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The map label for this gene is ccmL [H]

Identifier: 116872537

GI number: 116872537

Start: 1133319

End: 1133582

Strand: Direct

Name: ccmL [H]

Synonym: lwe1121

Alternate gene names: 116872537

Gene position: 1133319-1133582 (Clockwise)

Preceding gene: 116872536

Following gene: 116872538

Centisome position: 40.27

GC content: 37.12

Gene sequence:

>264_bases
ATGTTTATGGCAAAAATTACTGGAAGTGTAGTTTCTACAAAAAAAGAAGACTCACTTACTGGTAAAAAAATAATGATTGT
ACAACCAGTTGATGCAAATGGTGAAAATGTTCGTTCAGAAGAAGTAGCTTGTGACTCTGTTGGCGCGGGCATTGGAGAGT
ATGTACTTGTGGCTCGCGGAAATGCAGCTAGAAGTGTTTTTTCAGAACCAAATAGTGCGATTGATTCGGCAATTATTGCA
ATTGTCGATAGTTTTGATAAGTAA

Upstream 100 bases:

>100_bases
GGGAGTACACTTTGCAAATATAAAAAGCAGCTTATTACACCGCTTGCAAATGAATATTTAAGTAAAAATAATATTGCAGT
GCGGGAAAGGCAGTGACGTT

Downstream 100 bases:

>100_bases
GGAGTGAATAACTCATGAGTATTTATACAAAAACCGGCGATAAGGGAACAACAGCACTATTTGATGGGAATCGTGTAAAA
AAATATGATGACCGTGTCGA

Product: ethanolamine and carbon dioxide metabolism

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 87; Mature: 87

Protein sequence:

>87_residues
MFMAKITGSVVSTKKEDSLTGKKIMIVQPVDANGENVRSEEVACDSVGAGIGEYVLVARGNAARSVFSEPNSAIDSAIIA
IVDSFDK

Sequences:

>Translated_87_residues
MFMAKITGSVVSTKKEDSLTGKKIMIVQPVDANGENVRSEEVACDSVGAGIGEYVLVARGNAARSVFSEPNSAIDSAIIA
IVDSFDK
>Mature_87_residues
MFMAKITGSVVSTKKEDSLTGKKIMIVQPVDANGENVRSEEVACDSVGAGIGEYVLVARGNAARSVFSEPNSAIDSAIIA
IVDSFDK

Specific function: May Be Involved In The Formation Of A Specific Microcompartiment In The Cell In Which The Metabolism Of Potentially Toxic By-Products Takes Place. [C]

COG id: COG4576

COG function: function code QC; Carbon dioxide concentrating mechanism/carboxysome shell protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli and S.typhimurium CchB [H]

Homologues:

Organism=Escherichia coli, GI1788798, Length=83, Percent_Identity=36.144578313253, Blast_Score=60, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004992
- ProDom:   PD012510 [H]

Pfam domain/function: PF03319 EutN_CcmL [H]

EC number: NA

Molecular weight: Translated: 9107; Mature: 9107

Theoretical pI: Translated: 4.50; Mature: 4.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFMAKITGSVVSTKKEDSLTGKKIMIVQPVDANGENVRSEEVACDSVGAGIGEYVLVARG
CEEECCCCCHHCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCHHHCCCCCCCEEEEECC
NAARSVFSEPNSAIDSAIIAIVDSFDK
CCHHHHHCCCCCHHHHHHHHHHHCCCC
>Mature Secondary Structure
MFMAKITGSVVSTKKEDSLTGKKIMIVQPVDANGENVRSEEVACDSVGAGIGEYVLVARG
CEEECCCCCHHCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCHHHCCCCCCCEEEEECC
NAARSVFSEPNSAIDSAIIAIVDSFDK
CCHHHHHCCCCCHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8491708 [H]