| Definition | Listeria welshimeri serovar 6b str. SLCC5334, complete genome. |
|---|---|
| Accession | NC_008555 |
| Length | 2,814,130 |
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The map label for this gene is 116872488
Identifier: 116872488
GI number: 116872488
Start: 1094293
End: 1095267
Strand: Direct
Name: 116872488
Synonym: lwe1072
Alternate gene names: NA
Gene position: 1094293-1095267 (Clockwise)
Preceding gene: 116872487
Following gene: 116872489
Centisome position: 38.89
GC content: 29.85
Gene sequence:
>975_bases ATGGAACGTGATTTTAGTTATCTTGTAGCTAAACATGGAGATGCGGGTGCTCGTGAAATATTTGAGAATATTTGTGTCGC TCTTTTTCAAGCTATATACGATTCAAAAGCAAAACCAGTAAAGCCTTGTCAAGGAGATGGAGGAATCGATGTTTTAATTG GTGATCTTCCAGAGGCTGAGAAAGTATATCAGTGTAAGTTTTTTTTGAATAAAATAGGAGATTCTCAAAAGCAACAAATT CGTGATTCGTTCAAGACTGTAACAGAAAAATATAATGTGAAAGAGTGGTACTTATGTTTACCCATAGTGCTAACTGAAAA AGAATTACTGTGGTGGTCTCAATGGAAAAATAAGATGGAAACAGATAAAGGAATAAAAATTGATCTTTGTGATGGGAGCT ATTTAATTAATTCTTTGAAAAAATTTGATTTATATACTGAAAAATTTGACGATGATATCAGAATGCAATTAGACCAAATT TTAAAAGAATTATTATTGAAACGTCAGCAGATTGTAGAAGAGATTATTTATGGAATTGAGGATATAGAAAATATTGAAGA AGAGTATAATGACTTTGTTTTTATAAAAATGTTGGAAAGTGCAAAAATTACTAATTTAAATACATGTAAGATGGAATATT TTAATGCTGAAATATCAATGAAAGAGGGGATTAGTAAAGATGCAATTTGTGGATCGAAAGTGTATGGGAACCTTAAAAAA AAGGTTCTAACTATTTGGGATACGCAATATAGAATACATAAACATCCGTCAAATGGAAATAATCTACTAAATAATACGTA TCTACGTATTGAGGACTTAGATTCAAGCACATTAAATGCTACTGCTGAATATTCGTTGTTAGCAAAAAAGGGACTTTTAC ATCATTTAGCTAACGAAAAACAACTTGGATGGGTTGAAGATTATTTGAATAAATTAACGGAATATATGAGGATAAATAAT GATAGAAATTATTAA
Upstream 100 bases:
>100_bases TATACCATTATGTTCGGAAAATATTATCAATTTACTATAATAATTAAGAAAGATAGATGATTATTTAAGTTAATAATCAC AAAAATATTGAGGTGATAGA
Downstream 100 bases:
>100_bases GGGAATAGGTTTTCAAGAATATAATTTGACCATAGTACGGATAGTCACTTTTTTATCGATAATGGGTGAACATCATAAGA AATCAATAACAAAGGATAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 324; Mature: 324
Protein sequence:
>324_residues MERDFSYLVAKHGDAGAREIFENICVALFQAIYDSKAKPVKPCQGDGGIDVLIGDLPEAEKVYQCKFFLNKIGDSQKQQI RDSFKTVTEKYNVKEWYLCLPIVLTEKELLWWSQWKNKMETDKGIKIDLCDGSYLINSLKKFDLYTEKFDDDIRMQLDQI LKELLLKRQQIVEEIIYGIEDIENIEEEYNDFVFIKMLESAKITNLNTCKMEYFNAEISMKEGISKDAICGSKVYGNLKK KVLTIWDTQYRIHKHPSNGNNLLNNTYLRIEDLDSSTLNATAEYSLLAKKGLLHHLANEKQLGWVEDYLNKLTEYMRINN DRNY
Sequences:
>Translated_324_residues MERDFSYLVAKHGDAGAREIFENICVALFQAIYDSKAKPVKPCQGDGGIDVLIGDLPEAEKVYQCKFFLNKIGDSQKQQI RDSFKTVTEKYNVKEWYLCLPIVLTEKELLWWSQWKNKMETDKGIKIDLCDGSYLINSLKKFDLYTEKFDDDIRMQLDQI LKELLLKRQQIVEEIIYGIEDIENIEEEYNDFVFIKMLESAKITNLNTCKMEYFNAEISMKEGISKDAICGSKVYGNLKK KVLTIWDTQYRIHKHPSNGNNLLNNTYLRIEDLDSSTLNATAEYSLLAKKGLLHHLANEKQLGWVEDYLNKLTEYMRINN DRNY >Mature_324_residues MERDFSYLVAKHGDAGAREIFENICVALFQAIYDSKAKPVKPCQGDGGIDVLIGDLPEAEKVYQCKFFLNKIGDSQKQQI RDSFKTVTEKYNVKEWYLCLPIVLTEKELLWWSQWKNKMETDKGIKIDLCDGSYLINSLKKFDLYTEKFDDDIRMQLDQI LKELLLKRQQIVEEIIYGIEDIENIEEEYNDFVFIKMLESAKITNLNTCKMEYFNAEISMKEGISKDAICGSKVYGNLKK KVLTIWDTQYRIHKHPSNGNNLLNNTYLRIEDLDSSTLNATAEYSLLAKKGLLHHLANEKQLGWVEDYLNKLTEYMRINN DRNY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37845; Mature: 37845
Theoretical pI: Translated: 5.20; Mature: 5.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MERDFSYLVAKHGDAGAREIFENICVALFQAIYDSKAKPVKPCQGDGGIDVLIGDLPEAE CCCCHHHHEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCCCHH KVYQCKFFLNKIGDSQKQQIRDSFKTVTEKYNVKEWYLCLPIVLTEKELLWWSQWKNKME HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCEEEEEHEEECCHHHHHHHHHHHHCC TDKGIKIDLCDGSYLINSLKKFDLYTEKFDDDIRMQLDQILKELLLKRQQIVEEIIYGIE CCCCCEEEECCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DIENIEEEYNDFVFIKMLESAKITNLNTCKMEYFNAEISMKEGISKDAICGSKVYGNLKK HHHHHHHHHCCEEEEEEECCCCCCCCCHHEEEHHCCEEEHHCCCCCCCCCCHHHHHHHHH KVLTIWDTQYRIHKHPSNGNNLLNNTYLRIEDLDSSTLNATAEYSLLAKKGLLHHLANEK HEEEEECCCEEEEECCCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCC QLGWVEDYLNKLTEYMRINNDRNY CCCHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MERDFSYLVAKHGDAGAREIFENICVALFQAIYDSKAKPVKPCQGDGGIDVLIGDLPEAE CCCCHHHHEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCCCHH KVYQCKFFLNKIGDSQKQQIRDSFKTVTEKYNVKEWYLCLPIVLTEKELLWWSQWKNKME HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCEEEEEHEEECCHHHHHHHHHHHHCC TDKGIKIDLCDGSYLINSLKKFDLYTEKFDDDIRMQLDQILKELLLKRQQIVEEIIYGIE CCCCCEEEECCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DIENIEEEYNDFVFIKMLESAKITNLNTCKMEYFNAEISMKEGISKDAICGSKVYGNLKK HHHHHHHHHCCEEEEEEECCCCCCCCCHHEEEHHCCEEEHHCCCCCCCCCCHHHHHHHHH KVLTIWDTQYRIHKHPSNGNNLLNNTYLRIEDLDSSTLNATAEYSLLAKKGLLHHLANEK HEEEEECCCEEEEECCCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCC QLGWVEDYLNKLTEYMRINNDRNY CCCHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA