Definition Borrelia afzelii PKo plasmid lp60, complete sequence.
Accession NC_008564
Length 59,958

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The map label for this gene is 117621582

Identifier: 117621582

GI number: 117621582

Start: 8995

End: 9621

Strand: Direct

Name: 117621582

Synonym: BAPKO_2011

Alternate gene names: NA

Gene position: 8995-9621 (Clockwise)

Preceding gene: 117621581

Following gene: 117621583

Centisome position: 15.0

GC content: 25.52

Gene sequence:

>627_bases
ATGAACAAAGAGATACCAAAATTTTTAGAAAATACTCAAATTGAAAAGTTTATCTACAATGAGCTTAATTACAAAAAAGA
GATATTAAAAGAACTAAAAGAACTGCTTGAAAACTTCAAAACAATCAATGTTAAAAACAGTATTAACTCTAAATATATTA
CATTACTAATGCTTTCAATATTTAACGCATTCCACTTTAAAAAAGAGTTAGATAAAAATCTTGTCAATTCTTTAAACGCC
ATTATTTTTGCAATCAAATCTATTGGTACTGACGAGAGCTTTATTGTGCTCTTTAAAGCCTTTTTACATGCAAATATTGA
AGTCAGCTCAAACCAAGACGCTCCAGGAGAAATAATAATCAAATTACTTGGAAACATTAAATCCCCGATTGAATTTAATA
TTGCAGCAAAAAATCAAAATAAACTAAAAAAAATAACTATAAAACACGCTGGATTTAAAAAAGCTCTAATTTCTCACCAT
ATGCCCAAAGATTACAAAAATTCAGTATATGAGTTTATTAAAATATTAATTCCTATAGGAAGAATAGTAAAAATCATAGA
CAAAGAACAAATAGAAATAAAAAGTACAAGAACAAAACAATTTTACAAAGTAGATCATTTTTTTTGA

Upstream 100 bases:

>100_bases
GTGAGAGTGATTTTACATTCAATAAAGACGAAAACATTAAAGAGAATGAAATTATCATTTTTGATACAAACAAAAGACTG
CTTATTAACAGAGAATAAAA

Downstream 100 bases:

>100_bases
TCCACCAAAGTATAAATAATAATTTAAAACTAAAAGAAATTTAAAAGGAGAATTTATGAATACCAACGAACCACAAGAGA
GTGTACAAATAAAAGATTTA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 208; Mature: 208

Protein sequence:

>208_residues
MNKEIPKFLENTQIEKFIYNELNYKKEILKELKELLENFKTINVKNSINSKYITLLMLSIFNAFHFKKELDKNLVNSLNA
IIFAIKSIGTDESFIVLFKAFLHANIEVSSNQDAPGEIIIKLLGNIKSPIEFNIAAKNQNKLKKITIKHAGFKKALISHH
MPKDYKNSVYEFIKILIPIGRIVKIIDKEQIEIKSTRTKQFYKVDHFF

Sequences:

>Translated_208_residues
MNKEIPKFLENTQIEKFIYNELNYKKEILKELKELLENFKTINVKNSINSKYITLLMLSIFNAFHFKKELDKNLVNSLNA
IIFAIKSIGTDESFIVLFKAFLHANIEVSSNQDAPGEIIIKLLGNIKSPIEFNIAAKNQNKLKKITIKHAGFKKALISHH
MPKDYKNSVYEFIKILIPIGRIVKIIDKEQIEIKSTRTKQFYKVDHFF
>Mature_208_residues
MNKEIPKFLENTQIEKFIYNELNYKKEILKELKELLENFKTINVKNSINSKYITLLMLSIFNAFHFKKELDKNLVNSLNA
IIFAIKSIGTDESFIVLFKAFLHANIEVSSNQDAPGEIIIKLLGNIKSPIEFNIAAKNQNKLKKITIKHAGFKKALISHH
MPKDYKNSVYEFIKILIPIGRIVKIIDKEQIEIKSTRTKQFYKVDHFF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24247; Mature: 24247

Theoretical pI: Translated: 10.28; Mature: 10.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKEIPKFLENTQIEKFIYNELNYKKEILKELKELLENFKTINVKNSINSKYITLLMLSI
CCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHH
FNAFHFKKELDKNLVNSLNAIIFAIKSIGTDESFIVLFKAFLHANIEVSSNQDAPGEIII
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCEECCCCCCHHHHHH
KLLGNIKSPIEFNIAAKNQNKLKKITIKHAGFKKALISHHMPKDYKNSVYEFIKILIPIG
HHHHCCCCCEEEEEEECCCCHHHEEEEHHCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
RIVKIIDKEQIEIKSTRTKQFYKVDHFF
HHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MNKEIPKFLENTQIEKFIYNELNYKKEILKELKELLENFKTINVKNSINSKYITLLMLSI
CCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHH
FNAFHFKKELDKNLVNSLNAIIFAIKSIGTDESFIVLFKAFLHANIEVSSNQDAPGEIII
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCEECCCCCCHHHHHH
KLLGNIKSPIEFNIAAKNQNKLKKITIKHAGFKKALISHHMPKDYKNSVYEFIKILIPIG
HHHHCCCCCEEEEEEECCCCHHHEEEEHHCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
RIVKIIDKEQIEIKSTRTKQFYKVDHFF
HHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA