| Definition | Listeria welshimeri serovar 6b str. SLCC5334, complete genome. |
|---|---|
| Accession | NC_008555 |
| Length | 2,814,130 |
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The map label for this gene is 116871958
Identifier: 116871958
GI number: 116871958
Start: 570810
End: 571841
Strand: Direct
Name: 116871958
Synonym: lwe0538
Alternate gene names: NA
Gene position: 570810-571841 (Clockwise)
Preceding gene: 116871956
Following gene: 116871960
Centisome position: 20.28
GC content: 34.01
Gene sequence:
>1032_bases ATGCCAGATTTTTCTTACGCGAAAATTACGAAGCTCGTGGTCCATTTTGCTGGAAATAAAGCGAGAGAAGAGGGAACAGA AGTCTCGGCGAATGTGCTCGCTGATATTGGTTCAGAAATGAATCAAACGCTAGCTTCTATTTTCTTAGAGCCATTTACAA AAGATGAATATTTTAAGTTTACGCATGAAACTGATTTGGACTTTAATGAAGTCCGTACTTTTGCTAGCAACATGTTTCTC CAAGAGGAGGAATTTTTGGATGAATCCAAGAAAATTCTAGAACATTTATATAGCGAAACAACCCACCCGAATATTAAAAG TGGTGATGTATGGATTTTCTTTATTGAGGGTTGTGTAGTTGATGGAGATTTTACGAATGGTATAGGAATTTTCAAAGTCG AAAACAAAGAAGTCTTTCTAAAAAATGATTTTAACGGCAGAGAATTTCAAATTGGTTATGATAAAGGTATTACCGGAACA GATTTAGATAAAGGTTGTTTGATTTTTAATGTAGATCATGACACGGGAAATAAAGTCCTAATTTTGGACCGGCTGAACCG TGGTGATTCTGTTTATTGGAAAGATAAATTTTTAAGCATTGATAAAATAACAGACGAGAAATTTTATACAGAAGGATTTG TAGAAGTTTGTACAGATTACATAAAGCAACGGGAGGAGTCACTACTTGATAAATCTAATTTTGTTAAAGCGACAACGGAA TATTTAGCTGGAGAAGAAACGTTGAACATTGCTGAATTTGCTCGTACAACGATTGAAAAACCGGAAGAAATTACCGAATT TAACACGATGATCGATACGTTTGAGCGTGAAAATAATGTCCGTTTTCCAGAAACTTTTCAGTTAGATGAAGAAAAACGCG AAAAATTATCAAAAAAAATCCGCAAAACGATTAAACTAGGCAAAAATATTTCCGTTGTCGTGAAAGACTTAGAACAACTA GAAGAAACAGATTTTGTCCAAGGATACGACGAAGAAAAAGGGAAAAATTACATGATTGTTTATTATGATTAA
Upstream 100 bases:
>100_bases AACTTCAAAATCTGCTGGAATCATGACGTACCTCCATTTGTTTATAATAAATTTAGTATACAGGAAATACCTATTTTATA AAAGTTAGGATGATAAAGGA
Downstream 100 bases:
>100_bases AATAAAAAACCGAGGATGCGGAATCCCCGGTTTTCTGCTGTCTAAACGACAAACATAAAGTACAATATAAACAGCAACAT CATCACATACATAATTGGAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 343; Mature: 342
Protein sequence:
>343_residues MPDFSYAKITKLVVHFAGNKAREEGTEVSANVLADIGSEMNQTLASIFLEPFTKDEYFKFTHETDLDFNEVRTFASNMFL QEEEFLDESKKILEHLYSETTHPNIKSGDVWIFFIEGCVVDGDFTNGIGIFKVENKEVFLKNDFNGREFQIGYDKGITGT DLDKGCLIFNVDHDTGNKVLILDRLNRGDSVYWKDKFLSIDKITDEKFYTEGFVEVCTDYIKQREESLLDKSNFVKATTE YLAGEETLNIAEFARTTIEKPEEITEFNTMIDTFERENNVRFPETFQLDEEKREKLSKKIRKTIKLGKNISVVVKDLEQL EETDFVQGYDEEKGKNYMIVYYD
Sequences:
>Translated_343_residues MPDFSYAKITKLVVHFAGNKAREEGTEVSANVLADIGSEMNQTLASIFLEPFTKDEYFKFTHETDLDFNEVRTFASNMFL QEEEFLDESKKILEHLYSETTHPNIKSGDVWIFFIEGCVVDGDFTNGIGIFKVENKEVFLKNDFNGREFQIGYDKGITGT DLDKGCLIFNVDHDTGNKVLILDRLNRGDSVYWKDKFLSIDKITDEKFYTEGFVEVCTDYIKQREESLLDKSNFVKATTE YLAGEETLNIAEFARTTIEKPEEITEFNTMIDTFERENNVRFPETFQLDEEKREKLSKKIRKTIKLGKNISVVVKDLEQL EETDFVQGYDEEKGKNYMIVYYD >Mature_342_residues PDFSYAKITKLVVHFAGNKAREEGTEVSANVLADIGSEMNQTLASIFLEPFTKDEYFKFTHETDLDFNEVRTFASNMFLQ EEEFLDESKKILEHLYSETTHPNIKSGDVWIFFIEGCVVDGDFTNGIGIFKVENKEVFLKNDFNGREFQIGYDKGITGTD LDKGCLIFNVDHDTGNKVLILDRLNRGDSVYWKDKFLSIDKITDEKFYTEGFVEVCTDYIKQREESLLDKSNFVKATTEY LAGEETLNIAEFARTTIEKPEEITEFNTMIDTFERENNVRFPETFQLDEEKREKLSKKIRKTIKLGKNISVVVKDLEQLE ETDFVQGYDEEKGKNYMIVYYD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39848; Mature: 39717
Theoretical pI: Translated: 4.37; Mature: 4.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPDFSYAKITKLVVHFAGNKAREEGTEVSANVLADIGSEMNQTLASIFLEPFTKDEYFKF CCCCHHHHHHHHHHHHCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEE THETDLDFNEVRTFASNMFLQEEEFLDESKKILEHLYSETTHPNIKSGDVWIFFIEGCVV ECCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEEEEE DGDFTNGIGIFKVENKEVFLKNDFNGREFQIGYDKGITGTDLDKGCLIFNVDHDTGNKVL CCCCCCCEEEEEECCCEEEEECCCCCCEEEEECCCCCCCCCCCCCEEEEEEECCCCCEEE ILDRLNRGDSVYWKDKFLSIDKITDEKFYTEGFVEVCTDYIKQREESLLDKSNFVKATTE EEEECCCCCEEEEHHHEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHH YLAGEETLNIAEFARTTIEKPEEITEFNTMIDTFERENNVRFPETFQLDEEKREKLSKKI HHCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHH RKTIKLGKNISVVVKDLEQLEETDFVQGYDEEKGKNYMIVYYD HHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEC >Mature Secondary Structure PDFSYAKITKLVVHFAGNKAREEGTEVSANVLADIGSEMNQTLASIFLEPFTKDEYFKF CCCHHHHHHHHHHHHCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEE THETDLDFNEVRTFASNMFLQEEEFLDESKKILEHLYSETTHPNIKSGDVWIFFIEGCVV ECCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEEEEE DGDFTNGIGIFKVENKEVFLKNDFNGREFQIGYDKGITGTDLDKGCLIFNVDHDTGNKVL CCCCCCCEEEEEECCCEEEEECCCCCCEEEEECCCCCCCCCCCCCEEEEEEECCCCCEEE ILDRLNRGDSVYWKDKFLSIDKITDEKFYTEGFVEVCTDYIKQREESLLDKSNFVKATTE EEEECCCCCEEEEHHHEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHH YLAGEETLNIAEFARTTIEKPEEITEFNTMIDTFERENNVRFPETFQLDEEKREKLSKKI HHCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHH RKTIKLGKNISVVVKDLEQLEETDFVQGYDEEKGKNYMIVYYD HHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA