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The map label for this gene is yhjP [H]

Identifier: 116873474

GI number: 116873474

Start: 2095233

End: 2097005

Strand: Direct

Name: yhjP [H]

Synonym: lwe2058

Alternate gene names: 116873474

Gene position: 2095233-2097005 (Clockwise)

Preceding gene: 116873451

Following gene: 116873479

Centisome position: 74.45

GC content: 34.18

Gene sequence:

>1773_bases
ATGGATAAAGATTATTTCACTATGAGAGCCTATTTATATAATGTAACTAGCGATTCGGATGTTCCTTTTAAATTGAATGA
TTTAGCAAATATCTGGTTTTGCACTTCGAAAAACGCAAAAAGAAAACTTCATCATTATCAAGCAAAAGGAGTGCTTCAAT
ATCAACCTGGACTTGGACGTGGAAACCTTTCTCATATCGCTTTTAAAGAACCACTAGAAAAAGAAGTATTGTTGGTTTTG
AAAAAGAGTTTAGCAGAAGATTCTTTTAGTGATATTTTATTTTTATTGCAGCTTCCTATTCCCAAAAATTGGTTTTCTAA
TATATCAACAGAAATCCAGCAAATGTTTGGCTTACAATTGACGGAAAACCAACAAGAAGTTTTGCGTTCTATTATCCGAC
GTAAGTTAACGACACTTGATCCACTTCAAACCTCTGTATCCATGGAATCTTTTATCCTTACTCAAATTAGTGATTCTCTC
GTTAAATATGATGAGATAGATAAAAAAGTTGTTTCGCATATTGCACACCACTGGCATGTTACAGAAGATTACAAAAAATG
GACTTTTTATTTACGTAAGAGCATCTTATTTCATCATGGGCGAATGCTGGATAGTGAAGATGTAAAATTTACTTTACTGC
GAGCCATGCAGCCAAATACTGTTCCTTTTTGGCAATTACAAGACATTAAAAATATTCACTGCACGAATAAATTTACGGTG
ACGATTACATTAAATAATGCTGATCCATTTTTCATTCGTTACTTATGCTCTCCTAATATGGCTATTTTACCGCGAGATGT
AACTTTTGATGAATTTAAGTTAATTGCCTCCGGACCTTTTAAAATGGTGGAGAGAAATGACGAGTGCTTAATTTTAGAAG
CTTTTGATACTTATTTTTTAAAACGCCCGATACTTGATAGAGTGGAGTTTTGGACAGCCGAAAACCATCATACTTTAAAG
ACGATTCCGATGCAGTTCACTTCTGTTGATTATGAAGAAAATTCTGCCTACGTTGAACGCAGAAAAACTGGCGTTGGCGT
TAACTTCATTTGTTTTAATGGTCATAAAAATGGTGTGGCTCAACATAAAGCTTTTCGCGAGGCCATGTACCACCTATTAG
ACGCTCAAATAACCAGTCAAGAACTCTTTGAAAATTATGGCACAATTGCATCCAATTACTATCCTGAAAAATCCATTATT
CCAACAAAACATCCTGAAAAAATTGCTACTTTACTAAAAAAAGCAAACTATCAAGGAGAAAAAGTCATTTTTGGCACAAC
CCAACATCCAACTGCTTTGCAAGAATCAAAATGGATTTGTGATCGAGCTGCTAAATTCGGTATCCACTTAGAGGAAAAAT
TAGTTTCGCATGACGACGCTTCCTATTCTAGTGTGACAGAAGATGATCTTGATTTAATGATGATGGGCGAAATACCAGCA
GCTGACGGAGAACTAGCTTATCTAGATTTTTTAAACAATCCCAACCTTTTACCACAACACCTTTTTAGCCCTGAGGTGAT
TAAAGAGATTTCTACAAAATCGAATGAATTTAAATTAGAAAAAGACGCCTCCAAAAGAGACGCCTTACAAACAAAAATGG
ATAACTGGCTTACAAAAAATTTTCATTTAATTTATTTACATCATCCAGAAAAAAGTCAATCACTTCATTCCATGATAAGA
GGAGTTACAGAAAATCCATTCGGGTACTTTGACTTAAGTAAAGTATGGATTGAAACATTACCAACTAAAACTGCAAAATC
AAACTATAAATAA

Upstream 100 bases:

>100_bases
TGGTAATTTTCTGAGTTCTCTGTTAGTATAAAAGGGACGCAAGAATAAAAAAAGGGTATTATAATACGAATGTTGTCCCC
TTTTCGAATGGAGCGATTAC

Downstream 100 bases:

>100_bases
TTCCGTATAAATAGAGTGCGACATACAATAAAGCGAAAATGAAAAAACATAATCTCCAGTATCCACGAATAATTTTGCGA
TACTGGATTTCGCCTTCTTT

Product: solute-binding family 5 protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 590; Mature: 590

Protein sequence:

>590_residues
MDKDYFTMRAYLYNVTSDSDVPFKLNDLANIWFCTSKNAKRKLHHYQAKGVLQYQPGLGRGNLSHIAFKEPLEKEVLLVL
KKSLAEDSFSDILFLLQLPIPKNWFSNISTEIQQMFGLQLTENQQEVLRSIIRRKLTTLDPLQTSVSMESFILTQISDSL
VKYDEIDKKVVSHIAHHWHVTEDYKKWTFYLRKSILFHHGRMLDSEDVKFTLLRAMQPNTVPFWQLQDIKNIHCTNKFTV
TITLNNADPFFIRYLCSPNMAILPRDVTFDEFKLIASGPFKMVERNDECLILEAFDTYFLKRPILDRVEFWTAENHHTLK
TIPMQFTSVDYEENSAYVERRKTGVGVNFICFNGHKNGVAQHKAFREAMYHLLDAQITSQELFENYGTIASNYYPEKSII
PTKHPEKIATLLKKANYQGEKVIFGTTQHPTALQESKWICDRAAKFGIHLEEKLVSHDDASYSSVTEDDLDLMMMGEIPA
ADGELAYLDFLNNPNLLPQHLFSPEVIKEISTKSNEFKLEKDASKRDALQTKMDNWLTKNFHLIYLHHPEKSQSLHSMIR
GVTENPFGYFDLSKVWIETLPTKTAKSNYK

Sequences:

>Translated_590_residues
MDKDYFTMRAYLYNVTSDSDVPFKLNDLANIWFCTSKNAKRKLHHYQAKGVLQYQPGLGRGNLSHIAFKEPLEKEVLLVL
KKSLAEDSFSDILFLLQLPIPKNWFSNISTEIQQMFGLQLTENQQEVLRSIIRRKLTTLDPLQTSVSMESFILTQISDSL
VKYDEIDKKVVSHIAHHWHVTEDYKKWTFYLRKSILFHHGRMLDSEDVKFTLLRAMQPNTVPFWQLQDIKNIHCTNKFTV
TITLNNADPFFIRYLCSPNMAILPRDVTFDEFKLIASGPFKMVERNDECLILEAFDTYFLKRPILDRVEFWTAENHHTLK
TIPMQFTSVDYEENSAYVERRKTGVGVNFICFNGHKNGVAQHKAFREAMYHLLDAQITSQELFENYGTIASNYYPEKSII
PTKHPEKIATLLKKANYQGEKVIFGTTQHPTALQESKWICDRAAKFGIHLEEKLVSHDDASYSSVTEDDLDLMMMGEIPA
ADGELAYLDFLNNPNLLPQHLFSPEVIKEISTKSNEFKLEKDASKRDALQTKMDNWLTKNFHLIYLHHPEKSQSLHSMIR
GVTENPFGYFDLSKVWIETLPTKTAKSNYK
>Mature_590_residues
MDKDYFTMRAYLYNVTSDSDVPFKLNDLANIWFCTSKNAKRKLHHYQAKGVLQYQPGLGRGNLSHIAFKEPLEKEVLLVL
KKSLAEDSFSDILFLLQLPIPKNWFSNISTEIQQMFGLQLTENQQEVLRSIIRRKLTTLDPLQTSVSMESFILTQISDSL
VKYDEIDKKVVSHIAHHWHVTEDYKKWTFYLRKSILFHHGRMLDSEDVKFTLLRAMQPNTVPFWQLQDIKNIHCTNKFTV
TITLNNADPFFIRYLCSPNMAILPRDVTFDEFKLIASGPFKMVERNDECLILEAFDTYFLKRPILDRVEFWTAENHHTLK
TIPMQFTSVDYEENSAYVERRKTGVGVNFICFNGHKNGVAQHKAFREAMYHLLDAQITSQELFENYGTIASNYYPEKSII
PTKHPEKIATLLKKANYQGEKVIFGTTQHPTALQESKWICDRAAKFGIHLEEKLVSHDDASYSSVTEDDLDLMMMGEIPA
ADGELAYLDFLNNPNLLPQHLFSPEVIKEISTKSNEFKLEKDASKRDALQTKMDNWLTKNFHLIYLHHPEKSQSLHSMIR
GVTENPFGYFDLSKVWIETLPTKTAKSNYK

Specific function: Unknown

COG id: COG4533

COG function: function code R; ABC-type uncharacterized transport system, periplasmic component

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH marR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1786256, Length=567, Percent_Identity=24.3386243386243, Blast_Score=105, Evalue=9e-24,
Organism=Escherichia coli, GI1786650, Length=582, Percent_Identity=22.5085910652921, Blast_Score=104, Evalue=2e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000914
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00496 SBP_bac_5 [H]

EC number: NA

Molecular weight: Translated: 68540; Mature: 68540

Theoretical pI: Translated: 7.06; Mature: 7.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDKDYFTMRAYLYNVTSDSDVPFKLNDLANIWFCTSKNAKRKLHHYQAKGVLQYQPGLGR
CCCCCEEEEEEEEECCCCCCCCEEECCCCEEEEEECCCHHHHHHHHHHCCEEEECCCCCC
GNLSHIAFKEPLEKEVLLVLKKSLAEDSFSDILFLLQLPIPKNWFSNISTEIQQMFGLQL
CCCCHHHHHCCHHHHHHHHHHHHHCCCHHHHHHEEHCCCCCHHHHHHHHHHHHHHHCCEE
TENQQEVLRSIIRRKLTTLDPLQTSVSMESFILTQISDSLVKYDEIDKKVVSHIAHHWHV
CCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
TEDYKKWTFYLRKSILFHHGRMLDSEDVKFTLLRAMQPNTVPFWQLQDIKNIHCTNKFTV
CHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCEEEECCCCCEECCCEEEE
TITLNNADPFFIRYLCSPNMAILPRDVTFDEFKLIASGPFKMVERNDECLILEAFDTYFL
EEEECCCCCEEEEEECCCCCEEEECCCCHHHHEEEECCCHHHHCCCCCEEEEEEHHHHHH
KRPILDRVEFWTAENHHTLKTIPMQFTSVDYEENSAYVERRKTGVGVNFICFNGHKNGVA
HHHHHHHHHHEECCCCCEEEEECEEEEECCCCCCCHHHHHHHCCCCEEEEEECCCCCCHH
QHKAFREAMYHLLDAQITSQELFENYGTIASNYYPEKSIIPTKHPEKIATLLKKANYQGE
HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCC
KVIFGTTQHPTALQESKWICDRAAKFGIHLEEKLVSHDDASYSSVTEDDLDLMMMGEIPA
EEEEECCCCCCHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCCCCCCCCEEEECCCCC
ADGELAYLDFLNNPNLLPQHLFSPEVIKEISTKSNEFKLEKDASKRDALQTKMDNWLTKN
CCCCEEEEEECCCCCCCHHHCCCHHHHHHHHCCCCCEEECCCCCHHHHHHHHHHHHHCCC
FHLIYLHHPEKSQSLHSMIRGVTENPFGYFDLSKVWIETLPTKTAKSNYK
EEEEEEECCCHHHHHHHHHCCCCCCCCCEEHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MDKDYFTMRAYLYNVTSDSDVPFKLNDLANIWFCTSKNAKRKLHHYQAKGVLQYQPGLGR
CCCCCEEEEEEEEECCCCCCCCEEECCCCEEEEEECCCHHHHHHHHHHCCEEEECCCCCC
GNLSHIAFKEPLEKEVLLVLKKSLAEDSFSDILFLLQLPIPKNWFSNISTEIQQMFGLQL
CCCCHHHHHCCHHHHHHHHHHHHHCCCHHHHHHEEHCCCCCHHHHHHHHHHHHHHHCCEE
TENQQEVLRSIIRRKLTTLDPLQTSVSMESFILTQISDSLVKYDEIDKKVVSHIAHHWHV
CCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
TEDYKKWTFYLRKSILFHHGRMLDSEDVKFTLLRAMQPNTVPFWQLQDIKNIHCTNKFTV
CHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCEEEECCCCCEECCCEEEE
TITLNNADPFFIRYLCSPNMAILPRDVTFDEFKLIASGPFKMVERNDECLILEAFDTYFL
EEEECCCCCEEEEEECCCCCEEEECCCCHHHHEEEECCCHHHHCCCCCEEEEEEHHHHHH
KRPILDRVEFWTAENHHTLKTIPMQFTSVDYEENSAYVERRKTGVGVNFICFNGHKNGVA
HHHHHHHHHHEECCCCCEEEEECEEEEECCCCCCCHHHHHHHCCCCEEEEEECCCCCCHH
QHKAFREAMYHLLDAQITSQELFENYGTIASNYYPEKSIIPTKHPEKIATLLKKANYQGE
HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCC
KVIFGTTQHPTALQESKWICDRAAKFGIHLEEKLVSHDDASYSSVTEDDLDLMMMGEIPA
EEEEECCCCCCHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCCCCCCCCEEEECCCCC
ADGELAYLDFLNNPNLLPQHLFSPEVIKEISTKSNEFKLEKDASKRDALQTKMDNWLTKN
CCCCEEEEEECCCCCCCHHHCCCHHHHHHHHCCCCCEEECCCCCHHHHHHHHHHHHHCCC
FHLIYLHHPEKSQSLHSMIRGVTENPFGYFDLSKVWIETLPTKTAKSNYK
EEEEEEECCCHHHHHHHHHCCCCCCCCCEEHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9579061; 9384377 [H]