| Definition | Listeria welshimeri serovar 6b str. SLCC5334, complete genome. |
|---|---|
| Accession | NC_008555 |
| Length | 2,814,130 |
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The map label for this gene is 116872645
Identifier: 116872645
GI number: 116872645
Start: 1231498
End: 1231851
Strand: Direct
Name: 116872645
Synonym: lwe1229
Alternate gene names: NA
Gene position: 1231498-1231851 (Clockwise)
Preceding gene: 116872644
Following gene: 116872646
Centisome position: 43.76
GC content: 37.85
Gene sequence:
>354_bases TTGAAGATAAAAGGATTAAATAACGCCATCGCTGACGTATTGAAAACATACACTAAAGATATTGAACAAGAACTAGAAAT GATTCAAAAAAAAGTCGCAACTAATGCTACGAAAAAACTACAACAAAGAAGCCCGGTAAAAAAAGGTAGATACGCGAGAG GGTGGAAAGCTAAAAAGACTTCCACTGGATATGTTATTTATAACGCCTCTGACCCTGGTAAAACTCATCTTTTAGAAAAC GGTCATGCTAAACGAGGCGGAGGAAGAGTTAAAGCCTACAAACATATTGAACCAGTAGAACAAGAAGCAATACAAGAATA CGTTCGAGAAGCGGAAAGGGCGTTGAGACAATGA
Upstream 100 bases:
>100_bases TTTTGAAAACAAGCGGTATGTAATTATTCGAACATATAGCGTTGATTCAGAGAGACTAGAACTCACTTGTGAGCGTGATT TAGGAGAGCGGTGATTTGAC
Downstream 100 bases:
>100_bases ACTTAAAAGATATTTTAAACGAAACAGGACTACCTGTCTCATACGACCACTTCACCGAAACGGACACTACACCAATTCCT GCTCTTCCGTATCTAACATA
Product: hypothetical protein
Products: NA
Alternate protein names: Prophage Protein; Phage Related Protein
Number of amino acids: Translated: 117; Mature: 117
Protein sequence:
>117_residues MKIKGLNNAIADVLKTYTKDIEQELEMIQKKVATNATKKLQQRSPVKKGRYARGWKAKKTSTGYVIYNASDPGKTHLLEN GHAKRGGGRVKAYKHIEPVEQEAIQEYVREAERALRQ
Sequences:
>Translated_117_residues MKIKGLNNAIADVLKTYTKDIEQELEMIQKKVATNATKKLQQRSPVKKGRYARGWKAKKTSTGYVIYNASDPGKTHLLEN GHAKRGGGRVKAYKHIEPVEQEAIQEYVREAERALRQ >Mature_117_residues MKIKGLNNAIADVLKTYTKDIEQELEMIQKKVATNATKKLQQRSPVKKGRYARGWKAKKTSTGYVIYNASDPGKTHLLEN GHAKRGGGRVKAYKHIEPVEQEAIQEYVREAERALRQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13294; Mature: 13294
Theoretical pI: Translated: 10.58; Mature: 10.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIKGLNNAIADVLKTYTKDIEQELEMIQKKVATNATKKLQQRSPVKKGRYARGWKAKKT CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC STGYVIYNASDPGKTHLLENGHAKRGGGRVKAYKHIEPVEQEAIQEYVREAERALRQ CCCEEEEECCCCCCHHHHCCCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MKIKGLNNAIADVLKTYTKDIEQELEMIQKKVATNATKKLQQRSPVKKGRYARGWKAKKT CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC STGYVIYNASDPGKTHLLENGHAKRGGGRVKAYKHIEPVEQEAIQEYVREAERALRQ CCCEEEEECCCCCCHHHHCCCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA