Definition Borrelia afzelii PKo plasmid lp60, complete sequence.
Accession NC_008564
Length 59,958

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The map label for this gene is 117621599

Identifier: 117621599

GI number: 117621599

Start: 21235

End: 22587

Strand: Direct

Name: 117621599

Synonym: BAPKO_2028

Alternate gene names: NA

Gene position: 21235-22587 (Clockwise)

Preceding gene: 117621598

Following gene: 117621600

Centisome position: 35.42

GC content: 28.97

Gene sequence:

>1353_bases
TTGAAATTTTCAAGATCTTTAATCTTTCTCAATCTTCAGAAAAAGTTTAAAAATAAATTTAATATCAATATTTTGGATTA
TATTAAGCCAAGACCAATCAATATTGGTTTTAAAGATTTTGAAAACCAATATTTAACCACTAAGCAGAAAGAAGTGCTTT
TTGACATAGAAAGTCATACTTATTCAAAAGTAATATTTAGTGGCGGGATTGCAAGTGGTAAGACATTTTTAGCCTCATAT
TTGCTTATTAAAAAGCTTATTGAAAACAAATCTTTTTATGAGCAAGATACTAATAATTTTATTATAGGCAATTCTATTGG
TTTGTTAATGACAAATACTATAAAGCAAATAGAAAAGATTTGCGGGCTATTAGGAATTGATTATCAGAAAAAGAAAAGCG
GGCAATCTTTTTGTAAAATAGCAGGGCTTGAGCTTAATATTTATGGGGGTAAAAACAGAGATGCTTTTTCTAAGATTCGA
GGGGGCAATAGTGCAATAATTTATGTAAATGAAGCAACAGTAATCCACAAAGAAACTTTGCTTGAGGTAATGAAAAGGCT
TAGAAAGGGCAAATCAATTATTATTTTTGATACAAATCCCGAAAGCCCAGCACATTATTTTAAAACAGACTATATTGAAA
ATACAGATGTTTTTAAAACATATAATTTTACAACGTATGACAACCCTTTAAATTCAGCAGATTTTATTGAAACCCAGGAG
AAGCTTTACAAACATTTTCCTGCTTATAAGGCCCGAGTACTTTATGGAGAGTGGGTGTTAAATGAATCTTCATTGTTTAA
TGAAATGATTTTTAACCAAGATTATGAATTTAAAAGTCCAATAATGTACATTGATCCTGCATTCTCAGTAGGTGGGGACA
ATACAGCTGTTTGTGTTTTAGAACGCACTTTTGATAAGTTTTATGCATATATTTATCAAAGCCAAAAACCAATAAGTGAT
AGCTTAATGCTTAGCTCTATTCAAGTTTTAATAGAAAATTTCAATGTAAATACGGTTTATATTGAGGAGAGAGATAGTAC
CAAAGGGGATGGAATTTTGACCAAAACAATTCTTTTTCTAAGAAATAAGAGTTTTTGTTATTTTAGAGTTGCGCCAATAA
AACCCTTGAGCAATAAGTTTAAAAGAATATGTGCTTTAATTCCTTTGTTTGAAAGCTGCAAAATAGAATTTTTAAAAATA
GTAAGCAAAAATGTAATAGCTGATATTTACAGCTACAAAGGCGACGGCAAAACAAAAGATGATGCACTCGATTCTCTTGC
AAATGCTTATCTTCTTTTAACATTAAATTATAAAGAAAAATTATTACATTTTGGAAAGTTTAAATATTTATAA

Upstream 100 bases:

>100_bases
TGAAAAGGAGCTTATTAACATTTGCATGAGAGAAGATTATGATACCCTTGTTAAACTTAAATCTATTTTAAGTAGTAAGA
ATTTAAAATTGGAGTAAAAT

Downstream 100 bases:

>100_bases
TTTGATCTAAATTTTTAGTTATTAATTTAAGTTTGTAATTAACAACCATTTTAAAATTTTTTATTTTTCGTACTCTCTTT
GATTAAAATTGGCTTTGCCC

Product: hypothetical protein

Products: NA

Alternate protein names: PBSX Family Phage Terminase Large Subunit; Phage Terminase Large Subunit; Phage Terminase Large Subunit PBSX Family; Bsr Protein; Phage Terminase Large Subunit ATPase

Number of amino acids: Translated: 450; Mature: 450

Protein sequence:

>450_residues
MKFSRSLIFLNLQKKFKNKFNINILDYIKPRPINIGFKDFENQYLTTKQKEVLFDIESHTYSKVIFSGGIASGKTFLASY
LLIKKLIENKSFYEQDTNNFIIGNSIGLLMTNTIKQIEKICGLLGIDYQKKKSGQSFCKIAGLELNIYGGKNRDAFSKIR
GGNSAIIYVNEATVIHKETLLEVMKRLRKGKSIIIFDTNPESPAHYFKTDYIENTDVFKTYNFTTYDNPLNSADFIETQE
KLYKHFPAYKARVLYGEWVLNESSLFNEMIFNQDYEFKSPIMYIDPAFSVGGDNTAVCVLERTFDKFYAYIYQSQKPISD
SLMLSSIQVLIENFNVNTVYIEERDSTKGDGILTKTILFLRNKSFCYFRVAPIKPLSNKFKRICALIPLFESCKIEFLKI
VSKNVIADIYSYKGDGKTKDDALDSLANAYLLLTLNYKEKLLHFGKFKYL

Sequences:

>Translated_450_residues
MKFSRSLIFLNLQKKFKNKFNINILDYIKPRPINIGFKDFENQYLTTKQKEVLFDIESHTYSKVIFSGGIASGKTFLASY
LLIKKLIENKSFYEQDTNNFIIGNSIGLLMTNTIKQIEKICGLLGIDYQKKKSGQSFCKIAGLELNIYGGKNRDAFSKIR
GGNSAIIYVNEATVIHKETLLEVMKRLRKGKSIIIFDTNPESPAHYFKTDYIENTDVFKTYNFTTYDNPLNSADFIETQE
KLYKHFPAYKARVLYGEWVLNESSLFNEMIFNQDYEFKSPIMYIDPAFSVGGDNTAVCVLERTFDKFYAYIYQSQKPISD
SLMLSSIQVLIENFNVNTVYIEERDSTKGDGILTKTILFLRNKSFCYFRVAPIKPLSNKFKRICALIPLFESCKIEFLKI
VSKNVIADIYSYKGDGKTKDDALDSLANAYLLLTLNYKEKLLHFGKFKYL
>Mature_450_residues
MKFSRSLIFLNLQKKFKNKFNINILDYIKPRPINIGFKDFENQYLTTKQKEVLFDIESHTYSKVIFSGGIASGKTFLASY
LLIKKLIENKSFYEQDTNNFIIGNSIGLLMTNTIKQIEKICGLLGIDYQKKKSGQSFCKIAGLELNIYGGKNRDAFSKIR
GGNSAIIYVNEATVIHKETLLEVMKRLRKGKSIIIFDTNPESPAHYFKTDYIENTDVFKTYNFTTYDNPLNSADFIETQE
KLYKHFPAYKARVLYGEWVLNESSLFNEMIFNQDYEFKSPIMYIDPAFSVGGDNTAVCVLERTFDKFYAYIYQSQKPISD
SLMLSSIQVLIENFNVNTVYIEERDSTKGDGILTKTILFLRNKSFCYFRVAPIKPLSNKFKRICALIPLFESCKIEFLKI
VSKNVIADIYSYKGDGKTKDDALDSLANAYLLLTLNYKEKLLHFGKFKYL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 51964; Mature: 51964

Theoretical pI: Translated: 9.49; Mature: 9.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKFSRSLIFLNLQKKFKNKFNINILDYIKPRPINIGFKDFENQYLTTKQKEVLFDIESHT
CCCCCEEEEEEEHHHHCCCCCCEEEECCCCCCCCCCHHHHCCCCCCCCCCEEEEEECCCC
YSKVIFSGGIASGKTFLASYLLIKKLIENKSFYEQDTNNFIIGNSIGLLMTNTIKQIEKI
EEEEEEECCCCCCHHHHHHHHHHHHHHCCCCHHCCCCCCEEEECCCHHHHHHHHHHHHHH
CGLLGIDYQKKKSGQSFCKIAGLELNIYGGKNRDAFSKIRGGNSAIIYVNEATVIHKETL
HHHHCCCCHHHCCCCCEEEEECEEEEEECCCCCHHHHHHCCCCEEEEEEECCEEEHHHHH
LEVMKRLRKGKSIIIFDTNPESPAHYFKTDYIENTDVFKTYNFTTYDNPLNSADFIETQE
HHHHHHHHCCCEEEEEECCCCCCCHHHHHCCCCCCCEEEEEEEEECCCCCCCHHHHHHHH
KLYKHFPAYKARVLYGEWVLNESSLFNEMIFNQDYEFKSPIMYIDPAFSVGGDNTAVCVL
HHHHHCCCCEEEEEEEEEEECHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCEEEEEE
ERTFDKFYAYIYQSQKPISDSLMLSSIQVLIENFNVNTVYIEERDSTKGDGILTKTILFL
EHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHH
RNKSFCYFRVAPIKPLSNKFKRICALIPLFESCKIEFLKIVSKNVIADIYSYKGDGKTKD
CCCCEEEEEEECCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHH
DALDSLANAYLLLTLNYKEKLLHFGKFKYL
HHHHHHCCEEEEEEECHHHHHHHHHCCCCC
>Mature Secondary Structure
MKFSRSLIFLNLQKKFKNKFNINILDYIKPRPINIGFKDFENQYLTTKQKEVLFDIESHT
CCCCCEEEEEEEHHHHCCCCCCEEEECCCCCCCCCCHHHHCCCCCCCCCCEEEEEECCCC
YSKVIFSGGIASGKTFLASYLLIKKLIENKSFYEQDTNNFIIGNSIGLLMTNTIKQIEKI
EEEEEEECCCCCCHHHHHHHHHHHHHHCCCCHHCCCCCCEEEECCCHHHHHHHHHHHHHH
CGLLGIDYQKKKSGQSFCKIAGLELNIYGGKNRDAFSKIRGGNSAIIYVNEATVIHKETL
HHHHCCCCHHHCCCCCEEEEECEEEEEECCCCCHHHHHHCCCCEEEEEEECCEEEHHHHH
LEVMKRLRKGKSIIIFDTNPESPAHYFKTDYIENTDVFKTYNFTTYDNPLNSADFIETQE
HHHHHHHHCCCEEEEEECCCCCCCHHHHHCCCCCCCEEEEEEEEECCCCCCCHHHHHHHH
KLYKHFPAYKARVLYGEWVLNESSLFNEMIFNQDYEFKSPIMYIDPAFSVGGDNTAVCVL
HHHHHCCCCEEEEEEEEEEECHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCEEEEEE
ERTFDKFYAYIYQSQKPISDSLMLSSIQVLIENFNVNTVYIEERDSTKGDGILTKTILFL
EHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHH
RNKSFCYFRVAPIKPLSNKFKRICALIPLFESCKIEFLKIVSKNVIADIYSYKGDGKTKD
CCCCEEEEEEECCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHH
DALDSLANAYLLLTLNYKEKLLHFGKFKYL
HHHHHHCCEEEEEEECHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA