| Definition | Listeria welshimeri serovar 6b str. SLCC5334, complete genome. |
|---|---|
| Accession | NC_008555 |
| Length | 2,814,130 |
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The map label for this gene is yeiH [C]
Identifier: 116873580
GI number: 116873580
Start: 2200033
End: 2201040
Strand: Direct
Name: yeiH [C]
Synonym: lwe2164
Alternate gene names: 116873580
Gene position: 2200033-2201040 (Clockwise)
Preceding gene: 116873576
Following gene: 116873581
Centisome position: 78.18
GC content: 37.7
Gene sequence:
>1008_bases ATGAATCAAATTTTATTTAAAACGAAAACTTTTTGGTATGGTATTGCGCTTACTTTCTGTATCGCTACCCTATCTTATTT TTTGGCAAAATTACCCTTTTTAATGATTCTTGGGCAACTTGTTACTGCAATTTTAATCGGAATTATTATTCGTGCTCTTT TTCCAGTCCCTGATAAATGGTTCACAGGTATTCAGTTTTCCAATAAAGTAATTCTTCGTGCTGGGATTATATTACTTGGT TTTCGCTTAAACTTAGTCGATATTTATCATGCGGGATGGCGCGTATTTCTAATCGCTGCGTTATGTCTTAGTTTTGGGAT TGCCGTTGTTTACTTTTTAGCAAAACTTTTTGGAGTGGATAAAAAACTAGCTATCCTTGTTGCATGTGGTACGGGAATTT GCGGGGCAGCAGCTGTGGTTGCTATTTCTCCACAAGTCAAAGCGAATAATAATCAAACAGCAGTAGCCGCAACCATTATC GCACTTCTAGGAACTATTTTTACAGTGGTTTACACTTTAATTTATCCAATTCTACCACTCGGACCAAATGGATATGGTAT TTTTTCAGGAGCTACACTTCATGAAATTGCGCATGTTATTGCTGCAGCAGATCCAGGTGGAACAGCTGCTGTAGATATGG CGGTTATTGTTAAACTAACACGCGTCGCATTACTGGTTCCTGTATGCTTCGTTGTTGCAAAAATGGTAAACGTTGGGACT AAAAATCGCTTTTCTTGGGCAGAACTTCCCGTACCATGGTTCATTTTCGGTTTTCTAGCTACAAGTGCAATTAATAGTTT TGGAATTATTCCTACATCAATTACTGATTTTCTAGTTATCTGTGCTTATTTTCTTATCGCTATGTCAATGGGCGGTCTTG GATTAAATGTCCACTTACCTTCTTTTGGAAAAATGGGTGGAAAGCCTTTTGCAGCAGCGTTTATTGGTTCTATATTGCTC TCTCTATTTGGCCTAGCGTTAGTACTTTTGTTTCATTTAGCAGGTTAA
Upstream 100 bases:
>100_bases CCCCTCCATAAATAAAACTTATTAATAATATAATTAATATAAATTTTACTAATAAAATAAGAAATGGTAAAGTAAAAGCA TAAAAGAAAGGAGAATGGAT
Downstream 100 bases:
>100_bases GTTTTCCTCGTCGTCTCGATTTGTGATACAATAACAAGCACGAGGTGACTATTTCATGACGAAAGCAATTTGGACTTGCC GAGTGTTCTTACTCGGATAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 335; Mature: 335
Protein sequence:
>335_residues MNQILFKTKTFWYGIALTFCIATLSYFLAKLPFLMILGQLVTAILIGIIIRALFPVPDKWFTGIQFSNKVILRAGIILLG FRLNLVDIYHAGWRVFLIAALCLSFGIAVVYFLAKLFGVDKKLAILVACGTGICGAAAVVAISPQVKANNNQTAVAATII ALLGTIFTVVYTLIYPILPLGPNGYGIFSGATLHEIAHVIAAADPGGTAAVDMAVIVKLTRVALLVPVCFVVAKMVNVGT KNRFSWAELPVPWFIFGFLATSAINSFGIIPTSITDFLVICAYFLIAMSMGGLGLNVHLPSFGKMGGKPFAAAFIGSILL SLFGLALVLLFHLAG
Sequences:
>Translated_335_residues MNQILFKTKTFWYGIALTFCIATLSYFLAKLPFLMILGQLVTAILIGIIIRALFPVPDKWFTGIQFSNKVILRAGIILLG FRLNLVDIYHAGWRVFLIAALCLSFGIAVVYFLAKLFGVDKKLAILVACGTGICGAAAVVAISPQVKANNNQTAVAATII ALLGTIFTVVYTLIYPILPLGPNGYGIFSGATLHEIAHVIAAADPGGTAAVDMAVIVKLTRVALLVPVCFVVAKMVNVGT KNRFSWAELPVPWFIFGFLATSAINSFGIIPTSITDFLVICAYFLIAMSMGGLGLNVHLPSFGKMGGKPFAAAFIGSILL SLFGLALVLLFHLAG >Mature_335_residues MNQILFKTKTFWYGIALTFCIATLSYFLAKLPFLMILGQLVTAILIGIIIRALFPVPDKWFTGIQFSNKVILRAGIILLG FRLNLVDIYHAGWRVFLIAALCLSFGIAVVYFLAKLFGVDKKLAILVACGTGICGAAAVVAISPQVKANNNQTAVAATII ALLGTIFTVVYTLIYPILPLGPNGYGIFSGATLHEIAHVIAAADPGGTAAVDMAVIVKLTRVALLVPVCFVVAKMVNVGT KNRFSWAELPVPWFIFGFLATSAINSFGIIPTSITDFLVICAYFLIAMSMGGLGLNVHLPSFGKMGGKPFAAAFIGSILL SLFGLALVLLFHLAG
Specific function: Unknown
COG id: COG2855
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0324 family [H]
Homologues:
Organism=Escherichia coli, GI1788482, Length=321, Percent_Identity=33.9563862928349, Blast_Score=162, Evalue=3e-41,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018383 [H]
Pfam domain/function: PF03601 Cons_hypoth698 [H]
EC number: NA
Molecular weight: Translated: 35708; Mature: 35708
Theoretical pI: Translated: 9.97; Mature: 9.97
Prosite motif: PS00142 ZINC_PROTEASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNQILFKTKTFWYGIALTFCIATLSYFLAKLPFLMILGQLVTAILIGIIIRALFPVPDKW CCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH FTGIQFSNKVILRAGIILLGFRLNLVDIYHAGWRVFLIAALCLSFGIAVVYFLAKLFGVD HCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC KKLAILVACGTGICGAAAVVAISPQVKANNNQTAVAATIIALLGTIFTVVYTLIYPILPL CHHEEEEEECCCHHHHHHHHEECCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC GPNGYGIFSGATLHEIAHVIAAADPGGTAAVDMAVIVKLTRVALLVPVCFVVAKMVNVGT CCCCCEECCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC KNRFSWAELPVPWFIFGFLATSAINSFGIIPTSITDFLVICAYFLIAMSMGGLGLNVHLP CCCCCHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECC SFGKMGGKPFAAAFIGSILLSLFGLALVLLFHLAG CHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MNQILFKTKTFWYGIALTFCIATLSYFLAKLPFLMILGQLVTAILIGIIIRALFPVPDKW CCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH FTGIQFSNKVILRAGIILLGFRLNLVDIYHAGWRVFLIAALCLSFGIAVVYFLAKLFGVD HCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC KKLAILVACGTGICGAAAVVAISPQVKANNNQTAVAATIIALLGTIFTVVYTLIYPILPL CHHEEEEEECCCHHHHHHHHEECCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC GPNGYGIFSGATLHEIAHVIAAADPGGTAAVDMAVIVKLTRVALLVPVCFVVAKMVNVGT CCCCCEECCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC KNRFSWAELPVPWFIFGFLATSAINSFGIIPTSITDFLVICAYFLIAMSMGGLGLNVHLP CCCCCHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECC SFGKMGGKPFAAAFIGSILLSLFGLALVLLFHLAG CHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11679669 [H]