| Definition | Listeria welshimeri serovar 6b str. SLCC5334, complete genome. |
|---|---|
| Accession | NC_008555 |
| Length | 2,814,130 |
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The map label for this gene is abcX [H]
Identifier: 116873212
GI number: 116873212
Start: 1829444
End: 1830217
Strand: Direct
Name: abcX [H]
Synonym: lwe1796
Alternate gene names: 116873212
Gene position: 1829444-1830217 (Clockwise)
Preceding gene: 116873195
Following gene: 116873213
Centisome position: 65.01
GC content: 36.69
Gene sequence:
>774_bases ATGTTTGCATTTGAACATGTTTATTTAAAGCGTGAAAACAAAACTATCTTATCGGATATTAATTGGGTCGTTAATGAGAA TGAAAATTGGGCGATACTTGGGCTTAACGGATCAGGTAAAACTACTTTACTTCAGCTTTTGAACGGATATCTTTGGCCAA GTAGTGGGAAACTTCAAGTGCTCGGGCATATTTTTGGACAAGCGTCTTTGCCAGAATTGCGGAAATCAATTGGGTGGGTT AGCAATGCTTTAGATCATCGGTTGAAAGATTATGAGTTAAGTGAACAAATTGTGCTTAGTGGCAAGTTTGCTAGTATTGG TATTTATACGAAAGTGACAGATTCTGAGATAAATCAAGCGAAAACAATACTTTCTGATTGTGGTGGTGTTTCCCTTATAG GAAAATCTTATAACATTTTATCTCAAGGAGAACGCCAAATTGTTTTAATTGCTCGTGCTTTAATGGCAAGTCCTAAATTA CTGATTTTGGACGAACCTTGTAATGGGCTTGATCTATTCGCAAAAAATCGTTTGCTAGAACGTATCAAAACAATTGCAGC ACTGCCTGAATCACCTACCATGCTTTTTGTTACACATCATACGGAAGAAATCCCCTCCTGCTTTGATAATATCATTTTAC TACGTGACGGGGAAATAACTCATCACGGAAAAACAGAAAAACTTTTAACAGAAAAAGTTCTGCAAGATTTTTATCAAAAG CCTGTGGAGTTAATTCGAATGCAAGATGGTGCCATTGCGGTCTATCCAAAATAA
Upstream 100 bases:
>100_bases ATTTTTAGCTTCGGTAATTATTTCTTCTTTATTCATTGTTTTAAGCTCCTTTTTAATTCATTTTCATGTACAATGGTAGA AAATAGAAATGGGGTATTCG
Downstream 100 bases:
>100_bases ATGAACTGATTATAGTAGGAAAATGAGTATGTGAAGGAGCGAAATGCGTTGTATGAAACAATGATTGCAAAAGCTAGTAC CCACGAATTACTTGATATGA
Product: ABC transporter ATP-binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 257; Mature: 257
Protein sequence:
>257_residues MFAFEHVYLKRENKTILSDINWVVNENENWAILGLNGSGKTTLLQLLNGYLWPSSGKLQVLGHIFGQASLPELRKSIGWV SNALDHRLKDYELSEQIVLSGKFASIGIYTKVTDSEINQAKTILSDCGGVSLIGKSYNILSQGERQIVLIARALMASPKL LILDEPCNGLDLFAKNRLLERIKTIAALPESPTMLFVTHHTEEIPSCFDNIILLRDGEITHHGKTEKLLTEKVLQDFYQK PVELIRMQDGAIAVYPK
Sequences:
>Translated_257_residues MFAFEHVYLKRENKTILSDINWVVNENENWAILGLNGSGKTTLLQLLNGYLWPSSGKLQVLGHIFGQASLPELRKSIGWV SNALDHRLKDYELSEQIVLSGKFASIGIYTKVTDSEINQAKTILSDCGGVSLIGKSYNILSQGERQIVLIARALMASPKL LILDEPCNGLDLFAKNRLLERIKTIAALPESPTMLFVTHHTEEIPSCFDNIILLRDGEITHHGKTEKLLTEKVLQDFYQK PVELIRMQDGAIAVYPK >Mature_257_residues MFAFEHVYLKRENKTILSDINWVVNENENWAILGLNGSGKTTLLQLLNGYLWPSSGKLQVLGHIFGQASLPELRKSIGWV SNALDHRLKDYELSEQIVLSGKFASIGIYTKVTDSEINQAKTILSDCGGVSLIGKSYNILSQGERQIVLIARALMASPKL LILDEPCNGLDLFAKNRLLERIKTIAALPESPTMLFVTHHTEEIPSCFDNIILLRDGEITHHGKTEKLLTEKVLQDFYQK PVELIRMQDGAIAVYPK
Specific function: Involved In The Transport Of Molybdenum Into The Cell. Involved In Photorepair. Could Act On Uv-Induced DNA Damage Other Than Pyrimidine Dimers. [C]
COG id: COG1119
COG function: function code P; ABC-type molybdenum transport system, ATPase component/photorepair protein PhrA
Gene ontology:
Cell location: Inner Membrane-Associated [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transporter domain [H]
Homologues:
Organism=Homo sapiens, GI171184400, Length=233, Percent_Identity=30.0429184549356, Blast_Score=80, Evalue=1e-15, Organism=Homo sapiens, GI255708477, Length=238, Percent_Identity=29.4117647058824, Blast_Score=77, Evalue=1e-14, Organism=Homo sapiens, GI42490749, Length=236, Percent_Identity=27.9661016949153, Blast_Score=76, Evalue=3e-14, Organism=Homo sapiens, GI116734710, Length=217, Percent_Identity=27.6497695852535, Blast_Score=73, Evalue=2e-13, Organism=Homo sapiens, GI42741659, Length=239, Percent_Identity=26.7782426778243, Blast_Score=72, Evalue=5e-13, Organism=Homo sapiens, GI4505771, Length=239, Percent_Identity=24.6861924686192, Blast_Score=71, Evalue=1e-12, Organism=Homo sapiens, GI9961252, Length=239, Percent_Identity=24.6861924686192, Blast_Score=71, Evalue=1e-12, Organism=Homo sapiens, GI31657092, Length=212, Percent_Identity=27.8301886792453, Blast_Score=70, Evalue=1e-12, Organism=Homo sapiens, GI9665248, Length=236, Percent_Identity=27.5423728813559, Blast_Score=70, Evalue=2e-12, Organism=Homo sapiens, GI66529005, Length=227, Percent_Identity=28.6343612334802, Blast_Score=69, Evalue=5e-12, Organism=Homo sapiens, GI47078218, Length=260, Percent_Identity=26.5384615384615, Blast_Score=67, Evalue=2e-11, Organism=Homo sapiens, GI105990541, Length=206, Percent_Identity=27.6699029126214, Blast_Score=67, Evalue=2e-11, Organism=Homo sapiens, GI45446740, Length=260, Percent_Identity=26.5384615384615, Blast_Score=67, Evalue=2e-11, Organism=Homo sapiens, GI9961250, Length=235, Percent_Identity=26.8085106382979, Blast_Score=66, Evalue=3e-11, Organism=Homo sapiens, GI62526033, Length=227, Percent_Identity=29.5154185022026, Blast_Score=64, Evalue=1e-10, Organism=Escherichia coli, GI1786975, Length=201, Percent_Identity=36.318407960199, Blast_Score=115, Evalue=4e-27, Organism=Escherichia coli, GI1786253, Length=230, Percent_Identity=27.8260869565217, Blast_Score=83, Evalue=2e-17, Organism=Escherichia coli, GI1787792, Length=241, Percent_Identity=26.5560165975104, Blast_Score=82, Evalue=3e-17, Organism=Escherichia coli, GI1788450, Length=242, Percent_Identity=25.6198347107438, Blast_Score=78, Evalue=6e-16, Organism=Escherichia coli, GI1788225, Length=236, Percent_Identity=30.5084745762712, Blast_Score=77, Evalue=9e-16, Organism=Escherichia coli, GI87081791, Length=225, Percent_Identity=27.1111111111111, Blast_Score=77, Evalue=1e-15, Organism=Escherichia coli, GI1787112, Length=228, Percent_Identity=30.2631578947368, Blast_Score=77, Evalue=1e-15, Organism=Escherichia coli, GI87081834, Length=210, Percent_Identity=30.4761904761905, Blast_Score=77, Evalue=1e-15, Organism=Escherichia coli, GI1786654, Length=235, Percent_Identity=26.3829787234043, Blast_Score=76, Evalue=2e-15, Organism=Escherichia coli, GI1790467, Length=221, Percent_Identity=31.2217194570136, Blast_Score=76, Evalue=2e-15, Organism=Escherichia coli, GI1789032, Length=220, Percent_Identity=26.3636363636364, Blast_Score=75, Evalue=5e-15, Organism=Escherichia coli, GI87081709, Length=230, Percent_Identity=25.6521739130435, Blast_Score=74, Evalue=7e-15, Organism=Escherichia coli, GI1786319, Length=215, Percent_Identity=26.046511627907, Blast_Score=74, Evalue=7e-15, Organism=Escherichia coli, GI1790190, Length=225, Percent_Identity=27.1111111111111, Blast_Score=72, Evalue=3e-14, Organism=Escherichia coli, GI1787089, Length=215, Percent_Identity=26.9767441860465, Blast_Score=72, Evalue=5e-14, Organism=Escherichia coli, GI1787712, Length=203, Percent_Identity=29.5566502463054, Blast_Score=71, Evalue=6e-14, Organism=Escherichia coli, GI1787113, Length=217, Percent_Identity=29.9539170506912, Blast_Score=71, Evalue=6e-14, Organism=Escherichia coli, GI87081782, Length=212, Percent_Identity=26.8867924528302, Blast_Score=71, Evalue=8e-14, Organism=Escherichia coli, GI1786345, Length=253, Percent_Identity=22.1343873517787, Blast_Score=70, Evalue=1e-13, Organism=Escherichia coli, GI1787029, Length=245, Percent_Identity=26.530612244898, Blast_Score=69, Evalue=2e-13, Organism=Escherichia coli, GI1786803, Length=235, Percent_Identity=24.6808510638298, Blast_Score=69, Evalue=3e-13, Organism=Escherichia coli, GI1790525, Length=229, Percent_Identity=23.5807860262009, Blast_Score=68, Evalue=5e-13, Organism=Escherichia coli, GI1789873, Length=235, Percent_Identity=29.3617021276596, Blast_Score=67, Evalue=8e-13, Organism=Escherichia coli, GI1787143, Length=221, Percent_Identity=26.6968325791855, Blast_Score=67, Evalue=9e-13, Organism=Escherichia coli, GI1786398, Length=240, Percent_Identity=24.5833333333333, Blast_Score=67, Evalue=1e-12, Organism=Escherichia coli, GI1788897, Length=228, Percent_Identity=27.1929824561404, Blast_Score=66, Evalue=3e-12, Organism=Escherichia coli, GI48995001, Length=203, Percent_Identity=26.6009852216749, Blast_Score=65, Evalue=4e-12, Organism=Escherichia coli, GI48994943, Length=223, Percent_Identity=25.1121076233184, Blast_Score=65, Evalue=5e-12, Organism=Escherichia coli, GI1788210, Length=203, Percent_Identity=28.5714285714286, Blast_Score=63, Evalue=2e-11, Organism=Escherichia coli, GI1786872, Length=208, Percent_Identity=27.4038461538462, Blast_Score=62, Evalue=4e-11, Organism=Escherichia coli, GI1786981, Length=226, Percent_Identity=28.3185840707965, Blast_Score=62, Evalue=5e-11, Organism=Escherichia coli, GI1789593, Length=232, Percent_Identity=24.1379310344828, Blast_Score=61, Evalue=6e-11, Organism=Escherichia coli, GI1789991, Length=245, Percent_Identity=24.4897959183673, Blast_Score=61, Evalue=7e-11, Organism=Caenorhabditis elegans, GI25146777, Length=234, Percent_Identity=28.6324786324786, Blast_Score=78, Evalue=5e-15, Organism=Caenorhabditis elegans, GI212646699, Length=233, Percent_Identity=26.1802575107296, Blast_Score=76, Evalue=2e-14, Organism=Caenorhabditis elegans, GI193211015, Length=235, Percent_Identity=28.5106382978723, Blast_Score=75, Evalue=3e-14, Organism=Caenorhabditis elegans, GI71996809, Length=235, Percent_Identity=28.5106382978723, Blast_Score=75, Evalue=3e-14, Organism=Caenorhabditis elegans, GI193211017, Length=235, Percent_Identity=28.5106382978723, Blast_Score=75, Evalue=3e-14, Organism=Caenorhabditis elegans, GI115535101, Length=255, Percent_Identity=27.843137254902, Blast_Score=75, Evalue=4e-14, Organism=Caenorhabditis elegans, GI17558664, Length=228, Percent_Identity=27.6315789473684, Blast_Score=74, Evalue=9e-14, Organism=Caenorhabditis elegans, GI193202349, Length=229, Percent_Identity=27.0742358078603, Blast_Score=73, Evalue=2e-13, Organism=Caenorhabditis elegans, GI17567269, Length=255, Percent_Identity=26.6666666666667, Blast_Score=70, Evalue=2e-12, Organism=Caenorhabditis elegans, GI17541710, Length=229, Percent_Identity=28.3842794759825, Blast_Score=69, Evalue=2e-12, Organism=Caenorhabditis elegans, GI17567265, Length=252, Percent_Identity=26.1904761904762, Blast_Score=69, Evalue=3e-12, Organism=Caenorhabditis elegans, GI193209708, Length=234, Percent_Identity=28.6324786324786, Blast_Score=68, Evalue=5e-12, Organism=Caenorhabditis elegans, GI17569145, Length=245, Percent_Identity=26.530612244898, Blast_Score=68, Evalue=6e-12, Organism=Caenorhabditis elegans, GI17569143, Length=246, Percent_Identity=26.8292682926829, Blast_Score=67, Evalue=1e-11, Organism=Caenorhabditis elegans, GI115533592, Length=254, Percent_Identity=24.8031496062992, Blast_Score=66, Evalue=2e-11, Organism=Caenorhabditis elegans, GI115533608, Length=208, Percent_Identity=28.8461538461538, Blast_Score=65, Evalue=3e-11, Organism=Caenorhabditis elegans, GI71996550, Length=239, Percent_Identity=27.6150627615063, Blast_Score=65, Evalue=4e-11, Organism=Saccharomyces cerevisiae, GI6324985, Length=237, Percent_Identity=26.1603375527426, Blast_Score=68, Evalue=1e-12, Organism=Saccharomyces cerevisiae, GI6322980, Length=235, Percent_Identity=23.8297872340426, Blast_Score=65, Evalue=1e-11, Organism=Saccharomyces cerevisiae, GI6324498, Length=230, Percent_Identity=27.8260869565217, Blast_Score=64, Evalue=2e-11, Organism=Drosophila melanogaster, GI281363262, Length=242, Percent_Identity=29.3388429752066, Blast_Score=80, Evalue=1e-15, Organism=Drosophila melanogaster, GI24653245, Length=242, Percent_Identity=29.3388429752066, Blast_Score=80, Evalue=1e-15, Organism=Drosophila melanogaster, GI24641565, Length=251, Percent_Identity=27.0916334661355, Blast_Score=78, Evalue=7e-15, Organism=Drosophila melanogaster, GI116007184, Length=222, Percent_Identity=29.7297297297297, Blast_Score=77, Evalue=1e-14, Organism=Drosophila melanogaster, GI221500365, Length=222, Percent_Identity=29.7297297297297, Blast_Score=77, Evalue=1e-14, Organism=Drosophila melanogaster, GI24659289, Length=260, Percent_Identity=28.0769230769231, Blast_Score=75, Evalue=3e-14, Organism=Drosophila melanogaster, GI28574744, Length=225, Percent_Identity=28, Blast_Score=75, Evalue=5e-14, Organism=Drosophila melanogaster, GI23397593, Length=234, Percent_Identity=27.7777777777778, Blast_Score=73, Evalue=2e-13, Organism=Drosophila melanogaster, GI17136662, Length=227, Percent_Identity=24.6696035242291, Blast_Score=70, Evalue=1e-12, Organism=Drosophila melanogaster, GI85726357, Length=244, Percent_Identity=25.4098360655738, Blast_Score=67, Evalue=1e-11, Organism=Drosophila melanogaster, GI45552359, Length=226, Percent_Identity=25.2212389380531, Blast_Score=67, Evalue=1e-11, Organism=Drosophila melanogaster, GI45552357, Length=226, Percent_Identity=25.2212389380531, Blast_Score=67, Evalue=1e-11, Organism=Drosophila melanogaster, GI45550972, Length=226, Percent_Identity=25.2212389380531, Blast_Score=67, Evalue=1e-11, Organism=Drosophila melanogaster, GI45552355, Length=226, Percent_Identity=25.2212389380531, Blast_Score=67, Evalue=1e-11, Organism=Drosophila melanogaster, GI45552341, Length=226, Percent_Identity=25.2212389380531, Blast_Score=67, Evalue=1e-11, Organism=Drosophila melanogaster, GI45552363, Length=226, Percent_Identity=25.2212389380531, Blast_Score=67, Evalue=1e-11, Organism=Drosophila melanogaster, GI45552345, Length=226, Percent_Identity=25.2212389380531, Blast_Score=67, Evalue=1e-11, Organism=Drosophila melanogaster, GI45552343, Length=226, Percent_Identity=25.2212389380531, Blast_Score=67, Evalue=1e-11, Organism=Drosophila melanogaster, GI45552361, Length=226, Percent_Identity=25.2212389380531, Blast_Score=67, Evalue=1e-11, Organism=Drosophila melanogaster, GI45552353, Length=226, Percent_Identity=25.2212389380531, Blast_Score=67, Evalue=1e-11, Organism=Drosophila melanogaster, GI45552349, Length=226, Percent_Identity=25.2212389380531, Blast_Score=67, Evalue=1e-11, Organism=Drosophila melanogaster, GI45552335, Length=226, Percent_Identity=25.2212389380531, Blast_Score=67, Evalue=1e-11, Organism=Drosophila melanogaster, GI45552351, Length=226, Percent_Identity=25.2212389380531, Blast_Score=67, Evalue=1e-11, Organism=Drosophila melanogaster, GI45552339, Length=226, Percent_Identity=25.2212389380531, Blast_Score=67, Evalue=1e-11, Organism=Drosophila melanogaster, GI45552347, Length=226, Percent_Identity=25.2212389380531, Blast_Score=67, Evalue=1e-11, Organism=Drosophila melanogaster, GI24583969, Length=226, Percent_Identity=25.2212389380531, Blast_Score=67, Evalue=1e-11, Organism=Drosophila melanogaster, GI45552337, Length=226, Percent_Identity=25.2212389380531, Blast_Score=67, Evalue=1e-11, Organism=Drosophila melanogaster, GI221512771, Length=205, Percent_Identity=26.8292682926829, Blast_Score=66, Evalue=2e-11, Organism=Drosophila melanogaster, GI24642252, Length=209, Percent_Identity=28.2296650717703, Blast_Score=65, Evalue=4e-11, Organism=Drosophila melanogaster, GI18859989, Length=209, Percent_Identity=28.2296650717703, Blast_Score=65, Evalue=4e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003439 - InterPro: IPR017871 - InterPro: IPR003593 [H]
Pfam domain/function: PF00005 ABC_tran [H]
EC number: NA
Molecular weight: Translated: 28801; Mature: 28801
Theoretical pI: Translated: 6.88; Mature: 6.88
Prosite motif: PS50893 ABC_TRANSPORTER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFAFEHVYLKRENKTILSDINWVVNENENWAILGLNGSGKTTLLQLLNGYLWPSSGKLQV CCCEEEEEEEECCCEEEECCCEEEECCCCEEEEEECCCCHHHHHHHHHCCCCCCCCCEEE LGHIFGQASLPELRKSIGWVSNALDHRLKDYELSEQIVLSGKFASIGIYTKVTDSEINQA EEHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCEEEEEEEEEECCHHHHHH KTILSDCGGVSLIGKSYNILSQGERQIVLIARALMASPKLLILDEPCNGLDLFAKNRLLE HHHHHHCCCEEEECCCCCHHHCCCCEEHEEEHHHHCCCCEEEEECCCCCHHHHHHHHHHH RIKTIAALPESPTMLFVTHHTEEIPSCFDNIILLRDGEITHHGKTEKLLTEKVLQDFYQK HHHHHHCCCCCCCEEEEECCCHHHHHHHHCEEEEECCCCCCCCCHHHHHHHHHHHHHHHH PVELIRMQDGAIAVYPK HHHHEEECCCEEEEECC >Mature Secondary Structure MFAFEHVYLKRENKTILSDINWVVNENENWAILGLNGSGKTTLLQLLNGYLWPSSGKLQV CCCEEEEEEEECCCEEEECCCEEEECCCCEEEEEECCCCHHHHHHHHHCCCCCCCCCEEE LGHIFGQASLPELRKSIGWVSNALDHRLKDYELSEQIVLSGKFASIGIYTKVTDSEINQA EEHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCEEEEEEEEEECCHHHHHH KTILSDCGGVSLIGKSYNILSQGERQIVLIARALMASPKLLILDEPCNGLDLFAKNRLLE HHHHHHCCCEEEECCCCCHHHCCCCEEHEEEHHHHCCCCEEEEECCCCCHHHHHHHHHHH RIKTIAALPESPTMLFVTHHTEEIPSCFDNIILLRDGEITHHGKTEKLLTEKVLQDFYQK HHHHHHCCCCCCCEEEEECCCHHHHHHHHCEEEEECCCCCCCCCHHHHHHHHHHHHHHHH PVELIRMQDGAIAVYPK HHHHEEECCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11029425; 12397186 [H]