| Definition | Listeria welshimeri serovar 6b str. SLCC5334, complete genome. |
|---|---|
| Accession | NC_008555 |
| Length | 2,814,130 |
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The map label for this gene is 116872486
Identifier: 116872486
GI number: 116872486
Start: 1091426
End: 1091830
Strand: Direct
Name: 116872486
Synonym: lwe1070
Alternate gene names: NA
Gene position: 1091426-1091830 (Clockwise)
Preceding gene: 116872485
Following gene: 116872487
Centisome position: 38.78
GC content: 39.26
Gene sequence:
>405_bases ATGCAAACGTTGATGATTGTTTGTGCTGGTGGCGCAACGTCAAGCTTAATGGCGCAAAATGTAGTAAAAAGCGCTACTTT AGATGGAATGAATGCAGTTTTAGTATTTCCAGAAGATGTGAAATATAAAGATAGTTTTTATGAAAAATATAGCGAGCGGG ATTTGGTGGTTGTGATGGGACCAGTTGGCGCTATTACAGCCGGGAAATTCCGTGATTATAAAGAACAAGTCGATGCAGTA TTAGTAGCGCCACAAGTGAAATATATGTATAAAACAGTAGAAGAGGTTTTAGGAGATCTAAATATTCCTTGTGCTAATAT TGATTCGCTTGATTTCGGTCGGATGCGGGGAGACAAGATTCTCACACAAGGTCTAGCCTTGATGGGTGCGAAAAATTCCA AATAA
Upstream 100 bases:
>100_bases GAATACAAGAATTAGACATACTCGGCGGAAAAGGCATATAGCTTTAACAACAAGAATGATTCTGGGAAATTCCTAGAATC ATTTTTTGGAGGGATGACAA
Downstream 100 bases:
>100_bases GGTGTTGCAACTTTAGAGGGGAAACGTTAAAATGAAAGAAGATGAAAAGGACAAGTGATTTGTCCTTTTCTTATATTATA GTGAAGTAACCGCAATTTTG
Product: PTS system, IIB component, putative
Products: protein histidine; sugar phosphate
Alternate protein names: PTS System Cellobiose-Specific IIB Component
Number of amino acids: Translated: 134; Mature: 134
Protein sequence:
>134_residues MQTLMIVCAGGATSSLMAQNVVKSATLDGMNAVLVFPEDVKYKDSFYEKYSERDLVVVMGPVGAITAGKFRDYKEQVDAV LVAPQVKYMYKTVEEVLGDLNIPCANIDSLDFGRMRGDKILTQGLALMGAKNSK
Sequences:
>Translated_134_residues MQTLMIVCAGGATSSLMAQNVVKSATLDGMNAVLVFPEDVKYKDSFYEKYSERDLVVVMGPVGAITAGKFRDYKEQVDAV LVAPQVKYMYKTVEEVLGDLNIPCANIDSLDFGRMRGDKILTQGLALMGAKNSK >Mature_134_residues MQTLMIVCAGGATSSLMAQNVVKSATLDGMNAVLVFPEDVKYKDSFYEKYSERDLVVVMGPVGAITAGKFRDYKEQVDAV LVAPQVKYMYKTVEEVLGDLNIPCANIDSLDFGRMRGDKILTQGLALMGAKNSK
Specific function: Unknown
COG id: COG1440
COG function: function code G; Phosphotransferase system cellobiose-specific component IIB
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 2.7.1.69
Molecular weight: Translated: 14608; Mature: 14608
Theoretical pI: Translated: 5.17; Mature: 5.17
Prosite motif: PS51100 PTS_EIIB_TYPE_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 6.0 %Met (Translated Protein) 7.5 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 6.0 %Met (Mature Protein) 7.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQTLMIVCAGGATSSLMAQNVVKSATLDGMNAVLVFPEDVKYKDSFYEKYSERDLVVVMG CCEEEEEEECCCCHHHHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHCCCCEEEEEC PVGAITAGKFRDYKEQVDAVLVAPQVKYMYKTVEEVLGDLNIPCANIDSLDFGRMRGDKI CCCCCCCCHHHHHHHHHCEEEECHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHCCHHH LTQGLALMGAKNSK HHHHHHHHCCCCCC >Mature Secondary Structure MQTLMIVCAGGATSSLMAQNVVKSATLDGMNAVLVFPEDVKYKDSFYEKYSERDLVVVMG CCEEEEEEECCCCHHHHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHCCCCEEEEEC PVGAITAGKFRDYKEQVDAVLVAPQVKYMYKTVEEVLGDLNIPCANIDSLDFGRMRGDKI CCCCCCCCHHHHHHHHHCEEEECHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHCCHHH LTQGLALMGAKNSK HHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: protein N(pi)-phosphohistidine; sugar
Specific reaction: protein N(pi)-phosphohistidine + sugar = protein histidine + sugar phosphate
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA