| Definition | Listeria welshimeri serovar 6b str. SLCC5334, complete genome. |
|---|---|
| Accession | NC_008555 |
| Length | 2,814,130 |
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The map label for this gene is ytzB [H]
Identifier: 116873044
GI number: 116873044
Start: 1634961
End: 1635272
Strand: Direct
Name: ytzB [H]
Synonym: lwe1628
Alternate gene names: 116873044
Gene position: 1634961-1635272 (Clockwise)
Preceding gene: 116873035
Following gene: 116873054
Centisome position: 58.1
GC content: 37.18
Gene sequence:
>312_bases ATGAACTGGAAAGCTTTCATTGCAGGCGTTGGAGCAGGAGCAGCGGCTGGACACCTTGTTTATCATTATTTACTTAGCGA TAAAACAATTTCTGGAGACGTCATCTTAGAAAGAGTAAAAGATGCCTTCAAACAAGAAGGACCAATTGAAGGGTCATGGA TTCAATTAAAAAAACAACATTACAAAAAATTTGCGATTGACACTTTTGTCTATCACGGTGGCATCACTTGCATTCGTGAA GGTGAGAAAAAACAATTCGAATTTATCGCAGACGCTAACACAGGAACAATTATTGATGTTTATTTAGCATAA
Upstream 100 bases:
>100_bases TAATCAAAAATTTGTAGTATAATGATTAAAAGAGATGTTCGTAGTAACTTTTACTAAGGCATTTTTTAAAAAGAATAGCA AACACTAGGGAGGAAAAGCG
Downstream 100 bases:
>100_bases AAAATTAAAACGACTCCTAATTTTAGGGGTCGTTTCTATTTGCGCCAAAATAAGACTTAATCATATTTTGGCGCAAATTT TTATCGTATAAAACTATCAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 103; Mature: 103
Protein sequence:
>103_residues MNWKAFIAGVGAGAAAGHLVYHYLLSDKTISGDVILERVKDAFKQEGPIEGSWIQLKKQHYKKFAIDTFVYHGGITCIRE GEKKQFEFIADANTGTIIDVYLA
Sequences:
>Translated_103_residues MNWKAFIAGVGAGAAAGHLVYHYLLSDKTISGDVILERVKDAFKQEGPIEGSWIQLKKQHYKKFAIDTFVYHGGITCIRE GEKKQFEFIADANTGTIIDVYLA >Mature_103_residues MNWKAFIAGVGAGAAAGHLVYHYLLSDKTISGDVILERVKDAFKQEGPIEGSWIQLKKQHYKKFAIDTFVYHGGITCIRE GEKKQFEFIADANTGTIIDVYLA
Specific function: Unknown
COG id: COG5584
COG function: function code S; Predicted small secreted protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005075 [H]
Pfam domain/function: PF03413 PepSY [H]
EC number: NA
Molecular weight: Translated: 11464; Mature: 11464
Theoretical pI: Translated: 7.66; Mature: 7.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNWKAFIAGVGAGAAAGHLVYHYLLSDKTISGDVILERVKDAFKQEGPIEGSWIQLKKQH CCCEEEEEECCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHH YKKFAIDTFVYHGGITCIREGEKKQFEFIADANTGTIIDVYLA HHHHHHHHHHHCCCEEEEECCCCCEEEEEEECCCCCEEEEEEC >Mature Secondary Structure MNWKAFIAGVGAGAAAGHLVYHYLLSDKTISGDVILERVKDAFKQEGPIEGSWIQLKKQH CCCEEEEEECCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHH YKKFAIDTFVYHGGITCIREGEKKQFEFIADANTGTIIDVYLA HHHHHHHHHHHCCCEEEEECCCCCEEEEEEECCCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]