| Definition | Listeria welshimeri serovar 6b str. SLCC5334, complete genome. |
|---|---|
| Accession | NC_008555 |
| Length | 2,814,130 |
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The map label for this gene is 116872646
Identifier: 116872646
GI number: 116872646
Start: 1231848
End: 1232171
Strand: Direct
Name: 116872646
Synonym: lwe1230
Alternate gene names: NA
Gene position: 1231848-1232171 (Clockwise)
Preceding gene: 116872645
Following gene: 116872647
Centisome position: 43.77
GC content: 32.72
Gene sequence:
>324_bases ATGAACTTAAAAGATATTTTAAACGAAACAGGACTACCTGTCTCATACGACCACTTCACCGAAACGGACACTACACCAAT TCCTGCTCTTCCGTATCTAACATATAACGAGTCTGACAGTGTCAACTTAATGGCTGATAACATTGTATTGAAAAAAATAT CAAATTACACCATCGAACTGTATACAGAATATAAAACACCATCAACAGAATTACTTTTAGAAAATGCTTTAATGGCAAAC AAACTGCCTTTCAATTCCTCTCAAACAGAATGGATAGAGGATGAAAAAATGTATGTAAAATATTATTATGTGAGGATGAT TTAA
Upstream 100 bases:
>100_bases AACGAGGCGGAGGAAGAGTTAAAGCCTACAAACATATTGAACCAGTAGAACAAGAAGCAATACAAGAATACGTTCGAGAA GCGGAAAGGGCGTTGAGACA
Downstream 100 bases:
>100_bases ATGCCCGAAACACAAGAAAACAAAGTATTATTTGGATTAGAAAATGTACATTATGCAACGTATACGGAGGCAGATGGAAA AATTACTTATGCGAAGCCAA
Product: hypothetical protein
Products: NA
Alternate protein names: Phage Related Protein
Number of amino acids: Translated: 107; Mature: 107
Protein sequence:
>107_residues MNLKDILNETGLPVSYDHFTETDTTPIPALPYLTYNESDSVNLMADNIVLKKISNYTIELYTEYKTPSTELLLENALMAN KLPFNSSQTEWIEDEKMYVKYYYVRMI
Sequences:
>Translated_107_residues MNLKDILNETGLPVSYDHFTETDTTPIPALPYLTYNESDSVNLMADNIVLKKISNYTIELYTEYKTPSTELLLENALMAN KLPFNSSQTEWIEDEKMYVKYYYVRMI >Mature_107_residues MNLKDILNETGLPVSYDHFTETDTTPIPALPYLTYNESDSVNLMADNIVLKKISNYTIELYTEYKTPSTELLLENALMAN KLPFNSSQTEWIEDEKMYVKYYYVRMI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12518; Mature: 12518
Theoretical pI: Translated: 4.16; Mature: 4.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.7 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLKDILNETGLPVSYDHFTETDTTPIPALPYLTYNESDSVNLMADNIVLKKISNYTIEL CCHHHHHHCCCCCEEECCCCCCCCCCCCCCCEEEECCCCCEEEEECCEEEEECCCCEEEE YTEYKTPSTELLLENALMANKLPFNSSQTEWIEDEKMYVKYYYVRMI EEECCCCCHHHHHHHHHHHCCCCCCCCCCCEECCCEEEEEEEEEEEC >Mature Secondary Structure MNLKDILNETGLPVSYDHFTETDTTPIPALPYLTYNESDSVNLMADNIVLKKISNYTIEL CCHHHHHHCCCCCEEECCCCCCCCCCCCCCCEEEECCCCCEEEEECCEEEEECCCCEEEE YTEYKTPSTELLLENALMANKLPFNSSQTEWIEDEKMYVKYYYVRMI EEECCCCCHHHHHHHHHHHCCCCCCCCCCCEECCCEEEEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA