| Definition | Listeria welshimeri serovar 6b str. SLCC5334, complete genome. |
|---|---|
| Accession | NC_008555 |
| Length | 2,814,130 |
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The map label for this gene is 116872129
Identifier: 116872129
GI number: 116872129
Start: 734480
End: 735184
Strand: Direct
Name: 116872129
Synonym: lwe0709
Alternate gene names: NA
Gene position: 734480-735184 (Clockwise)
Preceding gene: 116872128
Following gene: 116872130
Centisome position: 26.1
GC content: 33.33
Gene sequence:
>705_bases ATGAAAAAAATGATTACTTTTTATTTAAAACAAATTAGTCCTATTCTTTTAATCGGGCTTGCAATTATCTTAGGACTGAA TTTAGTAGGCCTAACAATGAATCTACTGGAAGGACCAGATTTACTATTTAGAGCTATTCGAGGAACAACCGTAATGAGCT TACTTCTTGTTCTTATCACCACATGGAAAATTACTAAGCTAGACACATCGAAAGAAAACTTAACACTTGCATCTCTATCT GGATTTTCAGAAACGAAGAAGTTTTTCGGAAAATTATTTGCTGCTTATATATCAGCGATTACTGTAATTTTAGTTCAAAG TGCTTTTATTTGGTATTACGGGTTTGAAACAGGACGCATGGAAGCTGGCGACGCGCTATCTTTTGTATCTGGAACGTTAA TGATGTTCTTATTTATCGCGATGTTTGTTTGTTATTTTGTCATCCCTGTTGGGTGGTTAAAAGATCATGTGAAAGCAAGT TATGCTCAAAAAGCAGCAGTTATCTTATTGCTTTTCGGAATTTTAATCGTGAACTTACTGGCTGAATATTACTTGCACAT TTATAACAGTGGTGGAATTATTTCGATTTTACCAAGTGGTCACTTTGAAATTTCATTGTTATCCATTATTTGGAACGCAA CATTATGTTCTATTATTGCCGGAAGCTACATTTATATGAAATCTAAAAAAATGGACACTATTTGA
Upstream 100 bases:
>100_bases GGTTAATCAAAGAAGGCACACTAAAAATAATTGAAACAGAAGATTACCGCGAGGAAACAGGCAATTCATTAATCGATTTC TATAAGGAGGAAATGAACAA
Downstream 100 bases:
>100_bases AAGTAGGAGACTAAATGTTAGAAATTACGCAACTGAAAAAATCCTATAAATTAGGAAAGAAAAACGAAACGCCTGTTTTA AAAAATATTAATGTAACTAT
Product: ABC transporter, permease protein, putative
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 234; Mature: 234
Protein sequence:
>234_residues MKKMITFYLKQISPILLIGLAIILGLNLVGLTMNLLEGPDLLFRAIRGTTVMSLLLVLITTWKITKLDTSKENLTLASLS GFSETKKFFGKLFAAYISAITVILVQSAFIWYYGFETGRMEAGDALSFVSGTLMMFLFIAMFVCYFVIPVGWLKDHVKAS YAQKAAVILLLFGILIVNLLAEYYLHIYNSGGIISILPSGHFEISLLSIIWNATLCSIIAGSYIYMKSKKMDTI
Sequences:
>Translated_234_residues MKKMITFYLKQISPILLIGLAIILGLNLVGLTMNLLEGPDLLFRAIRGTTVMSLLLVLITTWKITKLDTSKENLTLASLS GFSETKKFFGKLFAAYISAITVILVQSAFIWYYGFETGRMEAGDALSFVSGTLMMFLFIAMFVCYFVIPVGWLKDHVKAS YAQKAAVILLLFGILIVNLLAEYYLHIYNSGGIISILPSGHFEISLLSIIWNATLCSIIAGSYIYMKSKKMDTI >Mature_234_residues MKKMITFYLKQISPILLIGLAIILGLNLVGLTMNLLEGPDLLFRAIRGTTVMSLLLVLITTWKITKLDTSKENLTLASLS GFSETKKFFGKLFAAYISAITVILVQSAFIWYYGFETGRMEAGDALSFVSGTLMMFLFIAMFVCYFVIPVGWLKDHVKAS YAQKAAVILLLFGILIVNLLAEYYLHIYNSGGIISILPSGHFEISLLSIIWNATLCSIIAGSYIYMKSKKMDTI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26031; Mature: 26031
Theoretical pI: Translated: 9.56; Mature: 9.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKMITFYLKQISPILLIGLAIILGLNLVGLTMNLLEGPDLLFRAIRGTTVMSLLLVLIT CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH TWKITKLDTSKENLTLASLSGFSETKKFFGKLFAAYISAITVILVQSAFIWYYGFETGRM HHHEEEECCCCCCEEEHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCC EAGDALSFVSGTLMMFLFIAMFVCYFVIPVGWLKDHVKASYAQKAAVILLLFGILIVNLL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AEYYLHIYNSGGIISILPSGHFEISLLSIIWNATLCSIIAGSYIYMKSKKMDTI HHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHCCHHEEECCCCCCC >Mature Secondary Structure MKKMITFYLKQISPILLIGLAIILGLNLVGLTMNLLEGPDLLFRAIRGTTVMSLLLVLIT CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH TWKITKLDTSKENLTLASLSGFSETKKFFGKLFAAYISAITVILVQSAFIWYYGFETGRM HHHEEEECCCCCCEEEHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCC EAGDALSFVSGTLMMFLFIAMFVCYFVIPVGWLKDHVKASYAQKAAVILLLFGILIVNLL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AEYYLHIYNSGGIISILPSGHFEISLLSIIWNATLCSIIAGSYIYMKSKKMDTI HHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHCCHHEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA