCEEEEEEEEECCCCHHHCCCCCCEEEEEECCCCCEEEC
GKTGPLV
CCCCCCC
>Mature Secondary Structure
MENNVYGLGSLKGSSVGALKQYFFENVFICRVGIIKSFDFKTQTGIVTIKEYEGLEISTR
CCCCEEEEECCCCCCHHHHHHHHHCCEEEEEEEEEEECCCCCCCCEEEEEECCCEEEEEC
NISNFNLDLAEEDEVVLLQSNFNIFQESDNNHFDKNYYYILSVLNPKKIGIKLNELKVSL
CCCEEEEEECCCCCEEEEECCCEEEECCCCCCCCCCEEEEEEECCCHHHCEEEHHEEEEH
EEFDTQSENIKFKGKKLIIDVDSIEIKGNLKINGTNFENHMHSSGTLTYVNSSGAPTVTT
HHCCCCCCCEEECCCEEEEEECCEEEEEEEEECCCCHHHCCCCCCEEEEEECCCCCEEEC
GKTGPLV
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA