| Definition | Listeria welshimeri serovar 6b str. SLCC5334, complete genome. |
|---|---|
| Accession | NC_008555 |
| Length | 2,814,130 |
Click here to switch to the map view.
The map label for this gene is yjeF [C]
Identifier: 116873054
GI number: 116873054
Start: 1643401
End: 1644231
Strand: Direct
Name: yjeF [C]
Synonym: lwe1638
Alternate gene names: 116873054
Gene position: 1643401-1644231 (Clockwise)
Preceding gene: 116873044
Following gene: 116873066
Centisome position: 58.4
GC content: 40.07
Gene sequence:
>831_bases GTGAAGAAGATTACACCGAAAGCAATGTGTGCATGGATTCCAAAACGAGAAGATGAAACACATAAGGGAGATTATGGACG CGTTTTAATTGTCGCTGGAAATAAGCAATTTGGCGGTGCTGCTATTATGGCTGCAGAAGCCTGTGTCAAAAGTGGTGCAG GTTTAACAACGGTTGCTTCTGATAGTGTTAACCGCCCCGCCCTTCAAACAAGAATTCCTGAATGTATGTTCATTGACTAT GAAAATATCACTAGTTTAAGTGACCAAATAAGTCAATTTGATACCATTTTAATTGGTCCAGGTCTTGGGCTAGATGCTCA TGCAGAAGAAATTTTTCGCTTGGTATTAGAAAAATCAACTGAACATCAGCAAATAATTATTGATGGTGATGGTATTACTA TATATGCTAAGGGAGAAATTTCGCACCCCGCATCCAAGCTTACCTTTACACCACATTTGGGAGAATGGGAACGGCTTAAA GTTTTAGTACCTAATGCGGAAACAATGCTAGATGCCGCAATAGCTTTAGATGCAACAATAGTTCTCAAAGGCCACCGTAC AAAAGTATATTCCGGTGAAACAGTTTGGCAAAATATGTATGGAACTCCTGCTATGGCAACAGGTGGTATGGGTGATACGC TGGCAGGAACGATTTGTGGGTTAATGGCACAAACAGAAAAACCAATTACAGGCACACTCGCTGCCGTTTTTCTTCATAGC TACATCGGAGAAATTTTAGCGAAAAAACGTTATGTTGTGTTACCAACTGAAATCGCCGAAGAACTACCAACATATTTAAA AATTTTTAGCGAAACAGACGAACACGCTTAA
Upstream 100 bases:
>100_bases CAAAAGCCTCCTTTTCATTTAAGATAAACATGATTTATCTGTTCTTTATTTTACCCGGTTGAGTAGATAAATGCCAGTGT CATAAGGAGGTTTTACAAAA
Downstream 100 bases:
>100_bases AAAAATCCTCCCCGTTAAAAAGGGAGGATTTTTTCTATGCTTTTTTAAATTTTCTAGTCCATAAAGTTAATTTTTCATTC CATATAAAGTAACAACCTAT
Product: hypothetical protein
Products: NA
Alternate protein names: ORF1091 [H]
Number of amino acids: Translated: 276; Mature: 276
Protein sequence:
>276_residues MKKITPKAMCAWIPKREDETHKGDYGRVLIVAGNKQFGGAAIMAAEACVKSGAGLTTVASDSVNRPALQTRIPECMFIDY ENITSLSDQISQFDTILIGPGLGLDAHAEEIFRLVLEKSTEHQQIIIDGDGITIYAKGEISHPASKLTFTPHLGEWERLK VLVPNAETMLDAAIALDATIVLKGHRTKVYSGETVWQNMYGTPAMATGGMGDTLAGTICGLMAQTEKPITGTLAAVFLHS YIGEILAKKRYVVLPTEIAEELPTYLKIFSETDEHA
Sequences:
>Translated_276_residues MKKITPKAMCAWIPKREDETHKGDYGRVLIVAGNKQFGGAAIMAAEACVKSGAGLTTVASDSVNRPALQTRIPECMFIDY ENITSLSDQISQFDTILIGPGLGLDAHAEEIFRLVLEKSTEHQQIIIDGDGITIYAKGEISHPASKLTFTPHLGEWERLK VLVPNAETMLDAAIALDATIVLKGHRTKVYSGETVWQNMYGTPAMATGGMGDTLAGTICGLMAQTEKPITGTLAAVFLHS YIGEILAKKRYVVLPTEIAEELPTYLKIFSETDEHA >Mature_276_residues MKKITPKAMCAWIPKREDETHKGDYGRVLIVAGNKQFGGAAIMAAEACVKSGAGLTTVASDSVNRPALQTRIPECMFIDY ENITSLSDQISQFDTILIGPGLGLDAHAEEIFRLVLEKSTEHQQIIIDGDGITIYAKGEISHPASKLTFTPHLGEWERLK VLVPNAETMLDAAIALDATIVLKGHRTKVYSGETVWQNMYGTPAMATGGMGDTLAGTICGLMAQTEKPITGTLAAVFLHS YIGEILAKKRYVVLPTEIAEELPTYLKIFSETDEHA
Specific function: Unknown
COG id: COG0063
COG function: function code G; Predicted sugar kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 YjeF C-terminal domain [H]
Homologues:
Organism=Homo sapiens, GI119709830, Length=221, Percent_Identity=28.0542986425339, Blast_Score=72, Evalue=6e-13, Organism=Escherichia coli, GI1790609, Length=258, Percent_Identity=30.6201550387597, Blast_Score=96, Evalue=2e-21, Organism=Saccharomyces cerevisiae, GI6322698, Length=246, Percent_Identity=27.6422764227642, Blast_Score=72, Evalue=9e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017953 - InterPro: IPR000631 [H]
Pfam domain/function: PF01256 Carb_kinase [H]
EC number: NA
Molecular weight: Translated: 29936; Mature: 29936
Theoretical pI: Translated: 5.36; Mature: 5.36
Prosite motif: PS01050 UPF0031_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKITPKAMCAWIPKREDETHKGDYGRVLIVAGNKQFGGAAIMAAEACVKSGAGLTTVAS CCCCCHHHHHEECCCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCEEEEEC DSVNRPALQTRIPECMFIDYENITSLSDQISQFDTILIGPGLGLDAHAEEIFRLVLEKST CCCCCCHHHHCCCCEEEEEHHHHHHHHHHHHHCCEEEEECCCCCCHHHHHHHHHHHHCCC EHQQIIIDGDGITIYAKGEISHPASKLTFTPHLGEWERLKVLVPNAETMLDAAIALDATI CCCEEEEECCCEEEEECCCCCCCCHHEEECCCCCCCCEEEEECCCHHHHHHHHHHEEEEE VLKGHRTKVYSGETVWQNMYGTPAMATGGMGDTLAGTICGLMAQTEKPITGTLAAVFLHS EEECCCEEEECCCHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHH YIGEILAKKRYVVLPTEIAEELPTYLKIFSETDEHA HHHHHHHCCCEEEECHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MKKITPKAMCAWIPKREDETHKGDYGRVLIVAGNKQFGGAAIMAAEACVKSGAGLTTVAS CCCCCHHHHHEECCCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCEEEEEC DSVNRPALQTRIPECMFIDYENITSLSDQISQFDTILIGPGLGLDAHAEEIFRLVLEKST CCCCCCHHHHCCCCEEEEEHHHHHHHHHHHHHCCEEEEECCCCCCHHHHHHHHHHHHCCC EHQQIIIDGDGITIYAKGEISHPASKLTFTPHLGEWERLKVLVPNAETMLDAAIALDATI CCCEEEEECCCEEEEECCCCCCCCHHEEECCCCCCCCEEEEECCCHHHHHHHHHHEEEEE VLKGHRTKVYSGETVWQNMYGTPAMATGGMGDTLAGTICGLMAQTEKPITGTLAAVFLHS EEECCCEEEECCCHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHH YIGEILAKKRYVVLPTEIAEELPTYLKIFSETDEHA HHHHHHHCCCEEEECHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8930919 [H]