Definition Listeria welshimeri serovar 6b str. SLCC5334, complete genome.
Accession NC_008555
Length 2,814,130

Click here to switch to the map view.

The map label for this gene is yjeF [C]

Identifier: 116873054

GI number: 116873054

Start: 1643401

End: 1644231

Strand: Direct

Name: yjeF [C]

Synonym: lwe1638

Alternate gene names: 116873054

Gene position: 1643401-1644231 (Clockwise)

Preceding gene: 116873044

Following gene: 116873066

Centisome position: 58.4

GC content: 40.07

Gene sequence:

>831_bases
GTGAAGAAGATTACACCGAAAGCAATGTGTGCATGGATTCCAAAACGAGAAGATGAAACACATAAGGGAGATTATGGACG
CGTTTTAATTGTCGCTGGAAATAAGCAATTTGGCGGTGCTGCTATTATGGCTGCAGAAGCCTGTGTCAAAAGTGGTGCAG
GTTTAACAACGGTTGCTTCTGATAGTGTTAACCGCCCCGCCCTTCAAACAAGAATTCCTGAATGTATGTTCATTGACTAT
GAAAATATCACTAGTTTAAGTGACCAAATAAGTCAATTTGATACCATTTTAATTGGTCCAGGTCTTGGGCTAGATGCTCA
TGCAGAAGAAATTTTTCGCTTGGTATTAGAAAAATCAACTGAACATCAGCAAATAATTATTGATGGTGATGGTATTACTA
TATATGCTAAGGGAGAAATTTCGCACCCCGCATCCAAGCTTACCTTTACACCACATTTGGGAGAATGGGAACGGCTTAAA
GTTTTAGTACCTAATGCGGAAACAATGCTAGATGCCGCAATAGCTTTAGATGCAACAATAGTTCTCAAAGGCCACCGTAC
AAAAGTATATTCCGGTGAAACAGTTTGGCAAAATATGTATGGAACTCCTGCTATGGCAACAGGTGGTATGGGTGATACGC
TGGCAGGAACGATTTGTGGGTTAATGGCACAAACAGAAAAACCAATTACAGGCACACTCGCTGCCGTTTTTCTTCATAGC
TACATCGGAGAAATTTTAGCGAAAAAACGTTATGTTGTGTTACCAACTGAAATCGCCGAAGAACTACCAACATATTTAAA
AATTTTTAGCGAAACAGACGAACACGCTTAA

Upstream 100 bases:

>100_bases
CAAAAGCCTCCTTTTCATTTAAGATAAACATGATTTATCTGTTCTTTATTTTACCCGGTTGAGTAGATAAATGCCAGTGT
CATAAGGAGGTTTTACAAAA

Downstream 100 bases:

>100_bases
AAAAATCCTCCCCGTTAAAAAGGGAGGATTTTTTCTATGCTTTTTTAAATTTTCTAGTCCATAAAGTTAATTTTTCATTC
CATATAAAGTAACAACCTAT

Product: hypothetical protein

Products: NA

Alternate protein names: ORF1091 [H]

Number of amino acids: Translated: 276; Mature: 276

Protein sequence:

>276_residues
MKKITPKAMCAWIPKREDETHKGDYGRVLIVAGNKQFGGAAIMAAEACVKSGAGLTTVASDSVNRPALQTRIPECMFIDY
ENITSLSDQISQFDTILIGPGLGLDAHAEEIFRLVLEKSTEHQQIIIDGDGITIYAKGEISHPASKLTFTPHLGEWERLK
VLVPNAETMLDAAIALDATIVLKGHRTKVYSGETVWQNMYGTPAMATGGMGDTLAGTICGLMAQTEKPITGTLAAVFLHS
YIGEILAKKRYVVLPTEIAEELPTYLKIFSETDEHA

Sequences:

>Translated_276_residues
MKKITPKAMCAWIPKREDETHKGDYGRVLIVAGNKQFGGAAIMAAEACVKSGAGLTTVASDSVNRPALQTRIPECMFIDY
ENITSLSDQISQFDTILIGPGLGLDAHAEEIFRLVLEKSTEHQQIIIDGDGITIYAKGEISHPASKLTFTPHLGEWERLK
VLVPNAETMLDAAIALDATIVLKGHRTKVYSGETVWQNMYGTPAMATGGMGDTLAGTICGLMAQTEKPITGTLAAVFLHS
YIGEILAKKRYVVLPTEIAEELPTYLKIFSETDEHA
>Mature_276_residues
MKKITPKAMCAWIPKREDETHKGDYGRVLIVAGNKQFGGAAIMAAEACVKSGAGLTTVASDSVNRPALQTRIPECMFIDY
ENITSLSDQISQFDTILIGPGLGLDAHAEEIFRLVLEKSTEHQQIIIDGDGITIYAKGEISHPASKLTFTPHLGEWERLK
VLVPNAETMLDAAIALDATIVLKGHRTKVYSGETVWQNMYGTPAMATGGMGDTLAGTICGLMAQTEKPITGTLAAVFLHS
YIGEILAKKRYVVLPTEIAEELPTYLKIFSETDEHA

Specific function: Unknown

COG id: COG0063

COG function: function code G; Predicted sugar kinase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 YjeF C-terminal domain [H]

Homologues:

Organism=Homo sapiens, GI119709830, Length=221, Percent_Identity=28.0542986425339, Blast_Score=72, Evalue=6e-13,
Organism=Escherichia coli, GI1790609, Length=258, Percent_Identity=30.6201550387597, Blast_Score=96, Evalue=2e-21,
Organism=Saccharomyces cerevisiae, GI6322698, Length=246, Percent_Identity=27.6422764227642, Blast_Score=72, Evalue=9e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017953
- InterPro:   IPR000631 [H]

Pfam domain/function: PF01256 Carb_kinase [H]

EC number: NA

Molecular weight: Translated: 29936; Mature: 29936

Theoretical pI: Translated: 5.36; Mature: 5.36

Prosite motif: PS01050 UPF0031_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKITPKAMCAWIPKREDETHKGDYGRVLIVAGNKQFGGAAIMAAEACVKSGAGLTTVAS
CCCCCHHHHHEECCCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCEEEEEC
DSVNRPALQTRIPECMFIDYENITSLSDQISQFDTILIGPGLGLDAHAEEIFRLVLEKST
CCCCCCHHHHCCCCEEEEEHHHHHHHHHHHHHCCEEEEECCCCCCHHHHHHHHHHHHCCC
EHQQIIIDGDGITIYAKGEISHPASKLTFTPHLGEWERLKVLVPNAETMLDAAIALDATI
CCCEEEEECCCEEEEECCCCCCCCHHEEECCCCCCCCEEEEECCCHHHHHHHHHHEEEEE
VLKGHRTKVYSGETVWQNMYGTPAMATGGMGDTLAGTICGLMAQTEKPITGTLAAVFLHS
EEECCCEEEECCCHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
YIGEILAKKRYVVLPTEIAEELPTYLKIFSETDEHA
HHHHHHHCCCEEEECHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MKKITPKAMCAWIPKREDETHKGDYGRVLIVAGNKQFGGAAIMAAEACVKSGAGLTTVAS
CCCCCHHHHHEECCCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCEEEEEC
DSVNRPALQTRIPECMFIDYENITSLSDQISQFDTILIGPGLGLDAHAEEIFRLVLEKST
CCCCCCHHHHCCCCEEEEEHHHHHHHHHHHHHCCEEEEECCCCCCHHHHHHHHHHHHCCC
EHQQIIIDGDGITIYAKGEISHPASKLTFTPHLGEWERLKVLVPNAETMLDAAIALDATI
CCCEEEEECCCEEEEECCCCCCCCHHEEECCCCCCCCEEEEECCCHHHHHHHHHHEEEEE
VLKGHRTKVYSGETVWQNMYGTPAMATGGMGDTLAGTICGLMAQTEKPITGTLAAVFLHS
EEECCCEEEECCCHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
YIGEILAKKRYVVLPTEIAEELPTYLKIFSETDEHA
HHHHHHHCCCEEEECHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8930919 [H]