| Definition | Listeria welshimeri serovar 6b str. SLCC5334, complete genome. |
|---|---|
| Accession | NC_008555 |
| Length | 2,814,130 |
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The map label for this gene is 116872814
Identifier: 116872814
GI number: 116872814
Start: 1385307
End: 1385654
Strand: Direct
Name: 116872814
Synonym: lwe1398
Alternate gene names: NA
Gene position: 1385307-1385654 (Clockwise)
Preceding gene: 116872810
Following gene: 116872815
Centisome position: 49.23
GC content: 33.33
Gene sequence:
>348_bases ATGACAAAATGGAATGTCTATCTAACCAAAGGAGAATATGAGCCTTGGTGGTTTTTCGAGGAATGGGAAACTTCAATTCA AGCTGATTACTTTTTTGCAGAAAAAGAGGCAGCTTTTGCGAAATACCAAGAATTAGCAGAAGAATTAATGCAAAATTATC CTAACCATCAAACAAAAAAAGATTGTTTGTTAGCGGCTTGGAACGAAGAAGAAGTGGAATATTGCGAGGATTGTGAAGAT GATATTCAAACTTTTCATGGACTTATTTTATTTTTAAACGGGGAAGTATATCAACCGACACCTGAAGAAAAAGAAACCAT TTTTAAACATGTGTTAACTTTTTCTTAA
Upstream 100 bases:
>100_bases ATCTTTTTTTGACAATACTTTCAAAAATTTGCATTCCAGTAATTCAACAAACCTTATGCTATAATATGAGTATTATATTT AGTGTAGGGAGTTTTTTGAT
Downstream 100 bases:
>100_bases GACGATATAGAAATTAGCGATTTTTTGGAGGATTACTACATGCAGAAGAATGATGACTTATTAAGAGAACGACGGAAAGA TGAACATGTTGCTCTTGGAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 115; Mature: 114
Protein sequence:
>115_residues MTKWNVYLTKGEYEPWWFFEEWETSIQADYFFAEKEAAFAKYQELAEELMQNYPNHQTKKDCLLAAWNEEEVEYCEDCED DIQTFHGLILFLNGEVYQPTPEEKETIFKHVLTFS
Sequences:
>Translated_115_residues MTKWNVYLTKGEYEPWWFFEEWETSIQADYFFAEKEAAFAKYQELAEELMQNYPNHQTKKDCLLAAWNEEEVEYCEDCED DIQTFHGLILFLNGEVYQPTPEEKETIFKHVLTFS >Mature_114_residues TKWNVYLTKGEYEPWWFFEEWETSIQADYFFAEKEAAFAKYQELAEELMQNYPNHQTKKDCLLAAWNEEEVEYCEDCEDD IQTFHGLILFLNGEVYQPTPEEKETIFKHVLTFS
Specific function: Unknown
COG id: COG4699
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13900; Mature: 13769
Theoretical pI: Translated: 3.98; Mature: 3.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKWNVYLTKGEYEPWWFFEEWETSIQADYFFAEKEAAFAKYQELAEELMQNYPNHQTKK CCCEEEEEECCCCCCCEEHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC DCLLAAWNEEEVEYCEDCEDDIQTFHGLILFLNGEVYQPTPEEKETIFKHVLTFS CCEEEECCCHHHHHHHCCHHHHHHHHHEEEEECCCEECCCCCHHHHHHHHHHHCC >Mature Secondary Structure TKWNVYLTKGEYEPWWFFEEWETSIQADYFFAEKEAAFAKYQELAEELMQNYPNHQTKK CCEEEEEECCCCCCCEEHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC DCLLAAWNEEEVEYCEDCEDDIQTFHGLILFLNGEVYQPTPEEKETIFKHVLTFS CCEEEECCCHHHHHHHCCHHHHHHHHHEEEEECCCEECCCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA