| Definition | Listeria welshimeri serovar 6b str. SLCC5334, complete genome. |
|---|---|
| Accession | NC_008555 |
| Length | 2,814,130 |
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The map label for this gene is 116872146
Identifier: 116872146
GI number: 116872146
Start: 750033
End: 751331
Strand: Direct
Name: 116872146
Synonym: lwe0726
Alternate gene names: NA
Gene position: 750033-751331 (Clockwise)
Preceding gene: 116872145
Following gene: 116872147
Centisome position: 26.65
GC content: 35.41
Gene sequence:
>1299_bases TTGGTTATCGCAAATCGTGCTTTTATACAATCAAGTACGGAAAAAATAAAAAAAGAAATAAATAATCAAAAATTGGCTGA AATGTATGAAAGGTGTATGGAAAACACATTAGACACCACAATTAAAATTCGAGAAAGTGGTCTCACATTTATCTTAACTG GAGATATTCCAGCAATGTGGTTACGTGATTCAGTATGCCAAGTACGACCTTTTCTAATTTTTGCTAAAGAAAATGAAGAA ATTCAGTCGATGTTAATTGGTCTTAGCAAGGAACAAGTGAGTTTAGTTGGAATAGATCCTTATGCTAACGCTTTCAATGA AACGCCAAATGGAGCCGGACATCAAGCAGATAAAACAGAAATGCACCCACAAGTATGGGAACGCAAATATGAGATTGATT CGTTATGTTATCCGATTCAATTAGCGTATCTTATTTGGAAAATTACCGGAAGAACAGAACAATTTGACGCAGCGTTTTTC AAGATGTTGCAAACTATTTTTGCTGTATGGGAAGTAGAGCAGCATCATGAAACAAAATCGCCTTATCGTTTTGAGCGAAT GGACTGTGTTCCTTCTGATACTTTAAAAAGAGATGGATTAGGAACTAAAACTGCTTATACAGGAATGCTTTGGTCAGGAT TTAGACCAAGTGATGATGCTTGTGAATATGGGTATCTCATTCCATCTAATATGTTTGCTGTAGTAGTTTTAGGTTATGCA AAAGAAATTATCGAAACATTTTATCCAAGTGAAAAGGAAACAGTGAAACAAGCAGTAACTTTAAAAAATGATATCCAATT AGGAATTGAAAAATTCGGTACATATAATCATCCTACTTTTGGTGAAATATTTGCATTTGAAGTAGATGGTCTTGGAAATC AATTATTAATGGATGACGCCAATGTTCCAAGTCTACTCTCTATGCCAATCATCAATTACCTTGAGAAAGAATCGCCAATT TATCAGAATACGCGGAAGTTTATTTTAAGTAAGTCAAATCCATATTATTTTGAAGGGGAACTGGCAAAAGGAATTGGTAG TCCGCATACACCAGCAGGATATATTTGGCCCATTGGACTGGCAATTCAAGGGTTAACAGCAAGTGATGAAACAGAAAAAC TTGCTATTTTACAAATGTTGTTAGAAACGGATGCTGGAACTGGATTAATGCATGAATCGTTTCATCCAGATCACCCGGAA GACTTTACACGTGAATGGTTTTCATGGGCGAATATGATGTTTTGTGAATTAGTACTGGATGTAGCTGGGTTTCGAATGGC AAATGTTTTGAAGAACTAA
Upstream 100 bases:
>100_bases AACGATTTCATTTTTATATTGACAGTGATTAAATATATATAGTATTATTTAAATATGATAAATGTCTATTAAGTATAATT AATTAAAAGGAGTGAATCAT
Downstream 100 bases:
>100_bases CGAAGGAGGCTTAATTGATGGCAACGATTAGAAATAAATCTGCCCAAATACACCAACAACGAATGGCTTATCTTTTTATT GCGCTTCCGGTTTTATTACT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 432; Mature: 432
Protein sequence:
>432_residues MVIANRAFIQSSTEKIKKEINNQKLAEMYERCMENTLDTTIKIRESGLTFILTGDIPAMWLRDSVCQVRPFLIFAKENEE IQSMLIGLSKEQVSLVGIDPYANAFNETPNGAGHQADKTEMHPQVWERKYEIDSLCYPIQLAYLIWKITGRTEQFDAAFF KMLQTIFAVWEVEQHHETKSPYRFERMDCVPSDTLKRDGLGTKTAYTGMLWSGFRPSDDACEYGYLIPSNMFAVVVLGYA KEIIETFYPSEKETVKQAVTLKNDIQLGIEKFGTYNHPTFGEIFAFEVDGLGNQLLMDDANVPSLLSMPIINYLEKESPI YQNTRKFILSKSNPYYFEGELAKGIGSPHTPAGYIWPIGLAIQGLTASDETEKLAILQMLLETDAGTGLMHESFHPDHPE DFTREWFSWANMMFCELVLDVAGFRMANVLKN
Sequences:
>Translated_432_residues MVIANRAFIQSSTEKIKKEINNQKLAEMYERCMENTLDTTIKIRESGLTFILTGDIPAMWLRDSVCQVRPFLIFAKENEE IQSMLIGLSKEQVSLVGIDPYANAFNETPNGAGHQADKTEMHPQVWERKYEIDSLCYPIQLAYLIWKITGRTEQFDAAFF KMLQTIFAVWEVEQHHETKSPYRFERMDCVPSDTLKRDGLGTKTAYTGMLWSGFRPSDDACEYGYLIPSNMFAVVVLGYA KEIIETFYPSEKETVKQAVTLKNDIQLGIEKFGTYNHPTFGEIFAFEVDGLGNQLLMDDANVPSLLSMPIINYLEKESPI YQNTRKFILSKSNPYYFEGELAKGIGSPHTPAGYIWPIGLAIQGLTASDETEKLAILQMLLETDAGTGLMHESFHPDHPE DFTREWFSWANMMFCELVLDVAGFRMANVLKN >Mature_432_residues MVIANRAFIQSSTEKIKKEINNQKLAEMYERCMENTLDTTIKIRESGLTFILTGDIPAMWLRDSVCQVRPFLIFAKENEE IQSMLIGLSKEQVSLVGIDPYANAFNETPNGAGHQADKTEMHPQVWERKYEIDSLCYPIQLAYLIWKITGRTEQFDAAFF KMLQTIFAVWEVEQHHETKSPYRFERMDCVPSDTLKRDGLGTKTAYTGMLWSGFRPSDDACEYGYLIPSNMFAVVVLGYA KEIIETFYPSEKETVKQAVTLKNDIQLGIEKFGTYNHPTFGEIFAFEVDGLGNQLLMDDANVPSLLSMPIINYLEKESPI YQNTRKFILSKSNPYYFEGELAKGIGSPHTPAGYIWPIGLAIQGLTASDETEKLAILQMLLETDAGTGLMHESFHPDHPE DFTREWFSWANMMFCELVLDVAGFRMANVLKN
Specific function: Unknown
COG id: COG3538
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 49238; Mature: 49238
Theoretical pI: Translated: 4.67; Mature: 4.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVIANRAFIQSSTEKIKKEINNQKLAEMYERCMENTLDTTIKIRESGLTFILTGDIPAMW CEECCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCEEEEEECCEEEEEECCCCHHH LRDSVCQVRPFLIFAKENEEIQSMLIGLSKEQVSLVGIDPYANAFNETPNGAGHQADKTE HHHHHHCCCEEEEEECCCHHHHHHHHCCCCCCEEEEECCHHHHHHCCCCCCCCCCCCCHH MHPQVWERKYEIDSLCYPIQLAYLIWKITGRTEQFDAAFFKMLQTIFAVWEVEQHHETKS CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC PYRFERMDCVPSDTLKRDGLGTKTAYTGMLWSGFRPSDDACEYGYLIPSNMFAVVVLGYA CCCCHHCCCCCCHHHHHCCCCCCHHHHHHHCCCCCCCCCCCCCCEECCCCHHHHHHHHHH KEIIETFYPSEKETVKQAVTLKNDIQLGIEKFGTYNHPTFGEIFAFEVDGLGNQLLMDDA HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCEEEECCC NVPSLLSMPIINYLEKESPIYQNTRKFILSKSNPYYFEGELAKGIGSPHTPAGYIWPIGL CCCHHHHHHHHHHHHHCCCHHHHHHHHEEECCCCEEECCHHHHCCCCCCCCCCEEEEECC AIQGLTASDETEKLAILQMLLETDAGTGLMHESFHPDHPEDFTREWFSWANMMFCELVLD EEECCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH VAGFRMANVLKN HHHHHHHHHHCC >Mature Secondary Structure MVIANRAFIQSSTEKIKKEINNQKLAEMYERCMENTLDTTIKIRESGLTFILTGDIPAMW CEECCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCEEEEEECCEEEEEECCCCHHH LRDSVCQVRPFLIFAKENEEIQSMLIGLSKEQVSLVGIDPYANAFNETPNGAGHQADKTE HHHHHHCCCEEEEEECCCHHHHHHHHCCCCCCEEEEECCHHHHHHCCCCCCCCCCCCCHH MHPQVWERKYEIDSLCYPIQLAYLIWKITGRTEQFDAAFFKMLQTIFAVWEVEQHHETKS CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC PYRFERMDCVPSDTLKRDGLGTKTAYTGMLWSGFRPSDDACEYGYLIPSNMFAVVVLGYA CCCCHHCCCCCCHHHHHCCCCCCHHHHHHHCCCCCCCCCCCCCCEECCCCHHHHHHHHHH KEIIETFYPSEKETVKQAVTLKNDIQLGIEKFGTYNHPTFGEIFAFEVDGLGNQLLMDDA HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCEEEECCC NVPSLLSMPIINYLEKESPIYQNTRKFILSKSNPYYFEGELAKGIGSPHTPAGYIWPIGL CCCHHHHHHHHHHHHHCCCHHHHHHHHEEECCCCEEECCHHHHCCCCCCCCCCEEEEECC AIQGLTASDETEKLAILQMLLETDAGTGLMHESFHPDHPEDFTREWFSWANMMFCELVLD EEECCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH VAGFRMANVLKN HHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA