| Definition | Listeria welshimeri serovar 6b str. SLCC5334, complete genome. |
|---|---|
| Accession | NC_008555 |
| Length | 2,814,130 |
Click here to switch to the map view.
The map label for this gene is 116872057
Identifier: 116872057
GI number: 116872057
Start: 670578
End: 671192
Strand: Direct
Name: 116872057
Synonym: lwe0637
Alternate gene names: NA
Gene position: 670578-671192 (Clockwise)
Preceding gene: 116872056
Following gene: 116872058
Centisome position: 23.83
GC content: 31.71
Gene sequence:
>615_bases ATGAATAGAAAAAAATTTACGATACTTGGAATTATAGTAGTGCTTTTATTAAGTATCGGAGGTTATATGACATATCAGAA AATGAAGCCAAAACCTTATAAGGAAGTGGCTGCGGAGGCTAAGACAGATAGTTTTGATAGCGAAGAAGAACTTAGTAAAG CAAGTAACGTGATTGTTATTGGTTCACTGAATAAGCGAGGCCAATCCCAAGTTGATCGCGATACAGAAGGCGGGGTTTTA GCTGTTTATAGAATGTCTGATTTTAAGATAGCACAAGTTATAAAAAATGATACTAATAAAAGCTTAGCTGAAGATACTAT TATACCAATATATGAAAATGAAGGGCATGACGAAAAAACAAATACGACTTATCATGTTGCTGGTTATGAAAAAATGGAAA ATAATGAAACCTATATGTTGTTTTTAACTTATGACCCAGAAGACAAATATTATGTTCCAGTAGGAGTTAATTACGGAAAA ATGAATGTTGATAGTGAAAAAGAAACGGAATTATATGGTGATGATAGTGATAATCAGGAAGAAGAGATTAATAAAGTACA AGAAGAGGCATTAGACACTTATAAAGAAGAAATTAAAGAAGTAGAAAATCAATGA
Upstream 100 bases:
>100_bases AGTTATGAGAGCTCTAAATTTTAATCAAAAAGCGTATCCGTTAGCTGATGATAAAAAAGGTATAAATGCTAAATACTAAT TTTAAATGGAGGTTCTTGTT
Downstream 100 bases:
>100_bases TAAAAAAGAGCAACTTAATGAGTCGTTTTCGATAATTTGTTGACTGTTCCTAAAATAAATTTAAATCTCAATAATATCGA TTTCAATATTATTAGAACCT
Product: putative secreted protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 204; Mature: 204
Protein sequence:
>204_residues MNRKKFTILGIIVVLLLSIGGYMTYQKMKPKPYKEVAAEAKTDSFDSEEELSKASNVIVIGSLNKRGQSQVDRDTEGGVL AVYRMSDFKIAQVIKNDTNKSLAEDTIIPIYENEGHDEKTNTTYHVAGYEKMENNETYMLFLTYDPEDKYYVPVGVNYGK MNVDSEKETELYGDDSDNQEEEINKVQEEALDTYKEEIKEVENQ
Sequences:
>Translated_204_residues MNRKKFTILGIIVVLLLSIGGYMTYQKMKPKPYKEVAAEAKTDSFDSEEELSKASNVIVIGSLNKRGQSQVDRDTEGGVL AVYRMSDFKIAQVIKNDTNKSLAEDTIIPIYENEGHDEKTNTTYHVAGYEKMENNETYMLFLTYDPEDKYYVPVGVNYGK MNVDSEKETELYGDDSDNQEEEINKVQEEALDTYKEEIKEVENQ >Mature_204_residues MNRKKFTILGIIVVLLLSIGGYMTYQKMKPKPYKEVAAEAKTDSFDSEEELSKASNVIVIGSLNKRGQSQVDRDTEGGVL AVYRMSDFKIAQVIKNDTNKSLAEDTIIPIYENEGHDEKTNTTYHVAGYEKMENNETYMLFLTYDPEDKYYVPVGVNYGK MNVDSEKETELYGDDSDNQEEEINKVQEEALDTYKEEIKEVENQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23347; Mature: 23347
Theoretical pI: Translated: 4.28; Mature: 4.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNRKKFTILGIIVVLLLSIGGYMTYQKMKPKPYKEVAAEAKTDSFDSEEELSKASNVIVI CCCCHHHHHHHHHHHHHHHCCCEEECCCCCCCHHHHHHHHCCCCCCCHHHHHHHCCEEEE GSLNKRGQSQVDRDTEGGVLAVYRMSDFKIAQVIKNDTNKSLAEDTIIPIYENEGHDEKT ECCCCCCCHHCCCCCCCCEEEEEEECCCHHHHHHHCCCCCHHHCCCEEEEECCCCCCCCC NTTYHVAGYEKMENNETYMLFLTYDPEDKYYVPVGVNYGKMNVDSEKETELYGDDSDNQE CCEEEEECHHCCCCCCEEEEEEEECCCCCEEEEEECCCCCCCCCCCCCCEECCCCCCCHH EEINKVQEEALDTYKEEIKEVENQ HHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MNRKKFTILGIIVVLLLSIGGYMTYQKMKPKPYKEVAAEAKTDSFDSEEELSKASNVIVI CCCCHHHHHHHHHHHHHHHCCCEEECCCCCCCHHHHHHHHCCCCCCCHHHHHHHCCEEEE GSLNKRGQSQVDRDTEGGVLAVYRMSDFKIAQVIKNDTNKSLAEDTIIPIYENEGHDEKT ECCCCCCCHHCCCCCCCCEEEEEEECCCHHHHHHHCCCCCHHHCCCEEEEECCCCCCCCC NTTYHVAGYEKMENNETYMLFLTYDPEDKYYVPVGVNYGKMNVDSEKETELYGDDSDNQE CCEEEEECHHCCCCCCEEEEEEEECCCCCEEEEEECCCCCCCCCCCCCCEECCCCCCCHH EEINKVQEEALDTYKEEIKEVENQ HHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA