| Definition | Listeria welshimeri serovar 6b str. SLCC5334, complete genome. |
|---|---|
| Accession | NC_008555 |
| Length | 2,814,130 |
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The map label for this gene is secA-2 [H]
Identifier: 116871970
GI number: 116871970
Start: 585811
End: 588141
Strand: Direct
Name: secA-2 [H]
Synonym: lwe0550
Alternate gene names: 116871970
Gene position: 585811-588141 (Clockwise)
Preceding gene: 116871967
Following gene: 116871971
Centisome position: 20.82
GC content: 37.54
Gene sequence:
>2331_bases ATGAAACAAAACTTTGATGACCGTAAAATTGTAAAACAATATCGTGAAATTGCCCGCCAAATCGTAAAAAAAGAAGGCTT ATATAAAAATATGGATCAAGATGAACTTCGCGAACAAACTAATTATTGGCGTGAAAAGTTCAAAACAAAAGAAATGTCCG AACGAGACAAAATTAATATTTTCGCATTAGCAAGAGAAGCTGCAAGTCGAATTATCGGACTAGATGCAGTAGTCGTTCAA TTAATTGGTGCGCTTGTTCTTGGTGATGGTAAAGTGGCAGAAATGAAAACCGGTGAAGGTAAAACATTAATGTCTTTATT TGTGATGTTTATTGAAGTAATGCGCGGAAACCGTGTCCACCTTGTAACAGCAAATGAATATTTAGCAAGACGGGACCGCG AAGAAATTGGTCAAGTTTTAGAGTATCTAGGGATTTCTGTAGCACTAAATGAATCTGATTTAGATAAAGACCAAAAGAAA GCAATTTACACAGCAGATGTCATTTATGGAACTGCTTCTGAATTTGGATTTGATTATTTACGTGATAATATGGTGCGCCA AAAAGAAGATAAAGTACAAAGCGGACTGGATTTTGTTTTGATTGATGAAGCGGATTCTATTTTAATTGACGAAGCTAGAA CACCTCTGCTTATTTCTGATCGGAAAGAAGAAGATTTATCTCTTTATCAAACAGCGAATAAGCTTGTGAAAACTATGCTG AAAGATGAATATGAGATTGAAGAACATAAACGTTTTGTTTGGTTAAACGATGCAGGAATTGAAAAAGCACAGAAATTTTG GGGTGTAGAGTCACTTTATTCTGCGGAAGGGCAAGCTGAACTTCGAATTACGATGCTTTTGATGCGTGCACACTTTTTAA TGCACAAAGATAAAGACTATGTTGTTCTGGATGATGAAGTGTTAATTATCGATCCGCATACTGGTCGCGCGCTTCCAGGT CGCCGTTTTAATGATGGACTTCATCAAGCAATTGAAGCGAAAGAAGAGGTCGAAGTAAAAGAAGAGTCACGAACGCTTGC GACAATCACTATCCAAAACTACTTCCGGATGTATAAAAAGATTTCCGGGATGACAGGAACTGCCAAAACAGAAGAAGAAG AATTTCGTCAAATTTATAATATGGATGTTGTTGTTATCCCAACGAATTTACGAATTAATCGTGAAGATGTGCCAGATGAT ATTTTTTATACAAAAAAAGAAAAAGGTCGAGCGATTGTTTATGAAGTATCATGGCGCTATGAAAAAGGTCAACCCACTTT AATCGGAACTTCCTCCATAAAGAGCAATGAATGGATTAGCGGCTTGCTTGATGCGGCAGGAATTCCACATCAAGTTTTAA ATGCCAAAAATCATGCTCAGGAAGCAGAAATAATTGCAAAAGCTGGTAAACGTGGCATGGTTACCTTGGCTACAAACATG GCAGGTCGTGGAACGGATATTAAATTAGATCCGGATGTTCATAAACTTGGTGGACTTGCAGTAATTGGTACTGAACGCCA TGAAAGCCGTCGTATTGATTTGCAGTTGATGGGACGTTCAGGTAGACGTGGAGATCCAGGTTTTAGTAAATTTATGATTT CTTTAGAGGATGATTTATTAGAACAATTTGAAAGTAAAAGCTGGGAAAAGCTCTCTGTAAAACTAAAACGAAAAGCACCA CGAGATGGAAAGCCTGTTAATTCGAGTAAAATTCATGCGGTTGTCGTTAACGCTCAAAAACGGCTTGAAGGTGCCAATTA CGACATTCGTAAAGATTTACTTTCTTATGATGAAGTAATTGATTTACAACGGAAGATGGTCTATAAAGAACGTGATTTAC TACTAGAGAGAAATAAACTCGGCGTTTCCTCTGAGAAAATTCTTCGTGAAGTTGCGGAATATGCCTTTATTCATCCAGTA GATATTGAACAAGAAAAACTAGAGAAATATTATGCTCGTCAAAAAGAATTGCTTGGCGGGACAAAATTCCCTGTTTCCTT TGATGAAGTATCTTTAATGGAACCAGCAGAAGTAGTAGAAAAAATTGTTACTTGGCACAAAAAAGAACGTGATAAGTTCC CAATTGAAACTATAACAGCCATTGAAAAAGAAGTGTATTTGAACTTGATGGACCAGATGTGGGTTATGCACCTCGATGCA ATGGTACAACTACGGGAAGGGATCCATTTACGCGCTTATGGGCAGCAGGATCCCCTTGTGATGTATCAAAAAGAGGGAGC TCAATTATTTGAAAAATTCCAAGCTGATTATCATTTTTATTTCGCGCATGCGTTGCTCGAACTTGATCCAGATGGATTGG TGCAAGGATAA
Upstream 100 bases:
>100_bases AATATAAAAAAAGGTAGTTTTTCCACTTTTACTCACTTGAAATGAATTGCCAGATGACTTTATGGTATTCTATAATAGAA GGTATGGAGGATGTTATATA
Downstream 100 bases:
>100_bases GATTACAACTTGCGCCTGATTTTTTTCGATTTTATGGGTAAAATAGTGAGAACTGGGGTATTAACCTATATAATAGTAAC TAAAGAAAAATAAATAAAAA
Product: preprotein translocase subunit SecA
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 776; Mature: 776
Protein sequence:
>776_residues MKQNFDDRKIVKQYREIARQIVKKEGLYKNMDQDELREQTNYWREKFKTKEMSERDKINIFALAREAASRIIGLDAVVVQ LIGALVLGDGKVAEMKTGEGKTLMSLFVMFIEVMRGNRVHLVTANEYLARRDREEIGQVLEYLGISVALNESDLDKDQKK AIYTADVIYGTASEFGFDYLRDNMVRQKEDKVQSGLDFVLIDEADSILIDEARTPLLISDRKEEDLSLYQTANKLVKTML KDEYEIEEHKRFVWLNDAGIEKAQKFWGVESLYSAEGQAELRITMLLMRAHFLMHKDKDYVVLDDEVLIIDPHTGRALPG RRFNDGLHQAIEAKEEVEVKEESRTLATITIQNYFRMYKKISGMTGTAKTEEEEFRQIYNMDVVVIPTNLRINREDVPDD IFYTKKEKGRAIVYEVSWRYEKGQPTLIGTSSIKSNEWISGLLDAAGIPHQVLNAKNHAQEAEIIAKAGKRGMVTLATNM AGRGTDIKLDPDVHKLGGLAVIGTERHESRRIDLQLMGRSGRRGDPGFSKFMISLEDDLLEQFESKSWEKLSVKLKRKAP RDGKPVNSSKIHAVVVNAQKRLEGANYDIRKDLLSYDEVIDLQRKMVYKERDLLLERNKLGVSSEKILREVAEYAFIHPV DIEQEKLEKYYARQKELLGGTKFPVSFDEVSLMEPAEVVEKIVTWHKKERDKFPIETITAIEKEVYLNLMDQMWVMHLDA MVQLREGIHLRAYGQQDPLVMYQKEGAQLFEKFQADYHFYFAHALLELDPDGLVQG
Sequences:
>Translated_776_residues MKQNFDDRKIVKQYREIARQIVKKEGLYKNMDQDELREQTNYWREKFKTKEMSERDKINIFALAREAASRIIGLDAVVVQ LIGALVLGDGKVAEMKTGEGKTLMSLFVMFIEVMRGNRVHLVTANEYLARRDREEIGQVLEYLGISVALNESDLDKDQKK AIYTADVIYGTASEFGFDYLRDNMVRQKEDKVQSGLDFVLIDEADSILIDEARTPLLISDRKEEDLSLYQTANKLVKTML KDEYEIEEHKRFVWLNDAGIEKAQKFWGVESLYSAEGQAELRITMLLMRAHFLMHKDKDYVVLDDEVLIIDPHTGRALPG RRFNDGLHQAIEAKEEVEVKEESRTLATITIQNYFRMYKKISGMTGTAKTEEEEFRQIYNMDVVVIPTNLRINREDVPDD IFYTKKEKGRAIVYEVSWRYEKGQPTLIGTSSIKSNEWISGLLDAAGIPHQVLNAKNHAQEAEIIAKAGKRGMVTLATNM AGRGTDIKLDPDVHKLGGLAVIGTERHESRRIDLQLMGRSGRRGDPGFSKFMISLEDDLLEQFESKSWEKLSVKLKRKAP RDGKPVNSSKIHAVVVNAQKRLEGANYDIRKDLLSYDEVIDLQRKMVYKERDLLLERNKLGVSSEKILREVAEYAFIHPV DIEQEKLEKYYARQKELLGGTKFPVSFDEVSLMEPAEVVEKIVTWHKKERDKFPIETITAIEKEVYLNLMDQMWVMHLDA MVQLREGIHLRAYGQQDPLVMYQKEGAQLFEKFQADYHFYFAHALLELDPDGLVQG >Mature_776_residues MKQNFDDRKIVKQYREIARQIVKKEGLYKNMDQDELREQTNYWREKFKTKEMSERDKINIFALAREAASRIIGLDAVVVQ LIGALVLGDGKVAEMKTGEGKTLMSLFVMFIEVMRGNRVHLVTANEYLARRDREEIGQVLEYLGISVALNESDLDKDQKK AIYTADVIYGTASEFGFDYLRDNMVRQKEDKVQSGLDFVLIDEADSILIDEARTPLLISDRKEEDLSLYQTANKLVKTML KDEYEIEEHKRFVWLNDAGIEKAQKFWGVESLYSAEGQAELRITMLLMRAHFLMHKDKDYVVLDDEVLIIDPHTGRALPG RRFNDGLHQAIEAKEEVEVKEESRTLATITIQNYFRMYKKISGMTGTAKTEEEEFRQIYNMDVVVIPTNLRINREDVPDD IFYTKKEKGRAIVYEVSWRYEKGQPTLIGTSSIKSNEWISGLLDAAGIPHQVLNAKNHAQEAEIIAKAGKRGMVTLATNM AGRGTDIKLDPDVHKLGGLAVIGTERHESRRIDLQLMGRSGRRGDPGFSKFMISLEDDLLEQFESKSWEKLSVKLKRKAP RDGKPVNSSKIHAVVVNAQKRLEGANYDIRKDLLSYDEVIDLQRKMVYKERDLLLERNKLGVSSEKILREVAEYAFIHPV DIEQEKLEKYYARQKELLGGTKFPVSFDEVSLMEPAEVVEKIVTWHKKERDKFPIETITAIEKEVYLNLMDQMWVMHLDA MVQLREGIHLRAYGQQDPLVMYQKEGAQLFEKFQADYHFYFAHALLELDPDGLVQG
Specific function: Part of the Sec protein translocase complex. Interacts with the secYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular mo
COG id: COG0653
COG function: function code U; Preprotein translocase subunit SecA (ATPase, RNA helicase)
Gene ontology:
Cell location: Cell membrane; Peripheral membrane protein; Cytoplasmic side. Cytoplasm (By similarity). Note=Distribution is 50-50 (By similarity) [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the secA family [H]
Homologues:
Organism=Escherichia coli, GI1786287, Length=801, Percent_Identity=39.0761548064919, Blast_Score=547, Evalue=1e-157,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000185 - InterPro: IPR011115 - InterPro: IPR014018 - InterPro: IPR011130 - InterPro: IPR011116 [H]
Pfam domain/function: PF07517 SecA_DEAD; PF01043 SecA_PP_bind; PF07516 SecA_SW [H]
EC number: NA
Molecular weight: Translated: 89504; Mature: 89504
Theoretical pI: Translated: 5.84; Mature: 5.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKQNFDDRKIVKQYREIARQIVKKEGLYKNMDQDELREQTNYWREKFKTKEMSERDKINI CCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEH FALAREAASRIIGLDAVVVQLIGALVLGDGKVAEMKTGEGKTLMSLFVMFIEVMRGNRVH EEEHHHHHHHHHHHHHHHHHHHHHHEECCCCEEEECCCCCHHHHHHHHHHHHHHCCCEEE LVTANEYLARRDREEIGQVLEYLGISVALNESDLDKDQKKAIYTADVIYGTASEFGFDYL EEECHHHHHHCCHHHHHHHHHHHCCEEEECCCCCCCHHHHEEEEEHHEEECHHHHHHHHH RDNMVRQKEDKVQSGLDFVLIDEADSILIDEARTPLLISDRKEEDLSLYQTANKLVKTML HHHHHHHHHHHHHCCCCEEEECCCCCEEEECCCCCEEECCCCCHHHHHHHHHHHHHHHHH KDEYEIEEHKRFVWLNDAGIEKAQKFWGVESLYSAEGQAELRITMLLMRAHFLMHKDKDY HCCCCHHHCCEEEEEECCCHHHHHHHHCHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCE VVLDDEVLIIDPHTGRALPGRRFNDGLHQAIEAKEEVEVKEESRTLATITIQNYFRMYKK EEECCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEHHHHHHHHHH ISGMTGTAKTEEEEFRQIYNMDVVVIPTNLRINREDVPDDIFYTKKEKGRAIVYEVSWRY HCCCCCCCCCCHHHHHHHHCCCEEEECCCEEECCCCCCCCCEEEECCCCCEEEEEEEEEE EKGQPTLIGTSSIKSNEWISGLLDAAGIPHQVLNAKNHAQEAEIIAKAGKRGMVTLATNM ECCCCEEEECCCCCCCHHHHHHHHHCCCCHHHHCCCCHHHHHHHHHHCCCCCEEEEEECC AGRGTDIKLDPDVHKLGGLAVIGTERHESRRIDLQLMGRSGRRGDPGFSKFMISLEDDLL CCCCCCEEECCCHHHHCCEEEEECCCCCCCEEEEEEECCCCCCCCCCHHHHEEEHHHHHH EQFESKSWEKLSVKLKRKAPRDGKPVNSSKIHAVVVNAQKRLEGANYDIRKDLLSYDEVI HHHHCCCHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEHHHHCCCCCCHHHHHHHHHHHHH DLQRKMVYKERDLLLERNKLGVSSEKILREVAEYAFIHPVDIEQEKLEKYYARQKELLGG HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCC TKFPVSFDEVSLMEPAEVVEKIVTWHKKERDKFPIETITAIEKEVYLNLMDQMWVMHLDA CCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH MVQLREGIHLRAYGQQDPLVMYQKEGAQLFEKFQADYHFYFAHALLELDPDGLVQG HHHHHCCCEEEEECCCCCEEEEEHHHHHHHHHHHHCHHHEEEHHHHHCCCCCCCCC >Mature Secondary Structure MKQNFDDRKIVKQYREIARQIVKKEGLYKNMDQDELREQTNYWREKFKTKEMSERDKINI CCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEH FALAREAASRIIGLDAVVVQLIGALVLGDGKVAEMKTGEGKTLMSLFVMFIEVMRGNRVH EEEHHHHHHHHHHHHHHHHHHHHHHEECCCCEEEECCCCCHHHHHHHHHHHHHHCCCEEE LVTANEYLARRDREEIGQVLEYLGISVALNESDLDKDQKKAIYTADVIYGTASEFGFDYL EEECHHHHHHCCHHHHHHHHHHHCCEEEECCCCCCCHHHHEEEEEHHEEECHHHHHHHHH RDNMVRQKEDKVQSGLDFVLIDEADSILIDEARTPLLISDRKEEDLSLYQTANKLVKTML HHHHHHHHHHHHHCCCCEEEECCCCCEEEECCCCCEEECCCCCHHHHHHHHHHHHHHHHH KDEYEIEEHKRFVWLNDAGIEKAQKFWGVESLYSAEGQAELRITMLLMRAHFLMHKDKDY HCCCCHHHCCEEEEEECCCHHHHHHHHCHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCE VVLDDEVLIIDPHTGRALPGRRFNDGLHQAIEAKEEVEVKEESRTLATITIQNYFRMYKK EEECCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEHHHHHHHHHH ISGMTGTAKTEEEEFRQIYNMDVVVIPTNLRINREDVPDDIFYTKKEKGRAIVYEVSWRY HCCCCCCCCCCHHHHHHHHCCCEEEECCCEEECCCCCCCCCEEEECCCCCEEEEEEEEEE EKGQPTLIGTSSIKSNEWISGLLDAAGIPHQVLNAKNHAQEAEIIAKAGKRGMVTLATNM ECCCCEEEECCCCCCCHHHHHHHHHCCCCHHHHCCCCHHHHHHHHHHCCCCCEEEEEECC AGRGTDIKLDPDVHKLGGLAVIGTERHESRRIDLQLMGRSGRRGDPGFSKFMISLEDDLL CCCCCCEEECCCHHHHCCEEEEECCCCCCCEEEEEEECCCCCCCCCCHHHHEEEHHHHHH EQFESKSWEKLSVKLKRKAPRDGKPVNSSKIHAVVVNAQKRLEGANYDIRKDLLSYDEVI HHHHCCCHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEHHHHCCCCCCHHHHHHHHHHHHH DLQRKMVYKERDLLLERNKLGVSSEKILREVAEYAFIHPVDIEQEKLEKYYARQKELLGG HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCC TKFPVSFDEVSLMEPAEVVEKIVTWHKKERDKFPIETITAIEKEVYLNLMDQMWVMHLDA CCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH MVQLREGIHLRAYGQQDPLVMYQKEGAQLFEKFQADYHFYFAHALLELDPDGLVQG HHHHHCCCEEEEECCCCCEEEEEHHHHHHHHHHHHCHHHEEEHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11679669 [H]