Definition Borrelia afzelii PKo plasmid lp60, complete sequence.
Accession NC_008564
Length 59,958

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The map label for this gene is 117621609

Identifier: 117621609

GI number: 117621609

Start: 30158

End: 30769

Strand: Direct

Name: 117621609

Synonym: BAPKO_2038

Alternate gene names: NA

Gene position: 30158-30769 (Clockwise)

Preceding gene: 117621608

Following gene: 117621610

Centisome position: 50.3

GC content: 32.19

Gene sequence:

>612_bases
ATGAGTGATTCAGTTGATTTTAAAAAAGAGATAGAAAAACTAAAAGCATCAAAAGTAGAACTTGAGAGTCAGCTTGAAAG
TTTAAAAAAAAATCAAGCTCAAAAAATTGTTTTAGACAAATTACAAAGTGTTAATGCTAACAGTTGCCCTGTGTTTGAGA
GCAATTCTAAGTTTCAAGATGAGGGATTTTATTTTGCTCAAAAAGGCGGACTTAAGAGATCTTCTGCTGATAAGTTTGAA
AATTACCAAGCTCAAGATTTTTGCTACAAATGTGGGGTTAAGCTTATTGTTAATGGTTCACATTTGCAAATAGCAAGAGG
CGGCGGCAGTGATCTTTATGGGGTTTGTGTTGACTTTGATGATTTTTCAAGAACCGGGACAGTTGTTCCAATAACTTGTA
GTTTTGAATGTGTTTTGATTGCTAAAGATAAAACAATTAAAGCAGGAGATAAATTAATAATAAACAGCGAAGGGTTTTTA
GAAAAAGCTTTTGAGAATGCATCAATTATTCACGCTTTAGCATTAGGATCTGCTGAAGAATTTAAAGACAAAAGAGATGT
TTATGGTGTTAGAGTTCTTTTTTTGGTCAAGCAAATAAAAGATGCAATTTAA

Upstream 100 bases:

>100_bases
AGAGCTTAAGCGTGAATTTTATTGTAATAAAAAAGTATTAGCTTAAATTTTTGCAATTTAAGCTTTTAATAAAAAATTAA
TTTAAAAAAGGAGATTATTA

Downstream 100 bases:

>100_bases
AATAGGAGAATTTAAAATGGATGAGAGTATATTAAATAACGATGAGTATGTAAACGTAGTAAGGGATGTTTTAGTGCAGG
AGTGTCCAATTCCGGAATAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 203; Mature: 202

Protein sequence:

>203_residues
MSDSVDFKKEIEKLKASKVELESQLESLKKNQAQKIVLDKLQSVNANSCPVFESNSKFQDEGFYFAQKGGLKRSSADKFE
NYQAQDFCYKCGVKLIVNGSHLQIARGGGSDLYGVCVDFDDFSRTGTVVPITCSFECVLIAKDKTIKAGDKLIINSEGFL
EKAFENASIIHALALGSAEEFKDKRDVYGVRVLFLVKQIKDAI

Sequences:

>Translated_203_residues
MSDSVDFKKEIEKLKASKVELESQLESLKKNQAQKIVLDKLQSVNANSCPVFESNSKFQDEGFYFAQKGGLKRSSADKFE
NYQAQDFCYKCGVKLIVNGSHLQIARGGGSDLYGVCVDFDDFSRTGTVVPITCSFECVLIAKDKTIKAGDKLIINSEGFL
EKAFENASIIHALALGSAEEFKDKRDVYGVRVLFLVKQIKDAI
>Mature_202_residues
SDSVDFKKEIEKLKASKVELESQLESLKKNQAQKIVLDKLQSVNANSCPVFESNSKFQDEGFYFAQKGGLKRSSADKFEN
YQAQDFCYKCGVKLIVNGSHLQIARGGGSDLYGVCVDFDDFSRTGTVVPITCSFECVLIAKDKTIKAGDKLIINSEGFLE
KAFENASIIHALALGSAEEFKDKRDVYGVRVLFLVKQIKDAI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22516; Mature: 22385

Theoretical pI: Translated: 7.21; Mature: 7.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.0 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
3.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDSVDFKKEIEKLKASKVELESQLESLKKNQAQKIVLDKLQSVNANSCPVFESNSKFQD
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCCCCCC
EGFYFAQKGGLKRSSADKFENYQAQDFCYKCGVKLIVNGSHLQIARGGGSDLYGVCVDFD
CCEEEEECCCCCCCCHHHHHCCCHHHHHHHCCEEEEEECCEEEEEECCCCCEEEEEEECC
DFSRTGTVVPITCSFECVLIAKDKTIKAGDKLIINSEGFLEKAFENASIIHALALGSAEE
CCCCCCCEEEEEECEEEEEEECCCEECCCCEEEECCCHHHHHHHCCCHHHHHHHCCCHHH
FKDKRDVYGVRVLFLVKQIKDAI
HHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SDSVDFKKEIEKLKASKVELESQLESLKKNQAQKIVLDKLQSVNANSCPVFESNSKFQD
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCCCCCC
EGFYFAQKGGLKRSSADKFENYQAQDFCYKCGVKLIVNGSHLQIARGGGSDLYGVCVDFD
CCEEEEECCCCCCCCHHHHHCCCHHHHHHHCCEEEEEECCEEEEEECCCCCEEEEEEECC
DFSRTGTVVPITCSFECVLIAKDKTIKAGDKLIINSEGFLEKAFENASIIHALALGSAEE
CCCCCCCEEEEEECEEEEEEECCCEECCCCEEEECCCHHHHHHHCCCHHHHHHHCCCHHH
FKDKRDVYGVRVLFLVKQIKDAI
HHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA