| Definition | Listeria welshimeri serovar 6b str. SLCC5334, complete genome. |
|---|---|
| Accession | NC_008555 |
| Length | 2,814,130 |
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The map label for this gene is 116872464
Identifier: 116872464
GI number: 116872464
Start: 1061294
End: 1062193
Strand: Direct
Name: 116872464
Synonym: lwe1046
Alternate gene names: NA
Gene position: 1061294-1062193 (Clockwise)
Preceding gene: 116872463
Following gene: 116872466
Centisome position: 37.71
GC content: 32.56
Gene sequence:
>900_bases ATGAAAAAACGGATAATTATATTTACAGTTTTAATAATTCTTCTTGTAAGTGGGGTTGTGATTGGTGTCTATGCTAATAG TAGTAATACTGATGCTAAGCCGGATAAAACTAAAACAAGCACAACAACCAATAAACCAAAATCCACAACAAAAGAAGAAA AAAAGCCGGCTGATACAGCTACTGACAAAAAAGACTCTTCAAACGAAACTTCAAAAGATACAGTTACAGACGACAAAGGT GTGGTTACAAAAGGTAGCTCAGATGTAGAAAAAAATGCCCCAGCTAAAAACAGCACAGGTTCAAAAGAACAAAATAAAAG TGAAACTCCAACAACACCTACCTTCTCCTTATCAACTTTAGGATTTAAAACTTCTAATGTTGCTCCTGTCCTTGGAGGGA ATGTAACAACAACTTATTTATCAAGTACACCTTCTTTTCAAAAAATATTTCAAAATTTAACGATTGAAATCAATCAATAC AAAGTTGAACATGTAGTGAACGCTGATAAAAATGTTAGTGCTAGCAATCCCGAGAGCTTTTTAGCAAATAAAAATGGTTA TGTAATTACATTAGATATTTCTATAAAAAATACTTCTACCAAAGATAAAATGTATAAAGCTGATCAAATAAGTCTTGTAG GAGCAAATGAATTTGCTGGAGGAAGTTTAGACAATTTTGTTCCATCAAACTACCATTTAATTGGAAGTAAATCAGACCCA TACAATTTTACTGCAGAAAAAACAGCTCGAGGCTTACTAACCTTTACTATGACAGAAGACGTATATAATGATATCGCTTC TAATCCAAAAATTGGAGTACCAAATCCAGATAAATTTGATTCAACCATTTCACAAGATAAAGCAGGCGATGATATTGTTG TTGCCTTTCCAGTAAAATGA
Upstream 100 bases:
>100_bases AAGTATGAGAAAAGGGAATAAAATAATGAGTTTGTAACACTATTGTAATATGATGAGCTATTTGGTATATTATAAGTAAG TAGAAAAGGTGGTTAGGGAT
Downstream 100 bases:
>100_bases AAAAACGCCCATAACGTTGGGCGTTTTTTCATTTCGTGTTAGTATCTATTAACTTTTTTAACTCACTATTCGAAATCACT GCTGGTTTATGAAAATTGAA
Product: putative secreted protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 299; Mature: 299
Protein sequence:
>299_residues MKKRIIIFTVLIILLVSGVVIGVYANSSNTDAKPDKTKTSTTTNKPKSTTKEEKKPADTATDKKDSSNETSKDTVTDDKG VVTKGSSDVEKNAPAKNSTGSKEQNKSETPTTPTFSLSTLGFKTSNVAPVLGGNVTTTYLSSTPSFQKIFQNLTIEINQY KVEHVVNADKNVSASNPESFLANKNGYVITLDISIKNTSTKDKMYKADQISLVGANEFAGGSLDNFVPSNYHLIGSKSDP YNFTAEKTARGLLTFTMTEDVYNDIASNPKIGVPNPDKFDSTISQDKAGDDIVVAFPVK
Sequences:
>Translated_299_residues MKKRIIIFTVLIILLVSGVVIGVYANSSNTDAKPDKTKTSTTTNKPKSTTKEEKKPADTATDKKDSSNETSKDTVTDDKG VVTKGSSDVEKNAPAKNSTGSKEQNKSETPTTPTFSLSTLGFKTSNVAPVLGGNVTTTYLSSTPSFQKIFQNLTIEINQY KVEHVVNADKNVSASNPESFLANKNGYVITLDISIKNTSTKDKMYKADQISLVGANEFAGGSLDNFVPSNYHLIGSKSDP YNFTAEKTARGLLTFTMTEDVYNDIASNPKIGVPNPDKFDSTISQDKAGDDIVVAFPVK >Mature_299_residues MKKRIIIFTVLIILLVSGVVIGVYANSSNTDAKPDKTKTSTTTNKPKSTTKEEKKPADTATDKKDSSNETSKDTVTDDKG VVTKGSSDVEKNAPAKNSTGSKEQNKSETPTTPTFSLSTLGFKTSNVAPVLGGNVTTTYLSSTPSFQKIFQNLTIEINQY KVEHVVNADKNVSASNPESFLANKNGYVITLDISIKNTSTKDKMYKADQISLVGANEFAGGSLDNFVPSNYHLIGSKSDP YNFTAEKTARGLLTFTMTEDVYNDIASNPKIGVPNPDKFDSTISQDKAGDDIVVAFPVK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32205; Mature: 32205
Theoretical pI: Translated: 9.06; Mature: 9.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKRIIIFTVLIILLVSGVVIGVYANSSNTDAKPDKTKTSTTTNKPKSTTKEEKKPADTA CCCEEHHHHHHHHHHHCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCC TDKKDSSNETSKDTVTDDKGVVTKGSSDVEKNAPAKNSTGSKEQNKSETPTTPTFSLSTL CCCCCCCCCCCCCCCCCCCCEEECCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEC GFKTSNVAPVLGGNVTTTYLSSTPSFQKIFQNLTIEINQYKVEHVVNADKNVSASNPESF CCCCCCCCEEECCCEEEEEECCCCHHHHHHHCCEEEEEEEEEEEHHCCCCCCCCCCCHHH LANKNGYVITLDISIKNTSTKDKMYKADQISLVGANEFAGGSLDNFVPSNYHLIGSKSDP HCCCCCEEEEEEEEECCCCCHHHHCCCCEEEEEECCCCCCCCHHCCCCCCEEEECCCCCC YNFTAEKTARGLLTFTMTEDVYNDIASNPKIGVPNPDKFDSTISQDKAGDDIVVAFPVK CCEEHHHHCCEEEEEEECHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCCEEEEEECC >Mature Secondary Structure MKKRIIIFTVLIILLVSGVVIGVYANSSNTDAKPDKTKTSTTTNKPKSTTKEEKKPADTA CCCEEHHHHHHHHHHHCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCC TDKKDSSNETSKDTVTDDKGVVTKGSSDVEKNAPAKNSTGSKEQNKSETPTTPTFSLSTL CCCCCCCCCCCCCCCCCCCCEEECCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEC GFKTSNVAPVLGGNVTTTYLSSTPSFQKIFQNLTIEINQYKVEHVVNADKNVSASNPESF CCCCCCCCEEECCCEEEEEECCCCHHHHHHHCCEEEEEEEEEEEHHCCCCCCCCCCCHHH LANKNGYVITLDISIKNTSTKDKMYKADQISLVGANEFAGGSLDNFVPSNYHLIGSKSDP HCCCCCEEEEEEEEECCCCCHHHHCCCCEEEEEECCCCCCCCHHCCCCCCEEEECCCCCC YNFTAEKTARGLLTFTMTEDVYNDIASNPKIGVPNPDKFDSTISQDKAGDDIVVAFPVK CCEEHHHHCCEEEEEEECHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA