| Definition | Listeria welshimeri serovar 6b str. SLCC5334, complete genome. |
|---|---|
| Accession | NC_008555 |
| Length | 2,814,130 |
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The map label for this gene is yneT [H]
Identifier: 116872718
GI number: 116872718
Start: 1290942
End: 1291349
Strand: Direct
Name: yneT [H]
Synonym: lwe1302
Alternate gene names: 116872718
Gene position: 1290942-1291349 (Clockwise)
Preceding gene: 116872716
Following gene: 116872719
Centisome position: 45.87
GC content: 33.82
Gene sequence:
>408_bases ATGCAAAATCCAACAAAAGAAGAAATTAGGCAAATTTTAAAAGAGTCAAAAGTAATCGCAGTCGTTGGTTTGAGTGATAA GCCAGAACGCACAAGTTATCGTGTTAGCCAAATAATGCAACAAGCTGGATATAAAATTATCCCAGTAAACCCTAATGTAG ATGAAATTTTAGGCGAAAAAGCTGTAAAGAAATTAGCTGATATTAAAGAACATGTGGATATAGTTAATGTCTTCCGCCGT TCAGAATTTTTACCTGAAATAGCCAAAGAGTTTGACCAAATGGATGCAAATGTATTTTGGGCACAACTTGGCATTGTTAA TCAAGAAGCATTTGATTTTTTGACAGAAAAAGGATATCCTACTGTCATGGATTATTGCATTAAGGTTGCTTATCAAGAAA TGGACTAA
Upstream 100 bases:
>100_bases AGAATTGGCTAAATTATTGAGATGAAACAAGGGAGGAAGTTGAAAAAAACGTAAAAATAGCTTATGATTAGAAAGAATAG TATGGGGGGCGATTAGACTA
Downstream 100 bases:
>100_bases TGAAATACCATTTTTGAAGCAAGCAGGTTCTTATAGCAGAACCTGTTTTTTATATGAAACGAATTTTGTTACTAAAATAT CACTTTATTAATTAGCTAGT
Product: CoA-binding domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 135; Mature: 135
Protein sequence:
>135_residues MQNPTKEEIRQILKESKVIAVVGLSDKPERTSYRVSQIMQQAGYKIIPVNPNVDEILGEKAVKKLADIKEHVDIVNVFRR SEFLPEIAKEFDQMDANVFWAQLGIVNQEAFDFLTEKGYPTVMDYCIKVAYQEMD
Sequences:
>Translated_135_residues MQNPTKEEIRQILKESKVIAVVGLSDKPERTSYRVSQIMQQAGYKIIPVNPNVDEILGEKAVKKLADIKEHVDIVNVFRR SEFLPEIAKEFDQMDANVFWAQLGIVNQEAFDFLTEKGYPTVMDYCIKVAYQEMD >Mature_135_residues MQNPTKEEIRQILKESKVIAVVGLSDKPERTSYRVSQIMQQAGYKIIPVNPNVDEILGEKAVKKLADIKEHVDIVNVFRR SEFLPEIAKEFDQMDANVFWAQLGIVNQEAFDFLTEKGYPTVMDYCIKVAYQEMD
Specific function: Unknown
COG id: COG1832
COG function: function code R; Predicted CoA-binding protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI87081810, Length=121, Percent_Identity=42.9752066115703, Blast_Score=103, Evalue=3e-24,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003781 - InterPro: IPR016040 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15556; Mature: 15556
Theoretical pI: Translated: 4.69; Mature: 4.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQNPTKEEIRQILKESKVIAVVGLSDKPERTSYRVSQIMQQAGYKIIPVNPNVDEILGEK CCCCCHHHHHHHHHHCCEEEEEECCCCCCHHHHHHHHHHHHCCCEEEECCCCHHHHHHHH AVKKLADIKEHVDIVNVFRRSEFLPEIAKEFDQMDANVFWAQLGIVNQEAFDFLTEKGYP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCH TVMDYCIKVAYQEMD HHHHHHHHHHHHHCC >Mature Secondary Structure MQNPTKEEIRQILKESKVIAVVGLSDKPERTSYRVSQIMQQAGYKIIPVNPNVDEILGEK CCCCCHHHHHHHHHHCCEEEEEECCCCCCHHHHHHHHHHHHCCCEEEECCCCHHHHHHHH AVKKLADIKEHVDIVNVFRRSEFLPEIAKEFDQMDANVFWAQLGIVNQEAFDFLTEKGYP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCH TVMDYCIKVAYQEMD HHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8969507; 9384377 [H]