Click here to switch to the map view.

The map label for this gene is tig [H]

Identifier: 116872700

GI number: 116872700

Start: 1273417

End: 1274700

Strand: Direct

Name: tig [H]

Synonym: lwe1284

Alternate gene names: 116872700

Gene position: 1273417-1274700 (Clockwise)

Preceding gene: 116872699

Following gene: 116872701

Centisome position: 45.25

GC content: 36.99

Gene sequence:

>1284_bases
ATGTCAGTAAAATGGGAAAAACAAGAAGGTAATGTTGGAAAACTTACTTTTGACATTGAACAAGAAAAAGTAAAAGAAGG
TTTAGATAGAGCTTTCGTAAAAGTACGTAAAACTCTTAATGTACCTGGATTCCGTAAAGGGAAAGTTCCACGTCAAATTT
TTAATCAACGTTTCGGTGAAGAAGCGCTTTACCAAGATGCACTTGATATCTTGCTTCCAGAAGTATATTCTCAAGCAATT
GATGAAGCTGGAATTGATCCAGTTGATACTCCTCAAGTAAACATTGAGTCTATGGAAAAAGGTGAAACTTGGGTTCTAAC
AGCAGAAGTTACTGTAAAACCAGAAGTGAAACTTGGAGACTACAAAGGTCTTGAAGTAGAAAAACGCGAAACAGAACTTA
CAACAGAAGAGTTAGAAGCTGAATTAAAACAATTACAAGAACGTCAAGCAGAGTTAGTTGTTAAAGAAGATGCTCCAGCT
GAAAATGGCGATACTGTAATCCTTGATTTTGAAGGATTCAAAGACGGTGTAGCTTTTGAAGGCGGACAAGCTGAAAATCA
TTCTTTAGAACTTGGAAGCGGACAATTTATTCCTGGCTTTGAAGAAAAATTAGTTGGCTTAAAAGCTGGCGACGAAGCTG
ACATCGAGCTAACTTTCCCAGAAGAATATCATGCGGAAGATTTAGCTGGACAACCTGTAGTTTTCAAAGTGAAATTACAC
GAAATCAAAACAAAAGAAGTTCCTGCTCTTGACGATGAACTTGCAAAAGACATTGACGAAGAAGTAGAAACTCTAGATGA
ACTAAAAGAAAAAATTTCTAAACGTTTACAAGAAGCAAAAGAAGAGTCTGTTGCTCAAGCTAAACAAGAAGAAGTTATTG
CTAAAGCTGTTGAAAATGCAGAAGTGGACATTCCACACGCAATGGTTCATCATGAAGCTGATCATCTAATGAATCATTTT
GCACAAGATTTACAAGCACAAGGTCTAACTCCTGAATTATATTACCAATTCACTGGCCAAACAGAAGAAGCTATGCACGC
ACAAATGGAAACAGACGCTGAAAAACGCGTAAAAATGAATTTAGTGCTTGAAGCAATTGCTGAAGCTGAAAACATTGAGC
CAACTGAAGAAGCTATTGATGAAGAAATCTCCACATTAGCTGAAAAATATGGCATGGAAAAAGACGCTGTACGTGCTGCG
CTTGGAGATATGAGCGAACTTAAATCAGACCTTAAAATCCGTAAAGCTATTGATGTATTACTAGATAGCGCAGTGGAAAA
ATAA

Upstream 100 bases:

>100_bases
TTCAAGTCGGGGATATCTGTGTTATTATTAGTGAGTATGGCTGAAACTTGTCATGAGAGTAATTAAATTGAACTAAATAG
ATGATGGAGGGAATTATACC

Downstream 100 bases:

>100_bases
GCTGAATCTGTTGTAATAATTTCATTAAAAAATGGGGGGGGACATGAGTTATACTCGTGTCCTTCTGATTGTAGAAATTA
GGATACAGATGATTGGCATT

Product: trigger factor

Products: peptidylproline (w =0) [C]

Alternate protein names: TF [H]

Number of amino acids: Translated: 427; Mature: 426

Protein sequence:

>427_residues
MSVKWEKQEGNVGKLTFDIEQEKVKEGLDRAFVKVRKTLNVPGFRKGKVPRQIFNQRFGEEALYQDALDILLPEVYSQAI
DEAGIDPVDTPQVNIESMEKGETWVLTAEVTVKPEVKLGDYKGLEVEKRETELTTEELEAELKQLQERQAELVVKEDAPA
ENGDTVILDFEGFKDGVAFEGGQAENHSLELGSGQFIPGFEEKLVGLKAGDEADIELTFPEEYHAEDLAGQPVVFKVKLH
EIKTKEVPALDDELAKDIDEEVETLDELKEKISKRLQEAKEESVAQAKQEEVIAKAVENAEVDIPHAMVHHEADHLMNHF
AQDLQAQGLTPELYYQFTGQTEEAMHAQMETDAEKRVKMNLVLEAIAEAENIEPTEEAIDEEISTLAEKYGMEKDAVRAA
LGDMSELKSDLKIRKAIDVLLDSAVEK

Sequences:

>Translated_427_residues
MSVKWEKQEGNVGKLTFDIEQEKVKEGLDRAFVKVRKTLNVPGFRKGKVPRQIFNQRFGEEALYQDALDILLPEVYSQAI
DEAGIDPVDTPQVNIESMEKGETWVLTAEVTVKPEVKLGDYKGLEVEKRETELTTEELEAELKQLQERQAELVVKEDAPA
ENGDTVILDFEGFKDGVAFEGGQAENHSLELGSGQFIPGFEEKLVGLKAGDEADIELTFPEEYHAEDLAGQPVVFKVKLH
EIKTKEVPALDDELAKDIDEEVETLDELKEKISKRLQEAKEESVAQAKQEEVIAKAVENAEVDIPHAMVHHEADHLMNHF
AQDLQAQGLTPELYYQFTGQTEEAMHAQMETDAEKRVKMNLVLEAIAEAENIEPTEEAIDEEISTLAEKYGMEKDAVRAA
LGDMSELKSDLKIRKAIDVLLDSAVEK
>Mature_426_residues
SVKWEKQEGNVGKLTFDIEQEKVKEGLDRAFVKVRKTLNVPGFRKGKVPRQIFNQRFGEEALYQDALDILLPEVYSQAID
EAGIDPVDTPQVNIESMEKGETWVLTAEVTVKPEVKLGDYKGLEVEKRETELTTEELEAELKQLQERQAELVVKEDAPAE
NGDTVILDFEGFKDGVAFEGGQAENHSLELGSGQFIPGFEEKLVGLKAGDEADIELTFPEEYHAEDLAGQPVVFKVKLHE
IKTKEVPALDDELAKDIDEEVETLDELKEKISKRLQEAKEESVAQAKQEEVIAKAVENAEVDIPHAMVHHEADHLMNHFA
QDLQAQGLTPELYYQFTGQTEEAMHAQMETDAEKRVKMNLVLEAIAEAENIEPTEEAIDEEISTLAEKYGMEKDAVRAAL
GDMSELKSDLKIRKAIDVLLDSAVEK

Specific function: Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation [H]

COG id: COG0544

COG function: function code O; FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PPIase FKBP-type domain [H]

Homologues:

Organism=Escherichia coli, GI1786640, Length=393, Percent_Identity=31.0432569974555, Blast_Score=180, Evalue=1e-46,

Paralogues:

None

Copy number: 1070 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 300 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). 500 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). 340 Molecules/Cell In: Growth-Phase, Mini

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001179
- InterPro:   IPR005215
- InterPro:   IPR008880
- InterPro:   IPR008881 [H]

Pfam domain/function: PF00254 FKBP_C; PF05698 Trigger_C; PF05697 Trigger_N [H]

EC number: NA

Molecular weight: Translated: 47886; Mature: 47755

Theoretical pI: Translated: 4.18; Mature: 4.18

Prosite motif: PS50059 FKBP_PPIASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVKWEKQEGNVGKLTFDIEQEKVKEGLDRAFVKVRKTLNVPGFRKGKVPRQIFNQRFGE
CCCCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCH
EALYQDALDILLPEVYSQAIDEAGIDPVDTPQVNIESMEKGETWVLTAEVTVKPEVKLGD
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCCCCEEEEEEEEEECCCEEECC
YKGLEVEKRETELTTEELEAELKQLQERQAELVVKEDAPAENGDTVILDFEGFKDGVAFE
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCEEEEEECCCCCCCCCC
GGQAENHSLELGSGQFIPGFEEKLVGLKAGDEADIELTFPEEYHAEDLAGQPVVFKVKLH
CCCCCCCCEECCCCCCCCCHHHHHCCCCCCCCCCEEEECCHHHCHHHCCCCCEEEEEEEE
EIKTKEVPALDDELAKDIDEEVETLDELKEKISKRLQEAKEESVAQAKQEEVIAKAVENA
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
EVDIPHAMVHHEADHLMNHFAQDLQAQGLTPELYYQFTGQTEEAMHAQMETDAEKRVKMN
CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHEEEECCCCHHHHHHHHHCCHHHHHHHH
LVLEAIAEAENIEPTEEAIDEEISTLAEKYGMEKDAVRAALGDMSELKSDLKIRKAIDVL
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHHHHH
LDSAVEK
HHHHHCC
>Mature Secondary Structure 
SVKWEKQEGNVGKLTFDIEQEKVKEGLDRAFVKVRKTLNVPGFRKGKVPRQIFNQRFGE
CCCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCH
EALYQDALDILLPEVYSQAIDEAGIDPVDTPQVNIESMEKGETWVLTAEVTVKPEVKLGD
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCCCCEEEEEEEEEECCCEEECC
YKGLEVEKRETELTTEELEAELKQLQERQAELVVKEDAPAENGDTVILDFEGFKDGVAFE
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCEEEEEECCCCCCCCCC
GGQAENHSLELGSGQFIPGFEEKLVGLKAGDEADIELTFPEEYHAEDLAGQPVVFKVKLH
CCCCCCCCEECCCCCCCCCHHHHHCCCCCCCCCCEEEECCHHHCHHHCCCCCEEEEEEEE
EIKTKEVPALDDELAKDIDEEVETLDELKEKISKRLQEAKEESVAQAKQEEVIAKAVENA
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
EVDIPHAMVHHEADHLMNHFAQDLQAQGLTPELYYQFTGQTEEAMHAQMETDAEKRVKMN
CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHEEEECCCCHHHHHHHHHCCHHHHHHHH
LVLEAIAEAENIEPTEEAIDEEISTLAEKYGMEKDAVRAALGDMSELKSDLKIRKAIDVL
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHHHHH
LDSAVEK
HHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: peptidylproline (w =180) [C]

Specific reaction: peptidylproline (w =180) = peptidylproline (w =0) [C]

General reaction: Isomerases; cis-trans-Isomerases [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11679669 [H]