Definition Listeria welshimeri serovar 6b str. SLCC5334, complete genome.
Accession NC_008555
Length 2,814,130

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The map label for this gene is 116872492

Identifier: 116872492

GI number: 116872492

Start: 1098025

End: 1098489

Strand: Direct

Name: 116872492

Synonym: lwe1076

Alternate gene names: NA

Gene position: 1098025-1098489 (Clockwise)

Preceding gene: 116872491

Following gene: 116872493

Centisome position: 39.02

GC content: 27.1

Gene sequence:

>465_bases
ATGGAGTTTAAGCACGAAGTAGAAAATAACTTTGCGGATATAATTCAAGAATATCAATTTAACTTAATTAAAGTAAATGA
AGACGAAATAATGTTGTTACATCCTAATTATGCTCTAACTATTTGGAAAAGTAGAGAAGGTATTGATATTTATTATCTGT
TTCTTCACAGCTTAGAAAAAGTGAAAATAACCAATTTCTTATTTTCAAATTATGAAAAAGAATTATTAGCTAATATCATT
CCTGCAAATAATTTGGTCGACAAAATTTCTAATAGCTTACTTATTCATGCGAGAGGTTTAAGTAAATATTTCCCTGAATT
GCTATCTGGTCAAAATGACTGGATAAAGGATTTTAAAGAGAATAAGTTTTATAATGAGCCGAGAGCTATTAACAAAGACG
AGTATTCAGCCTATAAAACTAATATTAATGGCAAAAAAATTGAAGGATTTCAAAATGAAATATGA

Upstream 100 bases:

>100_bases
TATTTGGTAAAGAATATTTTTATTTAAAAGAACATGGTTATGAATTTGATTCTAAAACATCTGAAATGAAATATAAAAAA
TAACAGAGTTGGTGAAATTT

Downstream 100 bases:

>100_bases
AGCTGATTTTATAAAAAGATTCCAACCATTAATAGAAGAATATAAGTTGAATTATAAAGTTATATCTGAAGAGGAGCTAG
CACTTTTTGGTTCTAATTTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 154; Mature: 154

Protein sequence:

>154_residues
MEFKHEVENNFADIIQEYQFNLIKVNEDEIMLLHPNYALTIWKSREGIDIYYLFLHSLEKVKITNFLFSNYEKELLANII
PANNLVDKISNSLLIHARGLSKYFPELLSGQNDWIKDFKENKFYNEPRAINKDEYSAYKTNINGKKIEGFQNEI

Sequences:

>Translated_154_residues
MEFKHEVENNFADIIQEYQFNLIKVNEDEIMLLHPNYALTIWKSREGIDIYYLFLHSLEKVKITNFLFSNYEKELLANII
PANNLVDKISNSLLIHARGLSKYFPELLSGQNDWIKDFKENKFYNEPRAINKDEYSAYKTNINGKKIEGFQNEI
>Mature_154_residues
MEFKHEVENNFADIIQEYQFNLIKVNEDEIMLLHPNYALTIWKSREGIDIYYLFLHSLEKVKITNFLFSNYEKELLANII
PANNLVDKISNSLLIHARGLSKYFPELLSGQNDWIKDFKENKFYNEPRAINKDEYSAYKTNINGKKIEGFQNEI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18273; Mature: 18273

Theoretical pI: Translated: 5.30; Mature: 5.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEFKHEVENNFADIIQEYQFNLIKVNEDEIMLLHPNYALTIWKSREGIDIYYLFLHSLEK
CCCHHHHHHHHHHHHHHHCCEEEEECCCCEEEECCCEEEEEEECCCCCEEEEHHHHHHHH
VKITNFLFSNYEKELLANIIPANNLVDKISNSLLIHARGLSKYFPELLSGQNDWIKDFKE
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCEEEEECCHHHHHHHHHCCCCHHHHHHHH
NKFYNEPRAINKDEYSAYKTNINGKKIEGFQNEI
CCCCCCCCCCCCCCCHHEECCCCCCEECCCCCCC
>Mature Secondary Structure
MEFKHEVENNFADIIQEYQFNLIKVNEDEIMLLHPNYALTIWKSREGIDIYYLFLHSLEK
CCCHHHHHHHHHHHHHHHCCEEEEECCCCEEEECCCEEEEEEECCCCCEEEEHHHHHHHH
VKITNFLFSNYEKELLANIIPANNLVDKISNSLLIHARGLSKYFPELLSGQNDWIKDFKE
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCEEEEECCHHHHHHHHHCCCCHHHHHHHH
NKFYNEPRAINKDEYSAYKTNINGKKIEGFQNEI
CCCCCCCCCCCCCCCHHEECCCCCCEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA