Definition Listeria welshimeri serovar 6b str. SLCC5334, complete genome.
Accession NC_008555
Length 2,814,130

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The map label for this gene is 116872486

Identifier: 116872486

GI number: 116872486

Start: 1091426

End: 1091830

Strand: Direct

Name: 116872486

Synonym: lwe1070

Alternate gene names: NA

Gene position: 1091426-1091830 (Clockwise)

Preceding gene: 116872485

Following gene: 116872487

Centisome position: 38.78

GC content: 39.26

Gene sequence:

>405_bases
ATGCAAACGTTGATGATTGTTTGTGCTGGTGGCGCAACGTCAAGCTTAATGGCGCAAAATGTAGTAAAAAGCGCTACTTT
AGATGGAATGAATGCAGTTTTAGTATTTCCAGAAGATGTGAAATATAAAGATAGTTTTTATGAAAAATATAGCGAGCGGG
ATTTGGTGGTTGTGATGGGACCAGTTGGCGCTATTACAGCCGGGAAATTCCGTGATTATAAAGAACAAGTCGATGCAGTA
TTAGTAGCGCCACAAGTGAAATATATGTATAAAACAGTAGAAGAGGTTTTAGGAGATCTAAATATTCCTTGTGCTAATAT
TGATTCGCTTGATTTCGGTCGGATGCGGGGAGACAAGATTCTCACACAAGGTCTAGCCTTGATGGGTGCGAAAAATTCCA
AATAA

Upstream 100 bases:

>100_bases
GAATACAAGAATTAGACATACTCGGCGGAAAAGGCATATAGCTTTAACAACAAGAATGATTCTGGGAAATTCCTAGAATC
ATTTTTTGGAGGGATGACAA

Downstream 100 bases:

>100_bases
GGTGTTGCAACTTTAGAGGGGAAACGTTAAAATGAAAGAAGATGAAAAGGACAAGTGATTTGTCCTTTTCTTATATTATA
GTGAAGTAACCGCAATTTTG

Product: PTS system, IIB component, putative

Products: protein histidine; sugar phosphate

Alternate protein names: PTS System Cellobiose-Specific IIB Component

Number of amino acids: Translated: 134; Mature: 134

Protein sequence:

>134_residues
MQTLMIVCAGGATSSLMAQNVVKSATLDGMNAVLVFPEDVKYKDSFYEKYSERDLVVVMGPVGAITAGKFRDYKEQVDAV
LVAPQVKYMYKTVEEVLGDLNIPCANIDSLDFGRMRGDKILTQGLALMGAKNSK

Sequences:

>Translated_134_residues
MQTLMIVCAGGATSSLMAQNVVKSATLDGMNAVLVFPEDVKYKDSFYEKYSERDLVVVMGPVGAITAGKFRDYKEQVDAV
LVAPQVKYMYKTVEEVLGDLNIPCANIDSLDFGRMRGDKILTQGLALMGAKNSK
>Mature_134_residues
MQTLMIVCAGGATSSLMAQNVVKSATLDGMNAVLVFPEDVKYKDSFYEKYSERDLVVVMGPVGAITAGKFRDYKEQVDAV
LVAPQVKYMYKTVEEVLGDLNIPCANIDSLDFGRMRGDKILTQGLALMGAKNSK

Specific function: Unknown

COG id: COG1440

COG function: function code G; Phosphotransferase system cellobiose-specific component IIB

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 2.7.1.69

Molecular weight: Translated: 14608; Mature: 14608

Theoretical pI: Translated: 5.17; Mature: 5.17

Prosite motif: PS51100 PTS_EIIB_TYPE_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
6.0 %Met     (Translated Protein)
7.5 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
6.0 %Met     (Mature Protein)
7.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQTLMIVCAGGATSSLMAQNVVKSATLDGMNAVLVFPEDVKYKDSFYEKYSERDLVVVMG
CCEEEEEEECCCCHHHHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHCCCCEEEEEC
PVGAITAGKFRDYKEQVDAVLVAPQVKYMYKTVEEVLGDLNIPCANIDSLDFGRMRGDKI
CCCCCCCCHHHHHHHHHCEEEECHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHCCHHH
LTQGLALMGAKNSK
HHHHHHHHCCCCCC
>Mature Secondary Structure
MQTLMIVCAGGATSSLMAQNVVKSATLDGMNAVLVFPEDVKYKDSFYEKYSERDLVVVMG
CCEEEEEEECCCCHHHHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHCCCCEEEEEC
PVGAITAGKFRDYKEQVDAVLVAPQVKYMYKTVEEVLGDLNIPCANIDSLDFGRMRGDKI
CCCCCCCCHHHHHHHHHCEEEECHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHCCHHH
LTQGLALMGAKNSK
HHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: protein N(pi)-phosphohistidine; sugar

Specific reaction: protein N(pi)-phosphohistidine + sugar = protein histidine + sugar phosphate

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA