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The map label for this gene is ynbB [H]

Identifier: 116872728

GI number: 116872728

Start: 1303889

End: 1305124

Strand: Direct

Name: ynbB [H]

Synonym: lwe1312

Alternate gene names: 116872728

Gene position: 1303889-1305124 (Clockwise)

Preceding gene: 116872727

Following gene: 116872729

Centisome position: 46.33

GC content: 37.46

Gene sequence:

>1236_bases
ATGACTGAAATACAAACAATAAGAAAAAAAGTCGAACTACAAATTGCTTCTTTGCAAAACGAAACAGAAGAAATTGCAGA
ATTTAACCAAGCGAAAGTGTTAGATGCTTTCCAAGAAAATAAAGTCAGTGATTTTCATTTTAATCCTTCTACTGGTTATG
GTTATGATGATGAAGGTAGAGATACATTAGAACGCGTCTATGCAGATGTATTTAAAACAGAAGCGGCTCTTGTTAGACCA
CAAATTATTTCGGGAACGCATGCTATTTCTACCGTTTTATTCGGCATTCTTCGCCCGGGAGATGACTTATTATACTTGAC
CGGACAACCCTATGACACATTGGAAGAGATTGTTGGTATAAGAAGCCAAGGTCAAGGATCACTTAAAGATTTTCAAATAG
GTTACGATGCTGTTCCATTAAAATCAAACGGAGAAGTAGATTTTATAGAAGCTGCAAAAAAAATTACCTCAAAAACGAAA
ATGGTTGGCATTCAACGATCAAGAGGTTATGCAGATCGGCCATCATTCACAGTCGAAAAAATAAAAGAAATGATTGCTTT
TGTAAAAAAAATCAATCCAAATATTATTATATTTGTAGATAATTGTTATGGTGAATTTGTAGAACGTCAAGAACCGCCTG
AAGTTGGTGCAGATATTATTGCTGGATCACTCATTAAAAATCCCGGTGGCGGTCTAGCGAAAACAGGTGGTTATATCGCT
GGCAAGGTTGAGCTAGTTGATTTATGTGGTTATCGTTTAACAACACCTGGAATAGGAAAAGAAGCAGGTGCGTCTCTTTA
TAGTTTGTTAGAAATGTACCAAGGGTTCTTTTTAGCGCCTCATGTAACTTCTCAAGCAATTAAAGGAGCGCGTTTTACAG
CTGCAATGTTAGCTGAGTTTAATGTAGAAGCGGATCCAGTATGGGATGCGCCGAGAACAGACTTAATCCAGAGTATATCC
TTCCATAACCAAGAAAAAATGGTCGCTTTTGCTCAAGCGATACAAAAAGCTTCTCCTGTAAATGCACACGTTTTGCCAAT
TGGTGCGTATATGCCAGGTTACGAAGATGACGTGATAATGGCAGCAGGAACGTTTATACAAGGTGCAAGCCTAGAACTTA
CAGCAGATGGTCCGATTAGAGAACCTTATCAACTCTATGTCCAAGGCGGTTTAACTTATGAACATGTAAAAATAGCTGTA
ACTAGAGCAATTCAAAATTCTTTACTCAAAAACTAA

Upstream 100 bases:

>100_bases
GCGCAAATAGGGCAACAAGCATGGTTGACAAAACTGGAATATATTGAAAACGAGGCATGCTACCGAATAGAAGGTTATCG
TCCTAGAAAGGAATCTACTA

Downstream 100 bases:

>100_bases
CATTTATTTTCAAAAAAAGTTTTATTTTTTTACTACGGTGATTTTCATCGTAGTTTTTTTGTTGCTAAATCGTTGGTATA
TATCGGTTTTGATACATGTT

Product: aluminum resistance protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 411; Mature: 410

Protein sequence:

>411_residues
MTEIQTIRKKVELQIASLQNETEEIAEFNQAKVLDAFQENKVSDFHFNPSTGYGYDDEGRDTLERVYADVFKTEAALVRP
QIISGTHAISTVLFGILRPGDDLLYLTGQPYDTLEEIVGIRSQGQGSLKDFQIGYDAVPLKSNGEVDFIEAAKKITSKTK
MVGIQRSRGYADRPSFTVEKIKEMIAFVKKINPNIIIFVDNCYGEFVERQEPPEVGADIIAGSLIKNPGGGLAKTGGYIA
GKVELVDLCGYRLTTPGIGKEAGASLYSLLEMYQGFFLAPHVTSQAIKGARFTAAMLAEFNVEADPVWDAPRTDLIQSIS
FHNQEKMVAFAQAIQKASPVNAHVLPIGAYMPGYEDDVIMAAGTFIQGASLELTADGPIREPYQLYVQGGLTYEHVKIAV
TRAIQNSLLKN

Sequences:

>Translated_411_residues
MTEIQTIRKKVELQIASLQNETEEIAEFNQAKVLDAFQENKVSDFHFNPSTGYGYDDEGRDTLERVYADVFKTEAALVRP
QIISGTHAISTVLFGILRPGDDLLYLTGQPYDTLEEIVGIRSQGQGSLKDFQIGYDAVPLKSNGEVDFIEAAKKITSKTK
MVGIQRSRGYADRPSFTVEKIKEMIAFVKKINPNIIIFVDNCYGEFVERQEPPEVGADIIAGSLIKNPGGGLAKTGGYIA
GKVELVDLCGYRLTTPGIGKEAGASLYSLLEMYQGFFLAPHVTSQAIKGARFTAAMLAEFNVEADPVWDAPRTDLIQSIS
FHNQEKMVAFAQAIQKASPVNAHVLPIGAYMPGYEDDVIMAAGTFIQGASLELTADGPIREPYQLYVQGGLTYEHVKIAV
TRAIQNSLLKN
>Mature_410_residues
TEIQTIRKKVELQIASLQNETEEIAEFNQAKVLDAFQENKVSDFHFNPSTGYGYDDEGRDTLERVYADVFKTEAALVRPQ
IISGTHAISTVLFGILRPGDDLLYLTGQPYDTLEEIVGIRSQGQGSLKDFQIGYDAVPLKSNGEVDFIEAAKKITSKTKM
VGIQRSRGYADRPSFTVEKIKEMIAFVKKINPNIIIFVDNCYGEFVERQEPPEVGADIIAGSLIKNPGGGLAKTGGYIAG
KVELVDLCGYRLTTPGIGKEAGASLYSLLEMYQGFFLAPHVTSQAIKGARFTAAMLAEFNVEADPVWDAPRTDLIQSISF
HNQEKMVAFAQAIQKASPVNAHVLPIGAYMPGYEDDVIMAAGTFIQGASLELTADGPIREPYQLYVQGGLTYEHVKIAVT
RAIQNSLLKN

Specific function: Unknown

COG id: COG4100

COG function: function code P; Cystathionine beta-lyase family protein involved in aluminum resistance

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009651
- InterPro:   IPR015424
- InterPro:   IPR015421 [H]

Pfam domain/function: PF06838 Alum_res [H]

EC number: NA

Molecular weight: Translated: 45077; Mature: 44946

Theoretical pI: Translated: 4.83; Mature: 4.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTEIQTIRKKVELQIASLQNETEEIAEFNQAKVLDAFQENKVSDFHFNPSTGYGYDDEGR
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCCCCCH
DTLERVYADVFKTEAALVRPQIISGTHAISTVLFGILRPGDDLLYLTGQPYDTLEEIVGI
HHHHHHHHHHHHHHHHHHCCHHHCCHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHCC
RSQGQGSLKDFQIGYDAVPLKSNGEVDFIEAAKKITSKTKMVGIQRSRGYADRPSFTVEK
CCCCCCCCCEEECCCCEECCCCCCCCHHHHHHHHHHHHHHHEEEHHCCCCCCCCCHHHHH
IKEMIAFVKKINPNIIIFVDNCYGEFVERQEPPEVGADIIAGSLIKNPGGGLAKTGGYIA
HHHHHHHHHHCCCCEEEEEECCHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCEEE
GKVELVDLCGYRLTTPGIGKEAGASLYSLLEMYQGFFLAPHVTSQAIKGARFTAAMLAEF
EEEEEEEECCCEECCCCCCHHHHHHHHHHHHHHCCEEECCCHHHHHHCCCHHHHHHHHHC
NVEADPVWDAPRTDLIQSISFHNQEKMVAFAQAIQKASPVNAHVLPIGAYMPGYEDDVIM
CCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCEEE
AAGTFIQGASLELTADGPIREPYQLYVQGGLTYEHVKIAVTRAIQNSLLKN
EECCEECCCEEEEECCCCCCCCEEEEEECCCEEHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TEIQTIRKKVELQIASLQNETEEIAEFNQAKVLDAFQENKVSDFHFNPSTGYGYDDEGR
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCCCCCH
DTLERVYADVFKTEAALVRPQIISGTHAISTVLFGILRPGDDLLYLTGQPYDTLEEIVGI
HHHHHHHHHHHHHHHHHHCCHHHCCHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHCC
RSQGQGSLKDFQIGYDAVPLKSNGEVDFIEAAKKITSKTKMVGIQRSRGYADRPSFTVEK
CCCCCCCCCEEECCCCEECCCCCCCCHHHHHHHHHHHHHHHEEEHHCCCCCCCCCHHHHH
IKEMIAFVKKINPNIIIFVDNCYGEFVERQEPPEVGADIIAGSLIKNPGGGLAKTGGYIA
HHHHHHHHHHCCCCEEEEEECCHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCEEE
GKVELVDLCGYRLTTPGIGKEAGASLYSLLEMYQGFFLAPHVTSQAIKGARFTAAMLAEF
EEEEEEEECCCEECCCCCCHHHHHHHHHHHHHHCCEEECCCHHHHHHCCCHHHHHHHHHC
NVEADPVWDAPRTDLIQSISFHNQEKMVAFAQAIQKASPVNAHVLPIGAYMPGYEDDVIM
CCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCEEE
AAGTFIQGASLELTADGPIREPYQLYVQGGLTYEHVKIAVTRAIQNSLLKN
EECCEECCCEEEEECCCCCCCCEEEEEECCCEEHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]