| Definition | Borrelia afzelii PKo plasmid lp60, complete sequence. |
|---|---|
| Accession | NC_008564 |
| Length | 59,958 |
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The map label for this gene is 117621598
Identifier: 117621598
GI number: 117621598
Start: 20638
End: 21231
Strand: Direct
Name: 117621598
Synonym: BAPKO_2027
Alternate gene names: NA
Gene position: 20638-21231 (Clockwise)
Preceding gene: 117621594
Following gene: 117621599
Centisome position: 34.42
GC content: 26.77
Gene sequence:
>594_bases ATGATATTTAAAAATAGAAAAGAAGAATATATTTTTTTATTTAAAAAAGGTTTAAAAGATTTAGATATTGCTCAAATTCT GGGTGTTGGCGAATCTTTTGTAACAAAAGCACGAAACAAATATTTTAAATCCAATGATTCTGTTTGTAAAAAGAACTTTT TTTCTAGTGATTCAACAATAGAGAATGTTTCTAAAGCATCCTTTAATCAGGACGATTTTGACAATTTGGCGCTATTTGCT ATAAAAAAGTCCTTTGAGTTAGAAAATGCTAAAAATGAGACTGAAAGATTATTTTATGAGATAGTTTGTTCTTTTATTGA TTCCCATCACAGATATAAAAATCTCAGTTTAAAATCAATAAAAAAAGAGGCATTAATTTTAGACTTAAAAATTAGTAAGC TTCAAAGTGAGATTGAAAGCAATAAAAAAAGAGGCTTTAAAGGTGATGAAGGGCTTGAAATAGAGCTTACTTCCAAGATT AAAAAGAGAGAAGAGCTTGAAAAGGAGCTTATTAACATTTGCATGAGAGAAGATTATGATACCCTTGTTAAACTTAAATC TATTTTAAGTAGTAAGAATTTAAAATTGGAGTAA
Upstream 100 bases:
>100_bases TTTTGTTCTATTTAAAAATATAGATCTTTAAATTAAATATTCACAATAAAAACATTTAATTTTTCTTGAGTTTTTAAAAA AACTTAATTAAAATAAAATA
Downstream 100 bases:
>100_bases AATTTGAAATTTTCAAGATCTTTAATCTTTCTCAATCTTCAGAAAAAGTTTAAAAATAAATTTAATATCAATATTTTGGA TTATATTAAGCCAAGACCAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 197; Mature: 197
Protein sequence:
>197_residues MIFKNRKEEYIFLFKKGLKDLDIAQILGVGESFVTKARNKYFKSNDSVCKKNFFSSDSTIENVSKASFNQDDFDNLALFA IKKSFELENAKNETERLFYEIVCSFIDSHHRYKNLSLKSIKKEALILDLKISKLQSEIESNKKRGFKGDEGLEIELTSKI KKREELEKELINICMREDYDTLVKLKSILSSKNLKLE
Sequences:
>Translated_197_residues MIFKNRKEEYIFLFKKGLKDLDIAQILGVGESFVTKARNKYFKSNDSVCKKNFFSSDSTIENVSKASFNQDDFDNLALFA IKKSFELENAKNETERLFYEIVCSFIDSHHRYKNLSLKSIKKEALILDLKISKLQSEIESNKKRGFKGDEGLEIELTSKI KKREELEKELINICMREDYDTLVKLKSILSSKNLKLE >Mature_197_residues MIFKNRKEEYIFLFKKGLKDLDIAQILGVGESFVTKARNKYFKSNDSVCKKNFFSSDSTIENVSKASFNQDDFDNLALFA IKKSFELENAKNETERLFYEIVCSFIDSHHRYKNLSLKSIKKEALILDLKISKLQSEIESNKKRGFKGDEGLEIELTSKI KKREELEKELINICMREDYDTLVKLKSILSSKNLKLE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22976; Mature: 22976
Theoretical pI: Translated: 9.29; Mature: 9.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIFKNRKEEYIFLFKKGLKDLDIAQILGVGESFVTKARNKYFKSNDSVCKKNFFSSDSTI CCCCCCCHHHHHHHHHCCCCCHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHCCCCCCHH ENVSKASFNQDDFDNLALFAIKKSFELENAKNETERLFYEIVCSFIDSHHRYKNLSLKSI HHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHH KKEALILDLKISKLQSEIESNKKRGFKGDEGLEIELTSKIKKREELEKELINICMREDYD HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHCCHH TLVKLKSILSSKNLKLE HHHHHHHHHCCCCCCCC >Mature Secondary Structure MIFKNRKEEYIFLFKKGLKDLDIAQILGVGESFVTKARNKYFKSNDSVCKKNFFSSDSTI CCCCCCCHHHHHHHHHCCCCCHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHCCCCCCHH ENVSKASFNQDDFDNLALFAIKKSFELENAKNETERLFYEIVCSFIDSHHRYKNLSLKSI HHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHH KKEALILDLKISKLQSEIESNKKRGFKGDEGLEIELTSKIKKREELEKELINICMREDYD HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHCCHH TLVKLKSILSSKNLKLE HHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA