| Definition | Listeria welshimeri serovar 6b str. SLCC5334, complete genome. |
|---|---|
| Accession | NC_008555 |
| Length | 2,814,130 |
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The map label for this gene is 116872536
Identifier: 116872536
GI number: 116872536
Start: 1132835
End: 1133314
Strand: Direct
Name: 116872536
Synonym: lwe1120
Alternate gene names: NA
Gene position: 1132835-1133314 (Clockwise)
Preceding gene: 116872535
Following gene: 116872537
Centisome position: 40.26
GC content: 38.54
Gene sequence:
>480_bases ATGATAGAGAAATTAGTGAAAATCATTGTCCAACGCTTGAAACTTCGTGCTGCAAATAAAACTTCTATAGCTGTTAGCAA AATGCCACGCGATCCAGTTGCCATTTTTATGGAAAGTGGGACGGTTCGTTTGACGCAGGTAAACAAACATTTTCTTGAGC GGATACTAAGCGGAAATCGAGCAGAATCACTCTCTATTTGGTTTGAAAAAGCAGCAGAATATGGGGTGGATATTGAACTG GAACTGTATGATCACGGTGAACCTTGGCTAAATTATGAAATATTAAGTCAGTTAGACTTTCCAGTATTTACAAGTACTGG TGAGAGACTCTTTTATTCAAGTGGACGAGTGATTTGTTACGGGGATAGTGCATTAATCCCAAGCGGGAGTACACTTTGCA AATATAAAAAGCAGCTTATTACACCGCTTGCAAATGAATATTTAAGTAAAAATAATATTGCAGTGCGGGAAAGGCAGTGA
Upstream 100 bases:
>100_bases ATACGTTTGAAAGCTATTTGAAGATGCCTGTTTTTCAACCTAATTATCCGCAGTATGTCACGCCTCTTGGTATTGCTATG AGTTCAGGGAGCGGAAATTT
Downstream 100 bases:
>100_bases CGTTATGTTTATGGCAAAAATTACTGGAAGTGTAGTTTCTACAAAAAAAGAAGACTCACTTACTGGTAAAAAAATAATGA TTGTACAACCAGTTGATGCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 159; Mature: 159
Protein sequence:
>159_residues MIEKLVKIIVQRLKLRAANKTSIAVSKMPRDPVAIFMESGTVRLTQVNKHFLERILSGNRAESLSIWFEKAAEYGVDIEL ELYDHGEPWLNYEILSQLDFPVFTSTGERLFYSSGRVICYGDSALIPSGSTLCKYKKQLITPLANEYLSKNNIAVRERQ
Sequences:
>Translated_159_residues MIEKLVKIIVQRLKLRAANKTSIAVSKMPRDPVAIFMESGTVRLTQVNKHFLERILSGNRAESLSIWFEKAAEYGVDIEL ELYDHGEPWLNYEILSQLDFPVFTSTGERLFYSSGRVICYGDSALIPSGSTLCKYKKQLITPLANEYLSKNNIAVRERQ >Mature_159_residues MIEKLVKIIVQRLKLRAANKTSIAVSKMPRDPVAIFMESGTVRLTQVNKHFLERILSGNRAESLSIWFEKAAEYGVDIEL ELYDHGEPWLNYEILSQLDFPVFTSTGERLFYSSGRVICYGDSALIPSGSTLCKYKKQLITPLANEYLSKNNIAVRERQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18131; Mature: 18131
Theoretical pI: Translated: 9.03; Mature: 9.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIEKLVKIIVQRLKLRAANKTSIAVSKMPRDPVAIFMESGTVRLTQVNKHFLERILSGNR CHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCEEEEEECCCEEEEHHHHHHHHHHHCCCC AESLSIWFEKAAEYGVDIELELYDHGEPWLNYEILSQLDFPVFTSTGERLFYSSGRVICY CCHHHHHHHHHHHCCCCEEEEEEECCCCCCCHHHHHHCCCCEEECCCCEEEECCCCEEEE GDSALIPSGSTLCKYKKQLITPLANEYLSKNNIAVRERQ ECCEECCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECC >Mature Secondary Structure MIEKLVKIIVQRLKLRAANKTSIAVSKMPRDPVAIFMESGTVRLTQVNKHFLERILSGNR CHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCEEEEEECCCEEEEHHHHHHHHHHHCCCC AESLSIWFEKAAEYGVDIELELYDHGEPWLNYEILSQLDFPVFTSTGERLFYSSGRVICY CCHHHHHHHHHHHCCCCEEEEEEECCCCCCCHHHHHHCCCCEEECCCCEEEECCCCEEEE GDSALIPSGSTLCKYKKQLITPLANEYLSKNNIAVRERQ ECCEECCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA