| Definition | Listeria welshimeri serovar 6b str. SLCC5334, complete genome. |
|---|---|
| Accession | NC_008555 |
| Length | 2,814,130 |
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The map label for this gene is 116872493
Identifier: 116872493
GI number: 116872493
Start: 1098479
End: 1098916
Strand: Direct
Name: 116872493
Synonym: lwe1077
Alternate gene names: NA
Gene position: 1098479-1098916 (Clockwise)
Preceding gene: 116872492
Following gene: 116872494
Centisome position: 39.03
GC content: 33.11
Gene sequence:
>438_bases ATGAAATATGAAGCTGATTTTATAAAAAGATTCCAACCATTAATAGAAGAATATAAGTTGAATTATAAAGTTATATCTGA AGAGGAGCTAGCACTTTTTGGTTCTAATTTTGCGCTTGTTTTTTTGATTCATTTTGATGAGGTCTCTTTGGATTATGTAA GCCGTGATAAAGATAATTTGCTTGTTAGTTTTGATGTATGGTCTTATTTTTTACATGTCTTTGATGATAAAGATAGGGAG AATTTGCCAAAATATAATTCTGTGCAGGAGAGGGTTGATGTCTCATTTTTAATACTTGCAAGAGGTCTTCCGCGTCATTG GAGCAGTGTGCTTAATGGAGATGACAAGTGGTTGGAAGATTATGAGCAATATGAATTGGCCGGTGTTCCTAGAGAAGTAA TCGGGGATTTGAAGGATAGTTTGAGTTTATATATTTAA
Upstream 100 bases:
>100_bases AAAGAGAATAAGTTTTATAATGAGCCGAGAGCTATTAACAAAGACGAGTATTCAGCCTATAAAACTAATATTAATGGCAA AAAAATTGAAGGATTTCAAA
Downstream 100 bases:
>100_bases CCAAGAAATGTTGAGAATTTAACAGCAAAGAGGAGTCCAACCATGAAATTGGATGATAATTCAAAAGAAATAATCCTTAA AAAAAGTAAATTTTTGCTCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 145; Mature: 145
Protein sequence:
>145_residues MKYEADFIKRFQPLIEEYKLNYKVISEEELALFGSNFALVFLIHFDEVSLDYVSRDKDNLLVSFDVWSYFLHVFDDKDRE NLPKYNSVQERVDVSFLILARGLPRHWSSVLNGDDKWLEDYEQYELAGVPREVIGDLKDSLSLYI
Sequences:
>Translated_145_residues MKYEADFIKRFQPLIEEYKLNYKVISEEELALFGSNFALVFLIHFDEVSLDYVSRDKDNLLVSFDVWSYFLHVFDDKDRE NLPKYNSVQERVDVSFLILARGLPRHWSSVLNGDDKWLEDYEQYELAGVPREVIGDLKDSLSLYI >Mature_145_residues MKYEADFIKRFQPLIEEYKLNYKVISEEELALFGSNFALVFLIHFDEVSLDYVSRDKDNLLVSFDVWSYFLHVFDDKDRE NLPKYNSVQERVDVSFLILARGLPRHWSSVLNGDDKWLEDYEQYELAGVPREVIGDLKDSLSLYI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17199; Mature: 17199
Theoretical pI: Translated: 4.33; Mature: 4.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 0.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKYEADFIKRFQPLIEEYKLNYKVISEEELALFGSNFALVFLIHFDEVSLDYVSRDKDNL CCCCHHHHHHHHHHHHHHCCCEEEECCCHHEEECCCEEEEEEEEECCCCHHHHCCCCCCE LVSFDVWSYFLHVFDDKDRENLPKYNSVQERVDVSFLILARGLPRHWSSVLNGDDKWLED EEEEHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHEECCCCCHHHHHHHCCCHHHHHH YEQYELAGVPREVIGDLKDSLSLYI HHHHHHCCCCHHHHHHHHHHHHCCC >Mature Secondary Structure MKYEADFIKRFQPLIEEYKLNYKVISEEELALFGSNFALVFLIHFDEVSLDYVSRDKDNL CCCCHHHHHHHHHHHHHHCCCEEEECCCHHEEECCCEEEEEEEEECCCCHHHHCCCCCCE LVSFDVWSYFLHVFDDKDRENLPKYNSVQERVDVSFLILARGLPRHWSSVLNGDDKWLED EEEEHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHEECCCCCHHHHHHHCCCHHHHHH YEQYELAGVPREVIGDLKDSLSLYI HHHHHHCCCCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA