Definition Listeria welshimeri serovar 6b str. SLCC5334, complete genome.
Accession NC_008555
Length 2,814,130

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The map label for this gene is 116872488

Identifier: 116872488

GI number: 116872488

Start: 1094293

End: 1095267

Strand: Direct

Name: 116872488

Synonym: lwe1072

Alternate gene names: NA

Gene position: 1094293-1095267 (Clockwise)

Preceding gene: 116872487

Following gene: 116872489

Centisome position: 38.89

GC content: 29.85

Gene sequence:

>975_bases
ATGGAACGTGATTTTAGTTATCTTGTAGCTAAACATGGAGATGCGGGTGCTCGTGAAATATTTGAGAATATTTGTGTCGC
TCTTTTTCAAGCTATATACGATTCAAAAGCAAAACCAGTAAAGCCTTGTCAAGGAGATGGAGGAATCGATGTTTTAATTG
GTGATCTTCCAGAGGCTGAGAAAGTATATCAGTGTAAGTTTTTTTTGAATAAAATAGGAGATTCTCAAAAGCAACAAATT
CGTGATTCGTTCAAGACTGTAACAGAAAAATATAATGTGAAAGAGTGGTACTTATGTTTACCCATAGTGCTAACTGAAAA
AGAATTACTGTGGTGGTCTCAATGGAAAAATAAGATGGAAACAGATAAAGGAATAAAAATTGATCTTTGTGATGGGAGCT
ATTTAATTAATTCTTTGAAAAAATTTGATTTATATACTGAAAAATTTGACGATGATATCAGAATGCAATTAGACCAAATT
TTAAAAGAATTATTATTGAAACGTCAGCAGATTGTAGAAGAGATTATTTATGGAATTGAGGATATAGAAAATATTGAAGA
AGAGTATAATGACTTTGTTTTTATAAAAATGTTGGAAAGTGCAAAAATTACTAATTTAAATACATGTAAGATGGAATATT
TTAATGCTGAAATATCAATGAAAGAGGGGATTAGTAAAGATGCAATTTGTGGATCGAAAGTGTATGGGAACCTTAAAAAA
AAGGTTCTAACTATTTGGGATACGCAATATAGAATACATAAACATCCGTCAAATGGAAATAATCTACTAAATAATACGTA
TCTACGTATTGAGGACTTAGATTCAAGCACATTAAATGCTACTGCTGAATATTCGTTGTTAGCAAAAAAGGGACTTTTAC
ATCATTTAGCTAACGAAAAACAACTTGGATGGGTTGAAGATTATTTGAATAAATTAACGGAATATATGAGGATAAATAAT
GATAGAAATTATTAA

Upstream 100 bases:

>100_bases
TATACCATTATGTTCGGAAAATATTATCAATTTACTATAATAATTAAGAAAGATAGATGATTATTTAAGTTAATAATCAC
AAAAATATTGAGGTGATAGA

Downstream 100 bases:

>100_bases
GGGAATAGGTTTTCAAGAATATAATTTGACCATAGTACGGATAGTCACTTTTTTATCGATAATGGGTGAACATCATAAGA
AATCAATAACAAAGGATAAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 324; Mature: 324

Protein sequence:

>324_residues
MERDFSYLVAKHGDAGAREIFENICVALFQAIYDSKAKPVKPCQGDGGIDVLIGDLPEAEKVYQCKFFLNKIGDSQKQQI
RDSFKTVTEKYNVKEWYLCLPIVLTEKELLWWSQWKNKMETDKGIKIDLCDGSYLINSLKKFDLYTEKFDDDIRMQLDQI
LKELLLKRQQIVEEIIYGIEDIENIEEEYNDFVFIKMLESAKITNLNTCKMEYFNAEISMKEGISKDAICGSKVYGNLKK
KVLTIWDTQYRIHKHPSNGNNLLNNTYLRIEDLDSSTLNATAEYSLLAKKGLLHHLANEKQLGWVEDYLNKLTEYMRINN
DRNY

Sequences:

>Translated_324_residues
MERDFSYLVAKHGDAGAREIFENICVALFQAIYDSKAKPVKPCQGDGGIDVLIGDLPEAEKVYQCKFFLNKIGDSQKQQI
RDSFKTVTEKYNVKEWYLCLPIVLTEKELLWWSQWKNKMETDKGIKIDLCDGSYLINSLKKFDLYTEKFDDDIRMQLDQI
LKELLLKRQQIVEEIIYGIEDIENIEEEYNDFVFIKMLESAKITNLNTCKMEYFNAEISMKEGISKDAICGSKVYGNLKK
KVLTIWDTQYRIHKHPSNGNNLLNNTYLRIEDLDSSTLNATAEYSLLAKKGLLHHLANEKQLGWVEDYLNKLTEYMRINN
DRNY
>Mature_324_residues
MERDFSYLVAKHGDAGAREIFENICVALFQAIYDSKAKPVKPCQGDGGIDVLIGDLPEAEKVYQCKFFLNKIGDSQKQQI
RDSFKTVTEKYNVKEWYLCLPIVLTEKELLWWSQWKNKMETDKGIKIDLCDGSYLINSLKKFDLYTEKFDDDIRMQLDQI
LKELLLKRQQIVEEIIYGIEDIENIEEEYNDFVFIKMLESAKITNLNTCKMEYFNAEISMKEGISKDAICGSKVYGNLKK
KVLTIWDTQYRIHKHPSNGNNLLNNTYLRIEDLDSSTLNATAEYSLLAKKGLLHHLANEKQLGWVEDYLNKLTEYMRINN
DRNY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37845; Mature: 37845

Theoretical pI: Translated: 5.20; Mature: 5.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MERDFSYLVAKHGDAGAREIFENICVALFQAIYDSKAKPVKPCQGDGGIDVLIGDLPEAE
CCCCHHHHEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCCCHH
KVYQCKFFLNKIGDSQKQQIRDSFKTVTEKYNVKEWYLCLPIVLTEKELLWWSQWKNKME
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCEEEEEHEEECCHHHHHHHHHHHHCC
TDKGIKIDLCDGSYLINSLKKFDLYTEKFDDDIRMQLDQILKELLLKRQQIVEEIIYGIE
CCCCCEEEECCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DIENIEEEYNDFVFIKMLESAKITNLNTCKMEYFNAEISMKEGISKDAICGSKVYGNLKK
HHHHHHHHHCCEEEEEEECCCCCCCCCHHEEEHHCCEEEHHCCCCCCCCCCHHHHHHHHH
KVLTIWDTQYRIHKHPSNGNNLLNNTYLRIEDLDSSTLNATAEYSLLAKKGLLHHLANEK
HEEEEECCCEEEEECCCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCC
QLGWVEDYLNKLTEYMRINNDRNY
CCCHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MERDFSYLVAKHGDAGAREIFENICVALFQAIYDSKAKPVKPCQGDGGIDVLIGDLPEAE
CCCCHHHHEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCCCHH
KVYQCKFFLNKIGDSQKQQIRDSFKTVTEKYNVKEWYLCLPIVLTEKELLWWSQWKNKME
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCEEEEEHEEECCHHHHHHHHHHHHCC
TDKGIKIDLCDGSYLINSLKKFDLYTEKFDDDIRMQLDQILKELLLKRQQIVEEIIYGIE
CCCCCEEEECCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DIENIEEEYNDFVFIKMLESAKITNLNTCKMEYFNAEISMKEGISKDAICGSKVYGNLKK
HHHHHHHHHCCEEEEEEECCCCCCCCCHHEEEHHCCEEEHHCCCCCCCCCCHHHHHHHHH
KVLTIWDTQYRIHKHPSNGNNLLNNTYLRIEDLDSSTLNATAEYSLLAKKGLLHHLANEK
HEEEEECCCEEEEECCCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCC
QLGWVEDYLNKLTEYMRINNDRNY
CCCHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA