Definition Listeria welshimeri serovar 6b str. SLCC5334, complete genome.
Accession NC_008555
Length 2,814,130

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The map label for this gene is 116873479

Identifier: 116873479

GI number: 116873479

Start: 2099340

End: 2100518

Strand: Direct

Name: 116873479

Synonym: lwe2063

Alternate gene names: NA

Gene position: 2099340-2100518 (Clockwise)

Preceding gene: 116873474

Following gene: 116873486

Centisome position: 74.6

GC content: 38.93

Gene sequence:

>1179_bases
ATGAAAGCAACTGGAATTGTGGTCGAATATAACCCTTTTCATAATGGGCATCAGCTACATCTAAATAAGGCGCGCGAGTT
AACCAAAGCAGATGTGGTGATTGCGGTAATGAGCGGCTCTTTTGTGCAACGCGGTGAACCAGCGATTTTGCCTAAATGGG
AGCGAACAAAGATGGCACTCGCTGCTGGTGTTGATATGGTTGTTGAACTCCCTGTCTCGTTCGCAACACAACACGCGACT
ATTTTTGCTGAAGAGTCTGTCCGTATTTTAGATGCGCTTCATGTGGATGCGTTATTTTTTGGAAGTGAACATGGAGTTAG
CGAGGATTTTTTGACTGCTGCTAAAACAGTCGTCGAACACGAAGCAAGTTTTAATCAAGCCATTCAACTTGCATTAATCG
ACAAAAAAACCTCCTATGCGAGAGCTTATACAGAAACTTTTAAACAGTCATTCGGTACAGAATTACTAGATGTCACTAAG
CCAAATAATATTCTCGGTTTTCATTACGCACTCGCTATTCAAAAACAAAATCCTACCATCTCCCTTCAAACAATGGCGCG
TATTCATGCAGGTTATCATGACATAGAAGCAAACCATGACCAAATTGCAAGTGCGACCGCGATTCGAAAGTTACTGTTGG
CAGGAAATTTAGAGGAAGCTAGTCGTTATCTTCCTGCTTCTTCTATAGAAATTTTAAAAAATTATGATGGTCCTTTTTTA
TCATGGGAAAATTATTGGGCGCTCCTAAAATATCGATTAATTCAAGCTGAAACGGATGAGCTTGAGGGGATTCGTAATGT
TAGTGAAGGTATTCAAAATCGAATGCAAATTGCGGCAACAAAAGCGCAATATTTTTCCGACTTTATAGAATCTATGAAAA
CAAAACGATATAGTAATGCGAGAATACAACGAACAGCTTTACAAATTTTATTAAATGCCAGAAACATTCCTTCCGCACCA
TACATTCGCATTCTTGGTATGAATAAAACTGGTCAAAAGTATTTATCCCATCATAAAAAAAATATTTCTCTTCCAATAGT
CACAACTGTTTCCAAAGCGGCTCCAGGACTTTTAGAAGAAGATTTACGCGCCACTAACATTTATACACTAGTAAAAGGAC
TAGAAAACTACCAAGCTGGCGACTTCCATATTCCACCAATATTAAAGAGCCAGACATAA

Upstream 100 bases:

>100_bases
ATTATAGCTTTTTTAAAGGCTTTTGTCAATGGTTTTTGGAGGACCAAAACTACGAGCTGTATTTTATGTTAAAATAGATT
ATCTAAAGGAGTGAACCGAA

Downstream 100 bases:

>100_bases
GTCTTGAAAAATAGAAACCAGAAGCAAAAATCGATTTGTACGATTTTTTGCTTCTGGTTTTTGGTTAAAAATAAACAAAG
CTAAGTTCGTTTTTCAAATG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 392; Mature: 392

Protein sequence:

>392_residues
MKATGIVVEYNPFHNGHQLHLNKARELTKADVVIAVMSGSFVQRGEPAILPKWERTKMALAAGVDMVVELPVSFATQHAT
IFAEESVRILDALHVDALFFGSEHGVSEDFLTAAKTVVEHEASFNQAIQLALIDKKTSYARAYTETFKQSFGTELLDVTK
PNNILGFHYALAIQKQNPTISLQTMARIHAGYHDIEANHDQIASATAIRKLLLAGNLEEASRYLPASSIEILKNYDGPFL
SWENYWALLKYRLIQAETDELEGIRNVSEGIQNRMQIAATKAQYFSDFIESMKTKRYSNARIQRTALQILLNARNIPSAP
YIRILGMNKTGQKYLSHHKKNISLPIVTTVSKAAPGLLEEDLRATNIYTLVKGLENYQAGDFHIPPILKSQT

Sequences:

>Translated_392_residues
MKATGIVVEYNPFHNGHQLHLNKARELTKADVVIAVMSGSFVQRGEPAILPKWERTKMALAAGVDMVVELPVSFATQHAT
IFAEESVRILDALHVDALFFGSEHGVSEDFLTAAKTVVEHEASFNQAIQLALIDKKTSYARAYTETFKQSFGTELLDVTK
PNNILGFHYALAIQKQNPTISLQTMARIHAGYHDIEANHDQIASATAIRKLLLAGNLEEASRYLPASSIEILKNYDGPFL
SWENYWALLKYRLIQAETDELEGIRNVSEGIQNRMQIAATKAQYFSDFIESMKTKRYSNARIQRTALQILLNARNIPSAP
YIRILGMNKTGQKYLSHHKKNISLPIVTTVSKAAPGLLEEDLRATNIYTLVKGLENYQAGDFHIPPILKSQT
>Mature_392_residues
MKATGIVVEYNPFHNGHQLHLNKARELTKADVVIAVMSGSFVQRGEPAILPKWERTKMALAAGVDMVVELPVSFATQHAT
IFAEESVRILDALHVDALFFGSEHGVSEDFLTAAKTVVEHEASFNQAIQLALIDKKTSYARAYTETFKQSFGTELLDVTK
PNNILGFHYALAIQKQNPTISLQTMARIHAGYHDIEANHDQIASATAIRKLLLAGNLEEASRYLPASSIEILKNYDGPFL
SWENYWALLKYRLIQAETDELEGIRNVSEGIQNRMQIAATKAQYFSDFIESMKTKRYSNARIQRTALQILLNARNIPSAP
YIRILGMNKTGQKYLSHHKKNISLPIVTTVSKAAPGLLEEDLRATNIYTLVKGLENYQAGDFHIPPILKSQT

Specific function: Unknown

COG id: COG1323

COG function: function code R; Predicted nucleotidyltransferase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0348 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y2063_LISW6 (A0AKE9)

Other databases:

- EMBL:   AM263198
- RefSeq:   YP_850260.1
- ProteinModelPortal:   A0AKE9
- SMR:   A0AKE9
- STRING:   A0AKE9
- GeneID:   4466365
- GenomeReviews:   AM263198_GR
- KEGG:   lwe:lwe2063
- NMPDR:   fig|386043.6.peg.2008
- eggNOG:   COG1323
- HOGENOM:   HBG477465
- OMA:   PNNILGF
- ProtClustDB:   PRK13670
- BioCyc:   LWEL386043:LWE2063-MONOMER
- HAMAP:   MF_01539
- InterPro:   IPR014729
- InterPro:   IPR008513
- Gene3D:   G3DSA:3.40.50.620

Pfam domain/function: PF05636 DUF795

EC number: NA

Molecular weight: Translated: 43824; Mature: 43824

Theoretical pI: Translated: 8.60; Mature: 8.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKATGIVVEYNPFHNGHQLHLNKARELTKADVVIAVMSGSFVQRGEPAILPKWERTKMAL
CCCCEEEEEECCCCCCCEEEEHHHHHHHHHCEEEEEECCCHHHCCCCCCCCCHHHHHHHH
AAGVDMVVELPVSFATQHATIFAEESVRILDALHVDALFFGSEHGVSEDFLTAAKTVVEH
HHCCCEEEECCHHHHCCCEEEEECCHHHHHHHHHHHHEEECCCCCCCHHHHHHHHHHHHH
EASFNQAIQLALIDKKTSYARAYTETFKQSFGTELLDVTKPNNILGFHYALAIQKQNPTI
HHCHHHEEEEEEECCCHHHHHHHHHHHHHHHCCCEEECCCCCCEEEEEEEEEEECCCCCE
SLQTMARIHAGYHDIEANHDQIASATAIRKLLLAGNLEEASRYLPASSIEILKNYDGPFL
EHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHCCCCHHHHHHHCCCCCEE
SWENYWALLKYRLIQAETDELEGIRNVSEGIQNRMQIAATKAQYFSDFIESMKTKRYSNA
CHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH
RIQRTALQILLNARNIPSAPYIRILGMNKTGQKYLSHHKKNISLPIVTTVSKAAPGLLEE
HHHHHHHHHHHHCCCCCCCCEEEEEECCCCHHHHHHHHHCCCCCEEEEEHHHHCCCHHHH
DLRATNIYTLVKGLENYQAGDFHIPPILKSQT
HHHHHHHHHHHHHHHCCCCCCEECCCCCCCCC
>Mature Secondary Structure
MKATGIVVEYNPFHNGHQLHLNKARELTKADVVIAVMSGSFVQRGEPAILPKWERTKMAL
CCCCEEEEEECCCCCCCEEEEHHHHHHHHHCEEEEEECCCHHHCCCCCCCCCHHHHHHHH
AAGVDMVVELPVSFATQHATIFAEESVRILDALHVDALFFGSEHGVSEDFLTAAKTVVEH
HHCCCEEEECCHHHHCCCEEEEECCHHHHHHHHHHHHEEECCCCCCCHHHHHHHHHHHHH
EASFNQAIQLALIDKKTSYARAYTETFKQSFGTELLDVTKPNNILGFHYALAIQKQNPTI
HHCHHHEEEEEEECCCHHHHHHHHHHHHHHHCCCEEECCCCCCEEEEEEEEEEECCCCCE
SLQTMARIHAGYHDIEANHDQIASATAIRKLLLAGNLEEASRYLPASSIEILKNYDGPFL
EHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHCCCCHHHHHHHCCCCCEE
SWENYWALLKYRLIQAETDELEGIRNVSEGIQNRMQIAATKAQYFSDFIESMKTKRYSNA
CHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH
RIQRTALQILLNARNIPSAPYIRILGMNKTGQKYLSHHKKNISLPIVTTVSKAAPGLLEE
HHHHHHHHHHHHCCCCCCCCEEEEEECCCCHHHHHHHHHCCCCCEEEEEHHHHCCCHHHH
DLRATNIYTLVKGLENYQAGDFHIPPILKSQT
HHHHHHHHHHHHHHHCCCCCCEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA