Definition Listeria welshimeri serovar 6b str. SLCC5334, complete genome.
Accession NC_008555
Length 2,814,130

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The map label for this gene is 116872623

Identifier: 116872623

GI number: 116872623

Start: 1215460

End: 1215981

Strand: Direct

Name: 116872623

Synonym: lwe1207

Alternate gene names: NA

Gene position: 1215460-1215981 (Clockwise)

Preceding gene: 116872622

Following gene: 116872624

Centisome position: 43.19

GC content: 37.16

Gene sequence:

>522_bases
ATGAAAAAAGAAGATATAACATTTCTAAATGAGTTGCAGCAAGAACTAAACACACAATCAAACTGTGGGAACGCATCGCC
TGTGTTTTGGGTAATACGCCAGTGCGAAAAACAAATTACTGATTCAGATTTCGGAGAAGAGACGCTATATATTCACAGTG
ATGGCGATTATTTGGAATTTGAAAAACTTGATGAACTTCTAGAATTTTTAAGCGAGGGTTCAGAATTTGATGCAGTAAAG
GATTGCGAAACGCTGGATGATGCTTTTGACATCCTTCTAAACGATTTTAACGAAGATGGTTACTTCGCAAGATTCTCAGC
TACAGAAGTAGCCGTAGTAAAACAAGACACATTTTTCATTACTCATAAGGAAGCTTTAGAACACATCAAAAAAAATAGGC
GTCATTATAATTCAACTGTACACACATATGCAATGACAGCGTGGCGTTCACCAGAGGTCGAAAAACTCTGGGAGATTCTT
AGAGAAGCAGATTTTAATAAATTGTTGGAGGTGGCGGAATAA

Upstream 100 bases:

>100_bases
AGCCTAGTTATGTGTTGAACCAAAATGGCAGTTCGTTAGTAAAGCATATGGAAGTTATCGGCAACATACATGAAAATCCG
GAATTATTGGAGGGAATGGA

Downstream 100 bases:

>100_bases
TGTGTGAGTATTGCGAGGAAAATTTCAGAAAACGTGGCGAAATCACAACAGATGAAGGTCATGAAATACGTATTGACTGG
GATAATGATTTAGCAATACT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 173; Mature: 173

Protein sequence:

>173_residues
MKKEDITFLNELQQELNTQSNCGNASPVFWVIRQCEKQITDSDFGEETLYIHSDGDYLEFEKLDELLEFLSEGSEFDAVK
DCETLDDAFDILLNDFNEDGYFARFSATEVAVVKQDTFFITHKEALEHIKKNRRHYNSTVHTYAMTAWRSPEVEKLWEIL
READFNKLLEVAE

Sequences:

>Translated_173_residues
MKKEDITFLNELQQELNTQSNCGNASPVFWVIRQCEKQITDSDFGEETLYIHSDGDYLEFEKLDELLEFLSEGSEFDAVK
DCETLDDAFDILLNDFNEDGYFARFSATEVAVVKQDTFFITHKEALEHIKKNRRHYNSTVHTYAMTAWRSPEVEKLWEIL
READFNKLLEVAE
>Mature_173_residues
MKKEDITFLNELQQELNTQSNCGNASPVFWVIRQCEKQITDSDFGEETLYIHSDGDYLEFEKLDELLEFLSEGSEFDAVK
DCETLDDAFDILLNDFNEDGYFARFSATEVAVVKQDTFFITHKEALEHIKKNRRHYNSTVHTYAMTAWRSPEVEKLWEIL
READFNKLLEVAE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20281; Mature: 20281

Theoretical pI: Translated: 4.17; Mature: 4.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKEDITFLNELQQELNTQSNCGNASPVFWVIRQCEKQITDSDFGEETLYIHSDGDYLEF
CCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCEEEEECCCCEECH
EKLDELLEFLSEGSEFDAVKDCETLDDAFDILLNDFNEDGYFARFSATEVAVVKQDTFFI
HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCEEEEEECCEEEE
THKEALEHIKKNRRHYNSTVHTYAMTAWRSPEVEKLWEILREADFNKLLEVAE
EHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHCC
>Mature Secondary Structure
MKKEDITFLNELQQELNTQSNCGNASPVFWVIRQCEKQITDSDFGEETLYIHSDGDYLEF
CCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCEEEEECCCCEECH
EKLDELLEFLSEGSEFDAVKDCETLDDAFDILLNDFNEDGYFARFSATEVAVVKQDTFFI
HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCEEEEEECCEEEE
THKEALEHIKKNRRHYNSTVHTYAMTAWRSPEVEKLWEILREADFNKLLEVAE
EHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA