Definition Borrelia afzelii PKo plasmid lp60, complete sequence.
Accession NC_008564
Length 59,958

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The map label for this gene is 117621615

Identifier: 117621615

GI number: 117621615

Start: 33492

End: 34562

Strand: Direct

Name: 117621615

Synonym: BAPKO_2044

Alternate gene names: NA

Gene position: 33492-34562 (Clockwise)

Preceding gene: 117621614

Following gene: 117621616

Centisome position: 55.86

GC content: 30.44

Gene sequence:

>1071_bases
ATGCCAAAAGATACAATAAGCGTTAGTTTGGCGCAAAACAGACTGGTTACCAATAATATTAATTATTACAATCCGCTTTT
AATCTACAAAAGTAGTGTTTTAGCAAGTAAATATTTGGCATTAAGTGTTACAAATTTTGAAGATCTGCTTAAAAAACTTG
AGATACAAAAGGGTCAAGAGTCCGATTCTTCTAAGAAGAAAATAGCAGAGGAGCAGTTAATTGCTTTACAAAAAGCAATG
GGTGATTTTTTTGGACAAGACGGACTTAAGTCTGTTGATTTTTATGTTTACAATCAGATTAAAGAGATTAAAGATTTTTT
AAAATCCAATTTACATCCGTTTGTAGTTTTTGTAAATGAAGCAGAAGACAGTATTAGTGGTGATTTTGAAGCTATTAGAA
AAGCTTACAATTTTATTGTAATTTCCACTAAAGACAATACATTAGTGAATGTTTTAAAAGGTAAAGACAAAAGTGAGTTT
AAAAATATTATTGCTATTTACAGCGACAATGAAAATTTGCATCTTAAGTTTACAGCAATGTATTTGCATCAAGCAAGCAT
TTTCCATGCTGTTAATCCTTATGGGATGATTTTAAATTCTACTCCTATTTATGATGATTCTCTTATTGATTCTCTTAGAA
AATCCAATATTAATTTTTATTCTCTTCTAAATGAAACTGGCAATGATGGCGTTTTAGCTTTCAAAGAAGGAGTTAGTCTC
TCAGGAGATTCAATTGACGAGGCTTTTACGCTTTATTATATTAAGAATGAATCAATCAAAGAGCTTATTAGGATCTGGAA
TAAAAACAGTAGAGCTAACAGTAAGCTTAGTGCTTTAAATTTGGACGGCAGTTTACCAAATGAATACACAGCAGGGCTTG
AATGTTTTTTCCACGAACTCAAACAAAGAGGTCTTATTGTCTTTTACAAAGAGATTAAAGTTAAGATCAATTCTTCTCAA
GGTTTGAGTTTAAGCTTAGAAGTTGCGCTTAAGTATAATGACAGCTTTAATAGTGTTAATTTAATAATCACTGCACAAGA
GATAAATGAATATTTAAGGAGAGCATCATAA

Upstream 100 bases:

>100_bases
ATTTTTGTTGCAAACATACAGGTTTTAAAACAAGAGAGATAAATATTTAAAAAATAAAAAATTTAAAAAATAAAAAAATT
AAGTTAAAAAAGGAGGATAA

Downstream 100 bases:

>100_bases
TGAAAGAATATTATTCATTAGATTTAATATTTTTTAGCTTTAATGACAATTTAATAGACAGAGGTATTCTTGAGTACAGT
ACAGAGCCTAATATAATGGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 356; Mature: 355

Protein sequence:

>356_residues
MPKDTISVSLAQNRLVTNNINYYNPLLIYKSSVLASKYLALSVTNFEDLLKKLEIQKGQESDSSKKKIAEEQLIALQKAM
GDFFGQDGLKSVDFYVYNQIKEIKDFLKSNLHPFVVFVNEAEDSISGDFEAIRKAYNFIVISTKDNTLVNVLKGKDKSEF
KNIIAIYSDNENLHLKFTAMYLHQASIFHAVNPYGMILNSTPIYDDSLIDSLRKSNINFYSLLNETGNDGVLAFKEGVSL
SGDSIDEAFTLYYIKNESIKELIRIWNKNSRANSKLSALNLDGSLPNEYTAGLECFFHELKQRGLIVFYKEIKVKINSSQ
GLSLSLEVALKYNDSFNSVNLIITAQEINEYLRRAS

Sequences:

>Translated_356_residues
MPKDTISVSLAQNRLVTNNINYYNPLLIYKSSVLASKYLALSVTNFEDLLKKLEIQKGQESDSSKKKIAEEQLIALQKAM
GDFFGQDGLKSVDFYVYNQIKEIKDFLKSNLHPFVVFVNEAEDSISGDFEAIRKAYNFIVISTKDNTLVNVLKGKDKSEF
KNIIAIYSDNENLHLKFTAMYLHQASIFHAVNPYGMILNSTPIYDDSLIDSLRKSNINFYSLLNETGNDGVLAFKEGVSL
SGDSIDEAFTLYYIKNESIKELIRIWNKNSRANSKLSALNLDGSLPNEYTAGLECFFHELKQRGLIVFYKEIKVKINSSQ
GLSLSLEVALKYNDSFNSVNLIITAQEINEYLRRAS
>Mature_355_residues
PKDTISVSLAQNRLVTNNINYYNPLLIYKSSVLASKYLALSVTNFEDLLKKLEIQKGQESDSSKKKIAEEQLIALQKAMG
DFFGQDGLKSVDFYVYNQIKEIKDFLKSNLHPFVVFVNEAEDSISGDFEAIRKAYNFIVISTKDNTLVNVLKGKDKSEFK
NIIAIYSDNENLHLKFTAMYLHQASIFHAVNPYGMILNSTPIYDDSLIDSLRKSNINFYSLLNETGNDGVLAFKEGVSLS
GDSIDEAFTLYYIKNESIKELIRIWNKNSRANSKLSALNLDGSLPNEYTAGLECFFHELKQRGLIVFYKEIKVKINSSQG
LSLSLEVALKYNDSFNSVNLIITAQEINEYLRRAS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40344; Mature: 40213

Theoretical pI: Translated: 6.38; Mature: 6.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPKDTISVSLAQNRLVTNNINYYNPLLIYKSSVLASKYLALSVTNFEDLLKKLEIQKGQE
CCCCEEEEEEECCEEEECCCCCCCCEEEEEHHHHHHHEEEEEECCHHHHHHHHHHCCCCC
SDSSKKKIAEEQLIALQKAMGDFFGQDGLKSVDFYVYNQIKEIKDFLKSNLHPFVVFVNE
CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEEC
AEDSISGDFEAIRKAYNFIVISTKDNTLVNVLKGKDKSEFKNIIAIYSDNENLHLKFTAM
CCCCCCCCHHHHHHHCEEEEEEECCCCEEEEECCCCHHHHCCEEEEEECCCCEEEEEEEE
YLHQASIFHAVNPYGMILNSTPIYDDSLIDSLRKSNINFYSLLNETGNDGVLAFKEGVSL
EHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHCCCCEEEEECCCCCCCEEEEECCCCC
SGDSIDEAFTLYYIKNESIKELIRIWNKNSRANSKLSALNLDGSLPNEYTAGLECFFHEL
CCCCCCCEEEEEEEECHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHH
KQRGLIVFYKEIKVKINSSQGLSLSLEVALKYNDSFNSVNLIITAQEINEYLRRAS
HHCCEEEEEEEEEEEECCCCCCEEEEEEEEEECCCCCCEEEEEEHHHHHHHHHHCC
>Mature Secondary Structure 
PKDTISVSLAQNRLVTNNINYYNPLLIYKSSVLASKYLALSVTNFEDLLKKLEIQKGQE
CCCEEEEEEECCEEEECCCCCCCCEEEEEHHHHHHHEEEEEECCHHHHHHHHHHCCCCC
SDSSKKKIAEEQLIALQKAMGDFFGQDGLKSVDFYVYNQIKEIKDFLKSNLHPFVVFVNE
CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEEC
AEDSISGDFEAIRKAYNFIVISTKDNTLVNVLKGKDKSEFKNIIAIYSDNENLHLKFTAM
CCCCCCCCHHHHHHHCEEEEEEECCCCEEEEECCCCHHHHCCEEEEEECCCCEEEEEEEE
YLHQASIFHAVNPYGMILNSTPIYDDSLIDSLRKSNINFYSLLNETGNDGVLAFKEGVSL
EHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHCCCCEEEEECCCCCCCEEEEECCCCC
SGDSIDEAFTLYYIKNESIKELIRIWNKNSRANSKLSALNLDGSLPNEYTAGLECFFHEL
CCCCCCCEEEEEEEECHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHH
KQRGLIVFYKEIKVKINSSQGLSLSLEVALKYNDSFNSVNLIITAQEINEYLRRAS
HHCCEEEEEEEEEEEECCCCCCEEEEEEEEEECCCCCCEEEEEEHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA