| Definition | Listeria welshimeri serovar 6b str. SLCC5334, complete genome. |
|---|---|
| Accession | NC_008555 |
| Length | 2,814,130 |
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The map label for this gene is yhcG [H]
Identifier: 116872128
GI number: 116872128
Start: 733794
End: 734483
Strand: Direct
Name: yhcG [H]
Synonym: lwe0708
Alternate gene names: 116872128
Gene position: 733794-734483 (Clockwise)
Preceding gene: 116872127
Following gene: 116872129
Centisome position: 26.08
GC content: 34.49
Gene sequence:
>690_bases ATGTTGGTGGGAAATAATATTGCGAAATCATATCCAAATAAATTAGTGTTACAAAACTTGGATTTTGAAGCAAAACCAGG CGACATGATTGTACTAACTGGTGAAAACGGTAGTGGCAAAACGACCTTGCTAGATATGTTAGCGAATTTGAAGAAACCAG ATAGTGGCACATTAGAATTAGATAATGAAGTTTTTGCTGCTAATAACATCCGTCAGCACATCGCTTATCTAAATAATGAA CTTTATGCTAAAAAAAGTATCACCATCGAAGAATTTATGAAACAACATGCTTTGCTTTTTGAAGATATTCAATTAGATAA ATGGGACAGATTGCTTTCAGGCTGGCGCATTAACAAGCGGCTAAAACTTGGTGAATTATCGACTGGTATGCTAATGAAAG TGAAAATTGGCGGTGTTTTAGCAAGAAAAGCCAAAGTATATCTTTATGATGAACCTTTTGCGAACATCGATATTATGGCT CGTTCAGAAGTAATGAAAGCTATTATTAGCGAAACAGAGCCAGATGTTATCACGATTATTTCTTCGCATCATTTAGAAGG AACGGAAAAATTATATAACAAACTGTGGTTAATCAAAGAAGGCACACTAAAAATAATTGAAACAGAAGATTACCGCGAGG AAACAGGCAATTCATTAATCGATTTCTATAAGGAGGAAATGAACAAATGA
Upstream 100 bases:
>100_bases AAACAACTTACCGAAAATTTTATTAACGAAATGAGTAAATTAGGAATTAATAAAGAAAAAATTATCGCTTGGGTGAAAAA AGTAGAGGAGGTAGAAGTTA
Downstream 100 bases:
>100_bases AAAAAATGATTACTTTTTATTTAAAACAAATTAGTCCTATTCTTTTAATCGGGCTTGCAATTATCTTAGGACTGAATTTA GTAGGCCTAACAATGAATCT
Product: ABC transporter, ATP-binding protein
Products: ADP; phosphate; L-glutamine [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 229; Mature: 229
Protein sequence:
>229_residues MLVGNNIAKSYPNKLVLQNLDFEAKPGDMIVLTGENGSGKTTLLDMLANLKKPDSGTLELDNEVFAANNIRQHIAYLNNE LYAKKSITIEEFMKQHALLFEDIQLDKWDRLLSGWRINKRLKLGELSTGMLMKVKIGGVLARKAKVYLYDEPFANIDIMA RSEVMKAIISETEPDVITIISSHHLEGTEKLYNKLWLIKEGTLKIIETEDYREETGNSLIDFYKEEMNK
Sequences:
>Translated_229_residues MLVGNNIAKSYPNKLVLQNLDFEAKPGDMIVLTGENGSGKTTLLDMLANLKKPDSGTLELDNEVFAANNIRQHIAYLNNE LYAKKSITIEEFMKQHALLFEDIQLDKWDRLLSGWRINKRLKLGELSTGMLMKVKIGGVLARKAKVYLYDEPFANIDIMA RSEVMKAIISETEPDVITIISSHHLEGTEKLYNKLWLIKEGTLKIIETEDYREETGNSLIDFYKEEMNK >Mature_229_residues MLVGNNIAKSYPNKLVLQNLDFEAKPGDMIVLTGENGSGKTTLLDMLANLKKPDSGTLELDNEVFAANNIRQHIAYLNNE LYAKKSITIEEFMKQHALLFEDIQLDKWDRLLSGWRINKRLKLGELSTGMLMKVKIGGVLARKAKVYLYDEPFANIDIMA RSEVMKAIISETEPDVITIISSHHLEGTEKLYNKLWLIKEGTLKIIETEDYREETGNSLIDFYKEEMNK
Specific function: Part Of The Binding-Protein-Dependent Transport System For Glutamine. Probably Responsible For Energy Coupling To The Transport System. [C]
COG id: COG1131
COG function: function code V; ABC-type multidrug transport system, ATPase component
Gene ontology:
Cell location: Inner Membrane-Associated [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transporter domain [H]
Homologues:
Organism=Homo sapiens, GI27881501, Length=223, Percent_Identity=25.5605381165919, Blast_Score=76, Evalue=3e-14, Organism=Homo sapiens, GI30795238, Length=223, Percent_Identity=25.5605381165919, Blast_Score=75, Evalue=4e-14, Organism=Homo sapiens, GI31657092, Length=214, Percent_Identity=24.7663551401869, Blast_Score=71, Evalue=9e-13, Organism=Homo sapiens, GI27436953, Length=202, Percent_Identity=25.2475247524752, Blast_Score=69, Evalue=4e-12, Organism=Homo sapiens, GI153792144, Length=213, Percent_Identity=27.2300469483568, Blast_Score=67, Evalue=1e-11, Organism=Homo sapiens, GI45446740, Length=225, Percent_Identity=25.3333333333333, Blast_Score=67, Evalue=1e-11, Organism=Homo sapiens, GI47078218, Length=225, Percent_Identity=25.3333333333333, Blast_Score=67, Evalue=1e-11, Organism=Escherichia coli, GI1787029, Length=216, Percent_Identity=27.7777777777778, Blast_Score=73, Evalue=2e-14, Organism=Escherichia coli, GI1788225, Length=220, Percent_Identity=24.5454545454545, Blast_Score=70, Evalue=8e-14, Organism=Escherichia coli, GI1789593, Length=212, Percent_Identity=24.0566037735849, Blast_Score=68, Evalue=6e-13, Organism=Escherichia coli, GI1789672, Length=221, Percent_Identity=24.8868778280543, Blast_Score=67, Evalue=8e-13, Organism=Escherichia coli, GI1788165, Length=155, Percent_Identity=26.4516129032258, Blast_Score=66, Evalue=2e-12, Organism=Escherichia coli, GI87081782, Length=218, Percent_Identity=28.8990825688073, Blast_Score=66, Evalue=2e-12, Organism=Escherichia coli, GI1786319, Length=212, Percent_Identity=24.5283018867925, Blast_Score=66, Evalue=2e-12, Organism=Escherichia coli, GI1787089, Length=222, Percent_Identity=24.7747747747748, Blast_Score=64, Evalue=6e-12, Organism=Escherichia coli, GI1790739, Length=213, Percent_Identity=26.2910798122066, Blast_Score=64, Evalue=7e-12, Organism=Escherichia coli, GI1788761, Length=247, Percent_Identity=23.0769230769231, Blast_Score=64, Evalue=8e-12, Organism=Escherichia coli, GI1787105, Length=198, Percent_Identity=27.7777777777778, Blast_Score=64, Evalue=8e-12, Organism=Escherichia coli, GI48995001, Length=211, Percent_Identity=23.696682464455, Blast_Score=64, Evalue=9e-12, Organism=Escherichia coli, GI1789991, Length=210, Percent_Identity=24.7619047619048, Blast_Score=64, Evalue=1e-11, Organism=Escherichia coli, GI1788210, Length=208, Percent_Identity=24.5192307692308, Blast_Score=63, Evalue=2e-11, Organism=Escherichia coli, GI87081709, Length=236, Percent_Identity=24.1525423728814, Blast_Score=62, Evalue=2e-11, Organism=Escherichia coli, GI1788472, Length=220, Percent_Identity=22.7272727272727, Blast_Score=62, Evalue=3e-11, Organism=Escherichia coli, GI1786563, Length=218, Percent_Identity=22.9357798165138, Blast_Score=60, Evalue=9e-11, Organism=Escherichia coli, GI1787792, Length=214, Percent_Identity=23.3644859813084, Blast_Score=60, Evalue=9e-11, Organism=Caenorhabditis elegans, GI115533608, Length=216, Percent_Identity=25, Blast_Score=65, Evalue=3e-11, Organism=Drosophila melanogaster, GI24666092, Length=218, Percent_Identity=27.9816513761468, Blast_Score=73, Evalue=2e-13, Organism=Drosophila melanogaster, GI221512771, Length=219, Percent_Identity=25.5707762557078, Blast_Score=69, Evalue=2e-12, Organism=Drosophila melanogaster, GI24643674, Length=227, Percent_Identity=26.431718061674, Blast_Score=67, Evalue=1e-11, Organism=Drosophila melanogaster, GI116007328, Length=204, Percent_Identity=25.4901960784314, Blast_Score=66, Evalue=2e-11, Organism=Drosophila melanogaster, GI28574150, Length=204, Percent_Identity=25.4901960784314, Blast_Score=65, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003439 - InterPro: IPR003593 [H]
Pfam domain/function: PF00005 ABC_tran [H]
EC number: NA
Molecular weight: Translated: 26141; Mature: 26141
Theoretical pI: Translated: 5.45; Mature: 5.45
Prosite motif: PS50893 ABC_TRANSPORTER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLVGNNIAKSYPNKLVLQNLDFEAKPGDMIVLTGENGSGKTTLLDMLANLKKPDSGTLEL CCCCCCHHHHCCCEEEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHCCCCCCCCEEE DNEVFAANNIRQHIAYLNNELYAKKSITIEEFMKQHALLFEDIQLDKWDRLLSGWRINKR CCCEEEHHHHHHHHHHHCCHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCE LKLGELSTGMLMKVKIGGVLARKAKVYLYDEPFANIDIMARSEVMKAIISETEPDVITII EEECCCCCCEEEEEEECCEEEECEEEEEEECCCCCEEEEHHHHHHHHHHCCCCCCEEEEE SSHHLEGTEKLYNKLWLIKEGTLKIIETEDYREETGNSLIDFYKEEMNK ECCCCCHHHHHHHHEEEEECCCEEEEECCHHHHHHCCHHHHHHHHHHCC >Mature Secondary Structure MLVGNNIAKSYPNKLVLQNLDFEAKPGDMIVLTGENGSGKTTLLDMLANLKKPDSGTLEL CCCCCCHHHHCCCEEEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHCCCCCCCCEEE DNEVFAANNIRQHIAYLNNELYAKKSITIEEFMKQHALLFEDIQLDKWDRLLSGWRINKR CCCEEEHHHHHHHHHHHCCHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCE LKLGELSTGMLMKVKIGGVLARKAKVYLYDEPFANIDIMARSEVMKAIISETEPDVITII EEECCCCCCEEEEEEECCEEEECEEEEEEECCCCCEEEEHHHHHHHHHHCCCCCCEEEEE SSHHLEGTEKLYNKLWLIKEGTLKIIETEDYREETGNSLIDFYKEEMNK ECCCCCHHHHHHHHEEEEECCCEEEEECCHHHHHHCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-glutamine [Periplasm]; H2O [C]
Specific reaction: ATP + L-glutamine [Periplasm] + H2O = ADP + phosphate + L-glutamine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8969498; 9384377 [H]