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The map label for this gene is yfeA [H]

Identifier: 116873349

GI number: 116873349

Start: 1962977

End: 1963660

Strand: Direct

Name: yfeA [H]

Synonym: lwe1933

Alternate gene names: 116873349

Gene position: 1962977-1963660 (Clockwise)

Preceding gene: 116873348

Following gene: 116873350

Centisome position: 69.75

GC content: 35.53

Gene sequence:

>684_bases
ATGAAAAAGCCCTCCATAAGTGAGATTATTGATCAAAATCTTTTTGATACAATATACGAACCGATTGTTGCTGTTGAAAA
TACGCAGGTTTTCGGATATGAATCACTCACTCGCTTAAAAACGAATCACTGGAACGCCATTAGTGATTTTATCGAAGAAG
CGGAACAGGATGGTCTGCAAAAAGCCTTTGAACTGCTCACACTACACAATGCAGTCAAACGCTTTAAAAAAGGCGAAAAT
ACGCCACTATTTGTCAATATTTCCTATGATACATTTTTAGAAAATCAAGAAGAACTACATGAAACTCTTCTTGATAACGG
GAAAATAGTTTTTGAATTTTTGGAAACATCCATGTTACCACAAGATCGCATGAACGACTTAGAAAAACAACTACATTTAT
TCCAGAAAAAGCATAAGACTAAATTTGCTATTGATGATTTTGGCTCCGGTTACGCTGATTTGCATCGCGTGTTTGCGCAC
CATTCTGATTTTGTAAAAACAGATCGCTTATTACTACGAGATTTATTCGAGAGTGATGGCAAAAAAATCTTCTTTCAGCA
ACTTCATGATTATGTTAAGAAACACCATAAATCCTTGATTGTCGAAGGTGTCGAAACAAAAGAGCAACTGAAATTTCTCC
AAGACATCGGCATTCCATATGCCCAAGGTTATTATTTTCATTAA

Upstream 100 bases:

>100_bases
ATTATCGAAAATGGATACATCCAATCCTGAAACGACTCATTTTTTCGATTATATAAATAAAGAAATAACTCTTAAGAAAT
AACGGAAAGAAGTTGGACAA

Downstream 100 bases:

>100_bases
GCTTTACAAAAGAAAATCTGATTTATTTTCAGGTTTTCTTTTTATTTGGAATCAGTTGTTATTCTCACTTCCCCCATGTA
AAATAGAATAGAATGAAAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 227; Mature: 227

Protein sequence:

>227_residues
MKKPSISEIIDQNLFDTIYEPIVAVENTQVFGYESLTRLKTNHWNAISDFIEEAEQDGLQKAFELLTLHNAVKRFKKGEN
TPLFVNISYDTFLENQEELHETLLDNGKIVFEFLETSMLPQDRMNDLEKQLHLFQKKHKTKFAIDDFGSGYADLHRVFAH
HSDFVKTDRLLLRDLFESDGKKIFFQQLHDYVKKHHKSLIVEGVETKEQLKFLQDIGIPYAQGYYFH

Sequences:

>Translated_227_residues
MKKPSISEIIDQNLFDTIYEPIVAVENTQVFGYESLTRLKTNHWNAISDFIEEAEQDGLQKAFELLTLHNAVKRFKKGEN
TPLFVNISYDTFLENQEELHETLLDNGKIVFEFLETSMLPQDRMNDLEKQLHLFQKKHKTKFAIDDFGSGYADLHRVFAH
HSDFVKTDRLLLRDLFESDGKKIFFQQLHDYVKKHHKSLIVEGVETKEQLKFLQDIGIPYAQGYYFH
>Mature_227_residues
MKKPSISEIIDQNLFDTIYEPIVAVENTQVFGYESLTRLKTNHWNAISDFIEEAEQDGLQKAFELLTLHNAVKRFKKGEN
TPLFVNISYDTFLENQEELHETLLDNGKIVFEFLETSMLPQDRMNDLEKQLHLFQKKHKTKFAIDDFGSGYADLHRVFAH
HSDFVKTDRLLLRDLFESDGKKIFFQQLHDYVKKHHKSLIVEGVETKEQLKFLQDIGIPYAQGYYFH

Specific function: Unknown

COG id: COG2200

COG function: function code T; FOG: EAL domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 GGDEF domain [H]

Homologues:

Organism=Escherichia coli, GI87082096, Length=240, Percent_Identity=27.9166666666667, Blast_Score=68, Evalue=5e-13,
Organism=Escherichia coli, GI87081845, Length=225, Percent_Identity=29.7777777777778, Blast_Score=68, Evalue=6e-13,
Organism=Escherichia coli, GI1787055, Length=226, Percent_Identity=26.1061946902655, Blast_Score=67, Evalue=8e-13,
Organism=Escherichia coli, GI1790496, Length=220, Percent_Identity=23.6363636363636, Blast_Score=66, Evalue=2e-12,
Organism=Escherichia coli, GI87081921, Length=235, Percent_Identity=23.4042553191489, Blast_Score=66, Evalue=2e-12,
Organism=Escherichia coli, GI1786507, Length=242, Percent_Identity=26.4462809917355, Blast_Score=62, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001054
- InterPro:   IPR000160
- InterPro:   IPR001633
- InterPro:   IPR007895 [H]

Pfam domain/function: PF00563 EAL; PF05231 MASE1 [H]

EC number: NA

Molecular weight: Translated: 26717; Mature: 26717

Theoretical pI: Translated: 5.91; Mature: 5.91

Prosite motif: PS50883 EAL

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKPSISEIIDQNLFDTIYEPIVAVENTQVFGYESLTRLKTNHWNAISDFIEEAEQDGLQ
CCCCCHHHHHHHHHHHHHHHHHHHHCCCEEECHHHHHHHHHCCCHHHHHHHHHHHHHHHH
KAFELLTLHNAVKRFKKGENTPLFVNISYDTFLENQEELHETLLDNGKIVFEFLETSMLP
HHHHHHHHHHHHHHHHCCCCCEEEEEECHHHHHCCHHHHHHHHHHCCHHHHHHHHHHCCC
QDRMNDLEKQLHLFQKKHKTKFAIDDFGSGYADLHRVFAHHSDFVKTDRLLLRDLFESDG
HHHHHHHHHHHHHHHHHHCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
KKIFFQQLHDYVKKHHKSLIVEGVETKEQLKFLQDIGIPYAQGYYFH
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MKKPSISEIIDQNLFDTIYEPIVAVENTQVFGYESLTRLKTNHWNAISDFIEEAEQDGLQ
CCCCCHHHHHHHHHHHHHHHHHHHHCCCEEECHHHHHHHHHCCCHHHHHHHHHHHHHHHH
KAFELLTLHNAVKRFKKGENTPLFVNISYDTFLENQEELHETLLDNGKIVFEFLETSMLP
HHHHHHHHHHHHHHHHCCCCCEEEEEECHHHHHCCHHHHHHHHHHCCHHHHHHHHHHCCC
QDRMNDLEKQLHLFQKKHKTKFAIDDFGSGYADLHRVFAHHSDFVKTDRLLLRDLFESDG
HHHHHHHHHHHHHHHHHHCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
KKIFFQQLHDYVKKHHKSLIVEGVETKEQLKFLQDIGIPYAQGYYFH
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9205837; 9278503; 2201776 [H]